TCONS_00072945 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072945
Unique NameTCONS_00072945
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3494

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072945 ID=TCONS_00072945|Name=TCONS_00072945|organism=Clytia hemisphaerica|type=transcript|length=3494bp
ttgagcAGTGGGAGGTCAAAATGAAAACTTTATTTACATTTACCACCCTC
ACATTGGCGTTTGTATGTAGGTGGACATGGGTGGCAGATGATATCGAATA
CCCTGACTTGACGAAATGTCCGATTCAAGTGCAACCTATGGGATGTTACA
GAGATAAGGATACTCCCAATCGTGCTCTTCCTGATCAAATCGCTAACAGT
CGGGATCCTGGATCGACAGTTTTCATGGAACCGAATTTGAATAACCATTG
GGGAAATTTTGCTGCCTTCTTGGCAAATTTCATTTGTCAGTGTGCCAAGA
AAGCGGCCAAAGAAAAACGTGGGCAATATATTGGTATTCAATACTACGCT
GAATGTTGGAGTGGAGAAAAAGACACAAGCGATCCTCAATCAGAAGCCTA
TAAGAAGTACGGTGAAGCTAACGCGCAATGCATTGATAATAATTATGAAA
AGTATGATGGATCTAAATCACCATGTGGTCTTNGCATTGATAATAATTAT
GAAAAGTATGATGGATCGAAATCACCATGTGGTCTTTATGCTGGTACACA
ACTCACCAATTACGTCTACAAAATCACTGAATTGGACCAAGaCGTTCTTT
GCCCATTACATTTCAAACCAATGGGATGTTACAACGATAACCAAGTTAAA
CCCAGACCTCTGCCAGATTACATTATGAACGAGCGTGACTACACTCTACC
CAATTGGAATGGTCACATTATTGATTGGAACGGATGGGACAAATACATGC
CAGCGCTGATATGTCGTTGTGCGATGGCTGCTAAGAAAGGGAATTATAAA
TATTTTGGTATTCAATTTTATGGTGAATGTTGGGCTGGCAACGATGAAAA
GGAATTAAAAAAGGATGGAGATGCGGATAAAGACAAATGCTTGGTTAAAC
TTGGAGCTCCACCATACGGTCAATACTGTCCATCAAAGAGTGAACAAGAA
GGGATGTGCCATCCACAATTGTGTGTTGGTGTTCAGAAGACAAACTATGT
CTATGAAATGTTACAAGGCCCTGGACCTTGTTCCAAAAATCCATGCAAAC
CAAACGAGAAATGCATTCCCAACCCaagtttgaaagaaaaattcaaatgt
gAAGAGTCcccttttgaagaaaaagaccCCGAAAAGAAGCCGGAGGACGA
CCCTACAAAACCTCCATCGAATAACGAGCCCTCAAACGAAAAGCCCGTGT
CTATTGAACCGAAAGACGAAAAACCCACATCCACTGAACCGAAAAACGAA
AAACCTGCACCTACTGAGCCCTCGAATGAAAAGCCCGCTTCCACTGAACC
AAAAGACGAAAAACCCACATCCACTGAACCGAAAGACGAAAAACCCGCAT
CCACTGAACCGAAAGACGAAAAACCCGCATCCACTGAACCGAAAGACGAA
AAACCCACATCCACTGAACCGAAAGACGAAAAACCCGCACCCACTGAACC
GAAAGACGAAAAACCTGCATCTACTGAGCCCTCGAACGAAAAACCCGCTT
CCGCTGGGCCGAAAGACGAAAAACCCGCATCCACTGAACCGAAAGACGAG
AATCCTGCATCCACGGAACCGAAAGACGAAAAATCTGAATCCACTGAGCC
GAAAGACGAAAAACCCGCATCCACTGAACCGAAAGACGAGAATCCTGCAT
CCACGGAACCGAAAGACGAAAAATCTGAATCCACTGAGCCGAAAGACGAA
AAACCCGCATCTACTGAGCCTTCGAACGAAAAACCTGCATCTACTGAACC
GACAAACGAAATACCTGCATCTACTGAAACGAAAGACGAAAAACCAACAT
CTACTGAACCGAAAAACGAAAACCCTGCATCTATTGAACCGAACAATCAA
GACCTAAATAAATATAATCCGCAACCAACGCAGGGAAACAGAATGCCACT
TTGCTGTAATACAAACACTTGTAATAGAGTAACAAAATCGTTATGGTGTC
ATAAAGGCAAAATGTAAGCATAACTCAGAAAGATTACACAGTTGTCATGA
