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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072955 ID=TCONS_00072955|Name=TCONS_00072955|organism=Clytia hemisphaerica|type=transcript|length=540bp
ATGCGTTAGTCCGAATGTCAAGGAAACAACTGTCATCACTTCACTGGCAA
CTTCTCTTAATCAATTTTCGTGGGAATTATCAGCATTCCGTTACTTCGGT
GATTCAAATACTGTTGTGATCGTGTGTGAAGTTTTAGTTTGTAAAAACGA
TGCATTTTGGAGGTTGAGTGAAGAATGCAAAAGATGTGGGCAAACTTCCA
ATAGAAGAAAACGGAGGCTAAATGATGAAGAGGAAAACCAGGCTGTTGTT
CTACAGAAAAGAACAGTTTCTTCAGAACCAATCTATATCATTGAGAAGCC
ACAGAGACAAGaACAAAAagcacgtcaaaaagacaatggAGCGATACTGA
AACCAACTGGCATAGCAATCATTGCAATTTTGGCAACTATCGTCCTCGTT
ATGGGTGCAGTTCTTATCAAGAAACGATTGTAAATTGATGtgaatcaaat
tcaaaaaagttcacttttacttttacactatatttttatataaaatcaaa
atgttatttttagggaatttattttgaaacagAGGAGAAG Run BLAST on NCBI transcript from alignment at scaffold_86:1253913..1254905+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072955 ID=TCONS_00072955|Name=TCONS_00072955|organism=Clytia hemisphaerica|type=transcript|length=993bp|location=Sequence derived from alignment at scaffold_86:1253913..1254905+ (Clytia hemisphaerica)
ATGCGTTAGTCCGAATGTCAAGGAAACAACTGTCATCACTTCACTGGCAA
CTTCTCTTAATCAATTTTCGTGGGAATTATCAGCATTCCGTTACTTCGGT
GATTCAAATACTGTTGTGATCGTGTGTGAAGTTTTAGTTTGTAAAAACGA
TGCATTTTGGAGGTTGAGTGAAGAATGCAAAAGATGTGGGCAAACTTCCA
ATAGAAGAAAACGGAGGCTAAATGATGAAGAGGAAAACCAGGCTGTTGTT
CTACAGAAAAGAACAGTTTCTTCAGAACCAATCTATATCATTGAGAAGCC
ACAGAGACAAGGTACAGTAAAggaaaatttccatttttccaattAGTGCT
ACAAAATTGTGTATTGTAAAACTGCTATGGttattctttcaaattttttc
tataTAAGCCACTAAAAGATTTCCATTTAAGACTCCGAACTGAATTTTCT
CTGAAACGCCATAGATCTGTTCAATTAGTGTGCAAagtcgaaattcacgc
aaactgGGTCCgtagtatattttttttcaatttgataaGAACCATCATTC
TAGCTAAGTTCCAGGATTGTTTACTGATGACACTGACTGTCACTTTAAta
gaggaagaaattttggcggaaagaaaattcgGTGGGTTTGGCGGAAGTCC
GCAAAATTCAATTCCTGCTTAAATTAATTTTTGCCTTCAAATTTTCCGGC
AATCCGTCAAATTagattcaaattaaattttttttggatcacacaccaaa
ttaaatttttctagaACAAAAagcacgtcaaaaagacaatggAGCGATAC
TGAAACCAACTGGCATAGCAATCATTGCAATTTTGGCAACTATCGTCCTC
GTTATGGGTGCAGTTCTTATCAAGAAACGATTGTAAATTGATGtgaatca
aattcaaaaaagttcacttttacttttacactatatttttatataaaatc
aaaatgttatttttagggaatttattttgaaacagAGGAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072955-exon-scaffold_86-1491911889:1253913..1254223 | TCONS_00072955-exon-scaffold_86-1491911889:1253913..1254223 | Clytia hemisphaerica | exon |
| TCONS_00072955-exon-scaffold_86-1510915933:1253913..1254223 | TCONS_00072955-exon-scaffold_86-1510915933:1253913..1254223 | Clytia hemisphaerica | exon |
| TCONS_00072955-exon-scaffold_86-1575043694:1253913..1254223 | TCONS_00072955-exon-scaffold_86-1575043694:1253913..1254223 | Clytia hemisphaerica | exon |
| TCONS_00072955-exon-scaffold_86-1491911889:1254677..1254905 | TCONS_00072955-exon-scaffold_86-1491911889:1254677..1254905 | Clytia hemisphaerica | exon |
| TCONS_00072955-exon-scaffold_86-1510915933:1254677..1254905 | TCONS_00072955-exon-scaffold_86-1510915933:1254677..1254905 | Clytia hemisphaerica | exon |
| TCONS_00072955-exon-scaffold_86-1575043694:1254677..1254905 | TCONS_00072955-exon-scaffold_86-1575043694:1254677..1254905 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_86 | supercontig | scaffold_86:1253913..1254905 + |
Blast
The following BLAST results are available for this feature:
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