Error message

Warning: shell_exec(): Cannot execute a blank command in include() (line 59 of /var/www/marimba/sites/default/modules/tripal_cvterm/theme/templates/tripal_feature_cvterm.tpl.php).

TCONS_00073271 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073271
Unique NameTCONS_00073271
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1840

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073271 ID=TCONS_00073271|Name=TCONS_00073271|organism=Clytia hemisphaerica|type=transcript|length=1840bp
TGACAGTTGAGCACTATCTTTTGATCGAGCTCCGATGTAGATCGAGTCAC
GATCGCCGTCGACCAAGCAAGGATGTAAACATTCTAGCCTCTCTGCGGAC
ACTTAAATGCCCACTATGTCTGATAGATAGATTCTGATAGAGTTCCAAAC
TGATTGTGAAGACGAGTGAGAAAACGAAAAAACTAAAAGTTTTGTTCATC
TGTTCATtatatATAATGTCGAATGGTCAGGAGGAAAGGGATGGAAATGA
TAATTCATGTACACCAAACATAAGATTTATTTGTTCTTTTGAAGGCGTAC
TAAAGATCATAGAATTTGGAtccattatttttgtaaaaaaccctgaagta
tttttatttattttcttcgtACTGTTCACTGTTCTAATCGCATGGATTAT
TTGTGCTGCTGCATTTGACAACATACAAGGTGGTTACGTCATAAACGTCA
AACCGAGATACATCATTTTTCTCATTATCGGTATCTTTTGCTGGATATGg
gtcatttttgtcattttgtttaATATTTTGGGATGTTTCAATAAATGCAT
TTTCAATCGACTCACAAGATTGTTTGGTTGGCACATCTTTTTATTGGCGT
ATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGATCCATCTTGTTAGCT
TGGCATCACAAATTCTGGAGTGGAAATATCGCAGCATCCATTTTTGGATT
CGTCAActccattttatttttcatcgaTTCAATCATGTATTATCGAAGAT
GTCGAAAATATCGAGTTCAAATTCGAAAAATCCGTCGAGGTTTGATTGAG
AATGAGGAagaggaaatttgaaaaatctaaagATGTATTGATTGCATTTG
TTTCAATATTTACGGAGCTGGTACAAATGGCAATAGCTTTTCCTGTAATG
GAGACAGTTAGTTTATGATTTATCTAGATCCTGACTGATTGTAGATgaca
atagatcttatcggagtttttgatttcttctaaaaaagcgatgcatcgtg
ggattgtttcgggagtattgcAATAGAactccctcgaggaattcctaaga
gctttctattgtaataccatcgaaacaatcccacaatgcatcgctttttt
agaaaaatgaaaaactccgataagatctattaatCAGCACTCTTACCGTT
TTTCAGTTAAAACTTCGAGCTGTTCAACACCGCAAACCTCAAAAGGGTAG
ATACATAACATAAACTCGCTTACCCGTGCAACTGAGAAAGAGTTTAATTA
TCAACTTGTCCTTCCTTTATTAGCCCTGAATTACGCCTTTCCCGAGTCTA
TTATTATAGGGAATATTCCAAACATTAAAGGATGGGATCGTCCCTGATCT
ATTGACGGTAGGTGCAATATGGACAGAAAATAGACTTTAATTTACGGTGC
ATTTTCATAATATTTATCAGAAATTTGTCAGATTTTGCAACAAAAGAATT
CTCACTTATACTACGcctttacagtgcactttctTTCTAACGATCGTTAA
ATTGCACTTTGAGGAGCCTAAAAATGTACCCATAAAGCATTCCCTACTTT
TGAGTGCTCATCCGGGTCAATTACTCTGGAGTTATTACATCGATTGTTat