TCCTGAGTGAGAAAATATGGCAAGAACTTTTATTgcaaaatcatttttat
ttttaggcagttAAGTAGTATTTGCAAAACATTTAACTTGTACATAAATA
CACAATCACATTCGAAAAGCTTTCGAATTTTAGTATCATCTAAATATCGA
ggattgaaaaaagtttgtttcacTTGAATTATTTCCATtgttcttcttta
aaaaaaaattaattttgcaatattataaaatttcaaatttataaatattC
TCTGTTATGACGTTTATAAGTTCGCATTTGTATGCAAATATTACTCCATT
TTAAAGGACTTCCTAAGTAAAGCCTTCGGAAATGttggaatttgaatttt
taattttgatgaatgtCTACATACAATGTATGTCTTATATACATTATAAG
GAGAATGGGTTCAAGTTGATCCAGGTTTTTTTACAACTTCAGGTTACTTA
AGAAGCTAATAGCAATACGGTTTAGCGGAAGACTACAGAGTTGAATCTCC
tttgtaggatttgaagccacttatttcctacaTAAGTTGCACGGCCCGCa
tggttttcatacaaacgctGAATCAAAAGTATTACATTCACCgcaacaat
ttgaaaaataaaaaacgccAACGCAAAGGAAatgctacaatcagtgccat
aacatattggcaattttggctattttaccattttacaaaaattgaagttc
gagcgagattgtcaatttcgggccttcaacttgatttcatcgaatatttc
gatctgggagggatttattggtttctaggctatatttcaagccctaccgg
accatttttgaacttttggatcctcagatcctaaggtctggCGTTAAAAC
tcaagagttaaaactctacctttccaacctaatttggagcacttacaaat
cgtttgtggttataaaatttcgtggggaatttcccttttgtgccaagtat
tttggaacTGATTGTAGATTCAATCTGTATTCCGAAACGCAGCGCAGACC
TTAAGgctttcactttttcttgtttaaaaaaaaggttgaagattcgcctc
tagccttcggcttgaaacacATGAttaataatacaccttttcgactgtag
ccgccgccaattgccgcgcaggGTTTTTTTTGCCCGTACCAGCCTTTTTT
TTGCCCCTATAGACAATAgtaaaatgtgtcaaaaaaggattcgGTCGATT
AAGGGGGATAAtcaaataattaagtggcacgcgactacggtcgaaacgAT
GTATTGTCAACTATTGCCTGCTGCTATTATGGATCATAATGTTCTGTTTA
accaaaaatataaacaaattgaCATCATACAACCTCCTTCTTTCATAACG
TTAACTAACaccactttcatttttcaagttCTTCAAAAATCTACCAACAA
ACTTCTTCTTTTTTACTTTCGACGGTTATTTCCAGCCATAATCATAGCAA
TTcgaatgaaaatgttgatagtATCCATATAAATACCGATCGAT
Run BLAST on NCBI

transcript from alignment at scaffold_86:1133088..1149639+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072945 ID=TCONS_00072945|Name=TCONS_00072945|organism=Clytia hemisphaerica|type=transcript|length=16552bp|location=Sequence derived from alignment at scaffold_86:1133088..1149639+ (Clytia hemisphaerica)
ttgagcAGTGGGAGGTCAAAATGAAAACTTTGTAAGGTTTTCTTTCgtgt
ttctttttcaatttcttagAATTTCTATTTGTGTTTTTATATACACTGTA
GTCAGAatagaacacccccttctcacagacctggtaggattttgTTTTTG
CCAGGCGGAgcaaaaataacggactgaaactcgattgaaattgttttttt
atgagtTGGGATTTCATTTTCGTTGTTCTCAAGTCAGACAATTCAGtagg
gatggaaaaaaaatgcaatattttacaatgagaatttgtttatttgatta
ttttcaatggggacaaaaatcggagtataattttctaccgggacgatatt
ttgaccaactGCTCCATTTCGTAGTAaggggttccagtgggtctgaAAAG
GCGTGTGTAATAGAGGTTAAATTAAGGCCACGAGATAGCGCAAGTTTAAA
TGCTTCTCTGATATTTTAGATTTACATTTACCACCCTCACATTGGCGTTT