taattttagtatttttatcactttttgtaGGAAATAATATTTAAATTATA
TGTATACTGTATGTTGTAGttttttgtatacttttttgcaCAATTTTAAT
ACCTTTTTGTTTTTACGTAATTTTTGTTACCACCGTGTATGATATTTAGA
GTTTTCATGCTTAGATATTTAGTAtaatatttaactttttctgTAGATAT
AATATAACAAATTaccaaatatgaaaaattcaaatttctc
Run BLAST on NCBI

protein sequence of TCONS_00073271-protein

>TCONS_00073271-protein ID=TCONS_00073271-protein|Name=TCONS_00073271-protein|organism=Clytia hemisphaerica|type=polypeptide|length=201bp
MSNGQEERDGNDNSCTPNIRFICSFEGVLKIIEFGSIIFVKNPEVFLFIF
FVLFTVLIAWIICAAAFDNIQGGYVINVKPRYIIFLIIGIFCWIWVIFVI
LFNILGCFNKCIFNRLTRLFGWHIFLLAYSLSWLFFWMFGSILLAWHHKF
WSGNIAASIFGFVNSILFFIDSIMYYRRCRKYRVQIRKIRRGLIENEEEE
I
Run BLAST on NCBI

transcript from alignment at scaffold_89:217612..226351-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073271 ID=TCONS_00073271|Name=TCONS_00073271|organism=Clytia hemisphaerica|type=transcript|length=8740bp|location=Sequence derived from alignment at scaffold_89:217612..226351- (Clytia hemisphaerica)
TGACAGTTGAGCACTATCTTTTGATCGAGCTCCGATGTAGATCGAGTCAC GATCGCCGTCGACCAAGCAAGGATGTAAACATTCTAGCCTCTCTGCGGAC ACTTAAATGCCCACTATGTCTGATAGATAGATTCTGATAGAGTTCCAAAC TGATTGTGAAGACGAGTGAGAAAACGAAAAAACTAAAAGTTTTGTTCATC TGTTCATTATATGTAAGTATTTTTTGACTTTTCTATGACTTTTTACAGGG CAATCCTTTTCAACCTTCGATCAGTGATCTATCAACTTGATGAGGTTGAA CTTAAAGCCTGAGGAATTAGCTAGAGAGTGGAATCTTCAATATTTCCTAC AGTAGATAGAGCAAGAATTATATACGCAAGAATAGCTAGTCTTTTCTGGG AGATCGCCACAGTCTTTTGAACATACATACATTTTTAAACCAATTTCATT TATCTTATTTTTGTTAATGCTTTTATATGTCTGTATGTAGGGAGAACAAA CATTTATGTTGTTAACTACTGAAATATATAGATAGATACATTGGGTTAGC CGAACCTAAGTTCAAGAAACGATACGCTAACCACAAGTCATCCTTCGCCA ACGAAAAGTACGAAAAAGAAACTGAACTTTCCAAGGAGATTTGGAGGTTG AAACGAAAGAATCGTGCCCCAAAGATTACTTGGAAGACAGTCCGTAAATG TCCACCGTTCAATCGTGCTTCGCTGGAATGTTCACTCTGCCTTAGCGAAA AATTAGAAATTGCCACATTCGACCAACCTGAGAAACTGTTAAATTCAAGG AATGAACTGATCTCGAAATGTCGGCATGTGAATAAGTTCACCCTCAAACT CCACGACACCAAAGACTGAAATGACGTNATGTAACTGAAAAATCAAAATC TAAGTTCACTAAATCAAAAGTGAATTCCACTACAACTCCCCTAGGCAATA AAATCTATTAAATCTTTATTGTAAGAGTTCTACTTTTATATTCATCTTTG GTTTTCAGTTTTGGTTTTACTTTATTAATCCACAGTGCCTCAAGGGACAT TAAGCATTGTTCAGATTTAATTGTGCGATCTAGAATCATTACATTTTCCA TCAAAATTTCACAATTACAATTTTGAAAATGTCTTCCCACTGGAGTGTTT ACGTTGCGGTGCTCTTTGATCCTGGTAATTAAGTGCCTGGCAGTCTGCCC GACATAGCTCGATTCACACCGAGAACATTTAATAAACAAACCGCGTCATA AAGTTGATTTGTTTTTTTCAACACATCGAATCTCCAATATTTTAATATCA CCACAATTTTCCATATTTGATTGATATTCGATTGTGTTTGATTGAGGTTT GCTTTTGTTTGATTGTCATTCTATCAGATTGTGGAAGTACTTTGATTTGT GAAGTATCTTTACGTCACATAGAACAAAAGAAAATAGCAAAAGAACAAAG GAATTACCAATAGCTACCATTATTTCGGAACCATGATATGGGGAATCGCG ATTTTATGGAAATGGAAATCCTCATATCAAATAAAGCATCTTCTAAAAAA TTTCATTCTTTCCCATAAATGGGAAAATGAAAAACAAAGAAACTTTGAGC CTTTAAGACCAGGGGATGTCAATGGAACTGTTTGATTACCAAACTAATCA AACTTAATCAAATTTAACAGTTGTTTTGGAGAACGCAACGTCCTATTATT GAATAACAAATTACTTCACATACCTTAAAAGAAGAAATTTTGGCGGGAAT TTAATTTGGCGGATGGCCAAAAAAGTTTTTTCAGAGGGAATTTAATTTGG CGGATGGACGAAAAATCTAAATTTAGCGGGAATTTAATTTGGCGGTCGCT TAAAAATTTAACCTTAAGATGGCGTCAAAACAGCAAAAAAATAGCGAAAA CACCTTAAAAGAGATCATATTTTCAAAATGTTTAATTTGGCGGGAATTTA ATTTGGCGGTTGGTGGAAAAAAGAAATTTTGGCAGGAACTTAATTTGGCA GATTTCAGTCAAATCTGCCAAATCCGCCAAATTTTCTTTCAGCCAAAATT TCTTCCTTTAAGGTACATAACTTTCCCTCAGCCAATAAAAATATGATAAA TTATCTTGTCTTTAGGTAACTATTGTGGAGTAATTAGTTATTCAATAGGT CATCGCGTTCTCCAAACAACTATCCAACAATAGGTGTTCAGTTACCAAAC CAACTACTAGAACAGTAATCAAACCAAGAAATTTCGGTAAAGTTCAATGA CTTGTTCGATTGATCTGTTAATTAAAGTTTGATAACTATTCGATTATAGT TTGATAGGTCCGATTGTAATTTGATAGGTTTGATCATAGTTAGACATTCA TTCAATAATAGGCAATTTTCGCAATATATTTGCTACTCTAGTATATAATA CCTGAGAATAGCAGAATGATTACGGAAAAGAACCAAGATACTACTCGAAC ACTCGTCGAACAACTCGAACATACACCGAACAACATCGAACTGTATTTTT AATCTAACTAATCAATATATTTCCACGGTAAAGCTCTATTACTGTTCGAT TTAGTTTGGTAATCAAATGTCCTATCCTTCAAATAAGTTCGATTGAGTTT GATGGTTCGATTAATAAAATTGGTTCGATTGGGTTCGGTTGACATCCCCT GGATAAAAAGAAGTTATAGTCTAAAAACCTGTAGTATTATCATGTATTGG GATGTCCCAAAAAAACCATTACCCCCTGTGGACGACACCGTTTTTTGGAA TTTTTTTTCACTTGGAAATCCTGAGAAATTTTGAAAAAGGTTCCAGAAAA TGCAAGATTTTCCTAATTATTTGGTCATCCCTATCAGAAAATCTAAGATT TTTCCTTAAAAATTCTTGAATGTTACAGAAATCCTGAAGTTTTTTAAAAG TAAATTGTTTGAAATTGAAATCCATTTCCTCCACAGGGGGTAACAGATTA TAACTGGAACCGCCCAATAAACATTATAATATTACACCATAAATCTAGAA ATTTTAATATTTCTGAAATTTATTTTTCTTCAAAAAATTAAAACATTACA GAATGTTTCACGCCAAATACGATCATCAGATGTATGAATAAAAAATTTGA ACAAATTCTACTATGTAAAACATATTAGAAAGTAATTAACAGGCTATAAA AGTCATTAAAAGTAATAAAATTTGAGTTGATTGGCTAAAGAAATATGAAT GGTAAAAATTGTGTCTAGAGAAATAAAATGTATTGATAAGTGCATTGTAA