GTATGTAGGTGGACATGGGTGGCAGATGATATCGAATACCCTGACTTGAG
TAAGTTTTGTGAGTTTTTGAAAGAAGAAGAATGTTAAGCAAAAAGTAAAA
ACCGACGAGTTGATTTGATGCAATGGTATACGTttattttattagaacat
ccaagccttcggatgttcttaacttttttaggttTAAGCCTAAAGATATT
CTTACGGTGTtcttttaccattttgtgagctgctttttttggaatttctt
aagaaatcgggtgttctAGAATTTGccgagccttaaaatgtttttaattt
agaTATGTTATCCTCCTTTTCTGAGGAGCCTCCTCAGGAAAATTCTCAAG
GTGACTTTATGAATGATAActgcatgaacatataaaccaCTGGACCTTTG
TCTTCTATTGTGTCTTTCGATTTTGTGGTCCATTTTAGGGGTCCATTTTG
TTGTCAACTTTTATTATCTCNtgctctattataaaaaagaattttcattt
tgtaaacaatcctcctatattgttggaatattgcaaatctagctgacaat
atattgcggacacctctTCAATATATTGCGAGCATTAAGCAATATATTAT
CAATATAAgattttaacttgttcttaacattttggccatcgaagccctta
tatatagtttgttcttacaaaaaatctGTTATTTTAAGATGTTTTGAATA
AGTTAGcagtaatatattttttatttcttagatTTCAGAGAACATTTGAA
ATTCCCTGATAAGATATTGGTTTATGGGGCGTTGCCCTTTGTATTGCCGC
AAAAGAAGCTCCTTGGATTTTCTCCTAAACATGCGACTGGCCCCTAGATA
TGTTATCCTCCTTTTCTGAGGAGCCTCCTCAGGAAAATTCTCAAGGTGAC
TTTATGAATGATAActgcatgaacatataaaccaCTGGACCTTTGTCTTC
TATTGTGTCTTTCGATTTTGTGGTCCATTTTAGGGGTCCATTTTGTTGTC
AACTTTTATTATCTCCCCTGTAAGTCGAGTTAGTCAATGTTCAAAGTGTT
TAAGCGCTTACAAAACAACATTCTTTGTTGTTATTGTCATCAGGAAAAGA
GACTATGGCATTAATATGGTGTGAGGGGCTTATCTAATCAATGGTTTCGA
TCTTATCTTACAGACCGACAACAAAACGTCTCTGTTTCTGGCGTGGACAC
TTTTAAACGCCCTGTTAATCACGGAGTTCCTCAAGGATCTGTCCTTGGAC
CTATTCTCTTTCTGATCTTCATTATGTTCTTCAAAATAGTCAAACGAATc
tttttgctgatgataccTGTCTCCTCTCCTCTGACTCTGACCTTCAGTCT
CTAGAAACCAAAGTCAATTCTGATCTTACACGACTCTCCTCTTGGCTCCG
AGCAAATAAAATCTCACTCAATGTATTGAAAACAGAAGTGTTGCTTACCC
GTTCCCTATTCAATGAAGTTAAAGCTCGATGACTTCGAACTTAAACTCTT
GACTTGCGTAAAATACCTTGGGCTATTTCTCGATGAATTTCTAACCTGGA
ACTCTCATTTTGACCATCTAGCAAAAAGACTTGGCAGGGCAAATGGCATA
CTTGCTAAGCTTCGTTATTTTGTTCCTGTTTCTGTCATAAAAACTCTTTA
CTATGCTCTTTTCCATTCACATATGTAATATGCAAACATCGTCTGGGGTC
AACGATTGACTCAACCAACCTAATTATATTGTAATATTCACATAGTCTGg
cagaaataaaagttgaccTTGAAAAAGATTCCGCGTAAACTTTCTTTGTA
CCGTTGGAAGTGGAATTTTATGAGGTaaacatactcagagcctcacgtCG
AGGCCCTTTGGGGGGGGATATTGGTGAAATAAAACATTAAGGACTCATCT
TCGCTATAAAATGCCTACAAAAGTGCTATCCTTGCAATGGTAGGTGTCTT
TTAAAACACTCAAtctatacccctgtctcaaaaatctAGGGGGGGGGTAC
CCAATAAACATTTCTGAAAACCACAATCAATTAAACAGTGTCATCCATCA
TATGAAATGGGTCAAGTGCAAGGCAAAAGCACATGGTGAGAGCGCTGCCT
TTCAGAGATTTTGAATAGCTTTGATAGGTTTTTATTGTAGCTGATAACCA
GTACAGTGCTCAAAAACGTATCTTTTTTGGGGCAAAGAAGTACATTCAGG
CTTGATTTTACCAAAAGCTTTCCCCAAGGGCCTCATcatgaggctctgag
tatgatAGTCTACATAAAATTCCGCATCCAACGGTACAAAGAAAGTTTAC