TTTAAATGTTAAAATTATCACACATCTGGGGGGGACTGTTTTGTAATTTT TCAATATAGGAATTTATTTACGTGTTGGCATTTTGAAATCAATTCCGATT TTGTGTTAACGAGCTCACGTTTAGAGGTGATTTATTTATTTAGCTCTACC TTGGTATAGAGCACTTTGTCACCACAAACTACTGAAATTGTTGTTGAAAT TTGAATATCTTGTAAAGTACAAAAGTTGTATCAATGTCAAATTTTGACCA TAGATAGATATTAATGTAAAAAGAACTTTCCTTTCAAAATTTTTGAAATT TTTTATAGCCAAAAATTGAACATGGCTAAAATATGATGTCATCATTAAAA AAAAAAGAATTACAATTTATAGCGTCAAAATTTCATATTGAAATCACAAA TAGTTTTAAGTTTGACGTAATGTTAGGTAGTAATCTTTATGATGTCGTAA TATGTCACAATACAGGTTTTTGGGCTATAACTTCTTGTAGGCTAAAAATC AATTTTTCTAACAGCTATGGAGAACATTATACTTCTTTCCAGCCGTGACA TCATAATAACTTGGTCTTTTTTCAATAAATGCTTTAAAGGGGACGTCTGG TCTGATTTTAGGTATTGTTTTTTTAGAATTTTTGGAAAAATTATTCCAGG GAGATTAAAATGAGCTATCTCACTTCAAGAGATTTTTTTTCTATCACTTT CTATGGCCATTTAAAAAATCCCTCTTTTTCAAAATTTATGACGTAGCTTA TGTTATATGTTTTCTATGTTCTTTCAAGTAAACGAGATTAACTCCTCTTT CTGTGCAGCTGGCATTTTTATAAGAAAATTTTAAGTAAGTCAGAGATGTG CAAGATCATTTAAAGTCGTTAAAACATCTTTTTCCCAACATTTTGTCAAT GAAAGCTTACTCCAACATCTTCATAGAAAACTGAAATATTTATATTGTTG TGGACTGGAAAAATCATCGAAATTAGAAGTTTGAATTAAAATGTTCTTAT CAAAAGTTGTTTAAATACAGTAATTTAGACTACAGACAAGATTTCTGTTC TTATAAATTACGAACAAAGGTTACGTCAAAAATCAGGTAAAAGAGAGGAA ATTGTAAAACACTAAAATCTGAATATGTCAGTCAAAACTAAAGATTTTGA GTTCGTTTTTTCTGCAAAATTTTTTTTACTAATTTAGCTGTCTGGCATAG AATTATGACTGAAATGATCTACCAAAGCAGACGTCCCCTTTAACACTGTT CGTACTAGGGGGTTTCTGTTTGGAAGGGAAACTTTTATGCTAATAGCTCC TGAAATGATAAAGCTTTGGACATGAAATTTTTACATAAGAATTTTCACAC CTTGATATGATGATATTGCTGACATTATGTGTCATAGAAATTGATACAGG TCTAATACAAAATAATTTTTATGTTAAATGTACATATTTATGTTCAAAAC CATTATTTATTGAATATTTAGGATAAAATAAGGCTTTTGTACTGGGGAAC CCTTTTCTACAGTAAGGCCTTTGTTTGTTCACACTCTGGAATATAACTAT GATTTTTTCGGTTTTTTAGATAATGTCGAATGGTCAGGAGGAAAGGGATG GAAATGATAATTCATGTACACCAAACATAAGATTTATTTGTTCTTTTGAA GGCGTACTAAAGATCATAGAATTTGTAAGTGTTTAGAATTTTCAGCAGAG CTTACTCTATCATAAACTAATGAAATGAAAAAAGTCAAACAGGGCCGCCT ATAAAAACTGTGGAAAAGTTTTTGTAGATTAAGTGCCAGTTTGGTTTTCT CTTATTTCAAATAGTGGCTGTTCCTCAACATTATCCAAACCTTTGTCATT GTGGTGCGTTTGAATGTTTAGGTCAATATACAATAGAGGGGTAAATTGTG TCTCATCACTATTCTTATTCCATCAAATAGAGGGTTAAAATATTATTGAA TCAAGTTTTTGGAACTTTTCCTGAGTTTTCCCATCTTCTATTTTTCTAGG GATCCATTATTTTTGTAAAAAACCCTGAAGTATTTTTATTTATTTTCTTC GTACTGTTCACTGTTCTAATCGCATGGATTATTTGTGCTGCTGCATTTGA CAACATACAAGGTGGTTACGTCATAAACGTCAAACCGAGATACATCATTT TTCTCATTATCGGTATCTTTTGCTGGATATGGGTCATTTTTGTCATTTTG TTTAATATTTTGGGATGTTTCAATAAATGCATTTTCAATCGACTCACAAG ATTGTTTGGTTGGGTAAGAATTTTGAGCACGTTGTTTTTGCCCCTTGGCT TTTTATGAAATTACAGAGAAAAGTACTTCCCAAGAATACTACGCTACTTA ACAGTACGTCTTTTGNTGTGGTTTTTTATGAAATTACAGAGAAAAGAACT TCCCAAGAATACTACGCTACTTAACAGTACGTCTTTTGAACTACTAAAGT TGGTCTAAAAAATAATCTGCGATGGAAACAAAAGCTGTAACTTTAAATGA AATTCGAACTAAAAAAAGGTTTTTGTGCTTGTTGAAAAGATATTCACAAG AGAAATGTTATCAAATACCATTAAAATTTCCAAATTTTGAAAAGATTCCG CTTTAAAAAGGACTACAGCAACCTCGTACTTCTGGGACCTTATAATTCGT ATTTCGTAAATATGCAACAAATATAATCATCCACTGATCTTTATAGTGGT GTAATGCATCGAAAGCGCTAGATCTACTTTTGCTTAGATATAAGTGATGT AGCGTAGTCTGTCGTTAGGAAAAGTTGTAACACTACAATGTCTTCTAGTT ACGGGTACCACTTTCAAAGAAACGCCGATCAACATAAGATGGCAGATATA GCTTGGGCCGGGGTTTACAGAAGTCAGTGATATCATCAAGGGCGTACCAA GACTACTGACAACGAAGTGATTTGATGTGCATGCATTTTTTTTCAGCACA TCTTTTTATTGGCGTATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGA TCCATCTTGTTAGCTTGGCATCACAAATTCTGGAGTGGAAATATCGCAGC ATCCGTAAGTTCTCTTTTGAAACAAAATATATTTATGAATCCTCTCATAG TTTCTTGGATGGTTCAAGCCCCCTATATAATCAACCCCCCCNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNAGACTTTTTCAACCCCCCCCCCCTTACAGGGTTGTCTGA GAATTTGAAGACCCCCCACCGCTAAACATAGGGGAAATGAAACTATGCCT CTATGAGCTACGAGTCCAATTATTATATGCCGTTTTAGACTTTTGACTTT GAATTGGATTGCTAATTTTGTGCTCGTTGGAAAGGAAAAATTACGAGAAG GATATTATCATGTGAAAATCAAACGAGAAAAAAAATTAAATGAAACTATT GATCAAAATTGAAAGTTGTTTGCATTTGTAATTTCACTGACAGTTAATTC GAAAAAAAGTACCTTTGTCTGTATTAATTAACGTCGTGCAAGAGAAATCT TTGTAGGACACTATAGATGGTAGATATAACAGTCTCTAAGGTCTACCATT TGGTTCTCTTTTTTTTGCATCATATAACGAACAACGAGTGGTTTTTTGTA CCACAGGATATTAAACGACACTAAAGCTTGTCCAAATACATCCAAGAACA TTTCAACAACAAATTAAAATAAGAATGAGCCATCAGCAATGTTATTTCAT GCAAAGAAAAGGCTTTACATCAACAAAACACAAAGTCTCAGAACTTGCTG ACTCTGGCTGCCTTTTTGTTTATACTCTCTCCGAGAGTTCTGTTTCTAAG AATCGCTTAAGTGTCTAAAGTACGCTTTGTATCTACAATTATAGTTATAT TTAACAATTGTAATGTCTTAAGCGCTGTATTTGTTAGTTACATTCTGATA GCGTAAGTATCTTATCCATTTATTCTTTTTGTCTTACAGATTTTTGGATT CGTCAACTCCATTTTATTTTTCATCGATTCAATCATGTATTATCGAAGAT GTCGAAAATATCGAGTTCAAATTCGAAAAATCCGTCGAGGTTTGATTGAG AATGAGGAAGAGGAAATTTGAAAAATCTAAAGATGTATTGATTGCATTTG TTTCAATATTTACGGAGCTGGTACAAATGGCAATAGCTTTTCCTGTAATG GAGACAGTTAGTTTATGATTTATCTAGATCCTGACTGATTGTAGATGACA ATAGATCTTATCGGAGTTTTTGATTTCTTCTAAAAAAGCGATGCATCGTG GGATTGTTTCGGGAGTATTGCAATAGAACTCCCTCGAGGAATTCCTAAGA GCTTTCTATTGTAATACCATCGAAACAATCCCACAATGCATCGCTTTTTT AGAAAAATGAAAAACTCCGATAAGATCTATTAATCAGCACTCTTACCGTT TTTCAGTTAAAACTTCGAGCTGTTCAACACCGCAAACCTCAAAAGGGTAG ATACATAACATAAACTCGCTTACCCGTGCAACTGAGAAAGAGTTTAATTA TCAACTTGTCCTTCCTTTATTAGCCCTGAATTACGCCTTTCCCGAGTCTA TTATTATAGGGAATATTCCAAACATTAAAGGATGGGATCGTCCCTGATCT ATTGACGGTAGGTGCAATATGGACAGAAAATAGACTTTAATTTACGGTGC ATTTTCATAATATTTATCAGAAATTTGTCAGATTTTGCAACAAAAGAATT CTCACTTATACTACGCCTTTACAGTGCACTTTCTTTCTAACGATCGTTAA ATTGCACTTTGAGGAGCCTAAAAATGTACCCATAAAGCATTCCCTACTTT TGAGTGCTCATCCGGGTCAATTACTCTGGAGTTATTACATCGATTGTTAT TAATTTTAGTATTTTTATCACTTTTTGTAGGAAATAATATTTAAATTATA TGTATACTGTATGTTGTAGTTTTTTGTATACTTTTTTGCACAATTTTAAT ACCTTTTTGTTTTTACGTAATTTTTGTTACCACCGTGTATGATATTTAGA GTTTTCATGCTTAGATATTTAGTATAATATTTAACTTTTTCTGTAGATAT AATATAACAAATTACCAAATATGAAAAATTCAAATTTCTC

Coding sequence (CDS) from alignment at scaffold_89:217612..226351-

>TCONS_00073271 ID=TCONS_00073271|Name=TCONS_00073271|organism=Clytia hemisphaerica|type=CDS|length=2424bp|location=Sequence derived from alignment at scaffold_89:217612..226351- (Clytia hemisphaerica)
ATTTTTGGATTCGTCAACTCCATTTTATTTTTCATCGATTCAATCATGTA
TTATCGAAGATGTCGAAAATATCGAGTTCAAATTCGAAAAATCCGTCGAG
GTTTGATTGAGAATGAGGAAGAGGAAATTTGACACATCTTTTTATTGGCG
TATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGATCCATCTTGTTAGC
TTGGCATCACAAATTCTGGAGTGGAAATATCGCAGCATCCGGATCCATTA
TTTTTGTAAAAAACCCTGAAGTATTTTTATTTATTTTCTTCGTACTGTTC
ACTGTTCTAATCGCATGGATTATTTGTGCTGCTGCATTTGACAACATACA
AGGTGGTTACGTCATAAACGTCAAACCGAGATACATCATTTTTCTCATTA
TCGGTATCTTTTGCTGGATATGGGTCATTTTTGTCATTTTGTTTAATATT
TTGGGATGTTTCAATAAATGCATTTTCAATCGACTCACAAGATTGTTTGG
TTGGATGTCGAATGGTCAGGAGGAAAGGGATGGAAATGATAATTCATGTA
CACCAAACATAAGATTTATTTGTTCTTTTGAAGGCGTACTAAAGATCATA
GAATTTATTTTTGGATTCGTCAACTCCATTTTATTTTTCATCGATTCAAT
CATGTATTATCGAAGATGTCGAAAATATCGAGTTCAAATTCGAAAAATCC
GTCGAGGTTTGATTGAGAATGAGGAAGAGGAAATTTGACACATCTTTTTA
TTGGCGTATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGATCCATCTT
GTTAGCTTGGCATCACAAATTCTGGAGTGGAAATATCGCAGCATCCGGAT
CCATTATTTTTGTAAAAAACCCTGAAGTATTTTTATTTATTTTCTTCGTA
CTGTTCACTGTTCTAATCGCATGGATTATTTGTGCTGCTGCATTTGACAA
CATACAAGGTGGTTACGTCATAAACGTCAAACCGAGATACATCATTTTTC
TCATTATCGGTATCTTTTGCTGGATATGGGTCATTTTTGTCATTTTGTTT
AATATTTTGGGATGTTTCAATAAATGCATTTTCAATCGACTCACAAGATT
GTTTGGTTGGATGTCGAATGGTCAGGAGGAAAGGGATGGAAATGATAATT
CATGTACACCAAACATAAGATTTATTTGTTCTTTTGAAGGCGTACTAAAG
ATCATAGAATTTATTTTTGGATTCGTCAACTCCATTTTATTTTTCATCGA
TTCAATCATGTATTATCGAAGATGTCGAAAATATCGAGTTCAAATTCGAA
AAATCCGTCGAGGTTTGATTGAGAATGAGGAAGAGGAAATTTGACACATC
TTTTTATTGGCGTATTCACTTAGTTGGTTGTTCTTTTGGATGTTTGGATC
CATCTTGTTAGCTTGGCATCACAAATTCTGGAGTGGAAATATCGCAGCAT
CCGGATCCATTATTTTTGTAAAAAACCCTGAAGTATTTTTATTTATTTTC
TTCGTACTGTTCACTGTTCTAATCGCATGGATTATTTGTGCTGCTGCATT
TGACAACATACAAGGTGGTTACGTCATAAACGTCAAACCGAGATACATCA
TTTTTCTCATTATCGGTATCTTTTGCTGGATATGGGTCATTTTTGTCATT
TTGTTTAATATTTTGGGATGTTTCAATAAATGCATTTTCAATCGACTCAC
AAGATTGTTTGGTTGGATGTCGAATGGTCAGGAGGAAAGGGATGGAAATG
ATAATTCATGTACACCAAACATAAGATTTATTTGTTCTTTTGAAGGCGTA
CTAAAGATCATAGAATTTATTTTTGGATTCGTCAACTCCATTTTATTTTT
CATCGATTCAATCATGTATTATCGAAGATGTCGAAAATATCGAGTTCAAA
TTCGAAAAATCCGTCGAGGTTTGATTGAGAATGAGGAAGAGGAAATTTGA
CACATCTTTTTATTGGCGTATTCACTTAGTTGGTTGTTCTTTTGGATGTT
TGGATCCATCTTGTTAGCTTGGCATCACAAATTCTGGAGTGGAAATATCG
CAGCATCCGGATCCATTATTTTTGTAAAAAACCCTGAAGTATTTTTATTT
ATTTTCTTCGTACTGTTCACTGTTCTAATCGCATGGATTATTTGTGCTGC
TGCATTTGACAACATACAAGGTGGTTACGTCATAAACGTCAAACCGAGAT
ACATCATTTTTCTCATTATCGGTATCTTTTGCTGGATATGGGTCATTTTT
GTCATTTTGTTTAATATTTTGGGATGTTTCAATAAATGCATTTTCAATCG
ACTCACAAGATTGTTTGGTTGGATGTCGAATGGTCAGGAGGAAAGGGATG
GAAATGATAATTCATGTACACCAAACATAAGATTTATTTGTTCTTTTGAA
GGCGTACTAAAGATCATAGAATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045455XLOC_045455Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073271-exon-scaffold_89-1575043694:226140..226351TCONS_00073271-exon-scaffold_89-1575043694:226140..226351Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1575043694:221428..221532TCONS_00073271-exon-scaffold_89-1575043694:221428..221532Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1575043694:220839..221102TCONS_00073271-exon-scaffold_89-1575043694:220839..221102Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1575043694:220048..220155TCONS_00073271-exon-scaffold_89-1575043694:220048..220155Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1575043694:217612..218762TCONS_00073271-exon-scaffold_89-1575043694:217612..218762Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1510915933:226140..226351TCONS_00073271-exon-scaffold_89-1510915933:226140..226351Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1510915933:221428..221532TCONS_00073271-exon-scaffold_89-1510915933:221428..221532Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1510915933:220839..221102TCONS_00073271-exon-scaffold_89-1510915933:220839..221102Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1510915933:220048..220155TCONS_00073271-exon-scaffold_89-1510915933:220048..220155Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1510915933:217612..218762TCONS_00073271-exon-scaffold_89-1510915933:217612..218762Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1491911889:226140..226351TCONS_00073271-exon-scaffold_89-1491911889:226140..226351Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1491911889:221428..221532TCONS_00073271-exon-scaffold_89-1491911889:221428..221532Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1491911889:220839..221102TCONS_00073271-exon-scaffold_89-1491911889:220839..221102Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1491911889:220048..220155TCONS_00073271-exon-scaffold_89-1491911889:220048..220155Clytia hemisphaericaexon
TCONS_00073271-exon-scaffold_89-1491911889:217612..218762TCONS_00073271-exon-scaffold_89-1491911889:217612..218762Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073271-proteinTCONS_00073271-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_89supercontigscaffold_89:217612..226351 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.67198 3.63392 1.04701 0.772708 37.5766 24.7072 20.2621 21.1099 16.1002 14.7188 12.9919 10.0545 8.29274 6.00851 3.31893 3.79633 11.3648 13.4796 10.2509 12.7452 14.3043 13.0939 8.97653 9.8148 4.5379 7.1401 16.3655 11.7146 9.55079 9.28965
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008253Marvel
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073271 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top