GCAGATTTTTTCTCTACGTTCACCCCTGTTTTATTGTATTTCAGCCAGAC
TAATTCTTTTATCTTTCAAATCCAAACTTTTAGTAACACTATCTCTCTAA
CAAAATTTTACCTGGAGAttaattttgtgttttgatttacggtaaacaaa
caaaaaattatatatccGCGTTGTCTGAAGAACCTTGAGAGGGAACAAAG
ATGTGAAAAATATTATAGTAGAAACTTTATCATATTTTCTCCCAAAACAA
ATAAGAAATTACAAAGAGTGGTGTCCATAAATGGCATAAATCCTCTCCAG
ACGAAAAAGGGCGTGTACAACTTACAAATTATGAATTACAAGTGAATAAG
AAAGCAACAAAAATTACGTTCAATATAATTAACTCTCTATAAATGAtcct
ttttataatatattttttagaaaatagaCAATTCCAAACTTCAAACAGTT
ATATTTCTGGCTCTTGAAGTCCTAGAAGGCTTGTTTGATTTCAAAGAACC
TTTTTTGTTAAAACTCCTTCGGCACTGCAGATCTTCATTTTGTCAATAGA
CATTTTCGGCTATGCGTGCATACATGCCCTTATCACGATCCTTACGCGCC
CTTctcagaaattgaaaatttgacccaATGGAAGTTCAATGAAAGTTTAC
CTTTCAGAGGCTCCTGTGACCTGCATTTGGtttcaaaaactaataaattg
gGTACAAGTGAACGTAGAATTTCATAGAGATTTCGAAAAAACACTAACAA
AATCTAGTCGGTAACGAACGTGTCAAAGGATCAGTTACCATAAACATATG
GAACAAAATCAGTAAAAGTTTCTATATACGTCGCACTTTCATTTCGACGA
AGGTCGGTTGAATTTTTTAACTNTTTTCGGCTATGCATGCATACATGCCC
TTATCACGATCCTTACGCGCCCTTctcagaaattgaaaatttgacccaAT
GGAAGTTCAATGAAAGTTTACCTTTCAGAGGCTCCTGTGACCTGCATTTG
GtttcaaaaactaataaattggGTACAAGTGAACGTAGAATTTCATAGAG
ATTTCGAAAAAACACTAACAAAATCTAGTCGGTAACGAACGTGTCAAAGG
ATCAGTTACCATAAACATATGGAACAAAATCAGTAAAAGTTTCTATATAC
GTCGCACTTTCATTTCGACGAAGGTcggttgaatttttttaactgtCAAC
CCACATGATATCTCCCCCTTTTTTAGTGAACTTGTCCCGACCTGTTAACA
GCGTTGTGTCTAGCAACTGTAAAACCACCAGCCTACTTTGTTATAAGAAT
GTGAGCATTGTTCACCACTCTTATCGTTGTCAGAATCATAAGTTTAAAAT
TTCATACCATTGTGATATGTTTTAAAGGCGTATCATGGCTTGTCACATTT
CCTGTCGCACCAGTCAGGGTCAATTGATATTTGCACAAACATTTCTGAAA
ACCACAATCAATTAAACAGTGTCATTCATGATATGAAATGGGTGAAGTGC
AAGGCGAAAGCCCACGGCGATAGTGCTgcctttcaaagactttgaatagc
TTTGATAGGTTTTTATTGTAGCTGATAACCAGGACAGTGCTCAAAAACGT
ATCTTTTTTGGGGCAAAGAAGTACACTTCAGGcttgattttaccaaaagt
tttctCCAAGGGCCTCATCATGAGGCACTGAGTAtgataatctacataaa
attccgcttccaacggtaccaagaaagtttacgcggAATTTTTTTCTACG
TTCACCCCTGTTTTATTGTATTTCAGCCAGAATAACatattgtaaatttt
agtttaaattttgcaggcaaataaatcatttttgaatattgaattgaatt
gaattgaattcttTGGTTGCATGAGGTACGGTGGGCCCAGACTACCTAAT
TATATCTGTTTTGTACATGACCCTAAGAAACCACCGTACCTCATGCAACC
aaagtataagaaagccgcggctggaatatgtaccgcattgtcttttcagt
taatctccgagctttataagaacatcaagatgctcagtttattattattt
tccttcacaaaaagtttttttgttgctagatatctttgagtctgtaccca
atagaacacttgaactaattttggacatattttaggggtattttgtagaa
acaatagtttttcgccaaaattgaaattataagaactataNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNattcaagatgacaactttcctgtcagtttaaatgataaatt
ttgaaggtgctggcttgaaattttcacagtattatcttgatgtacttttt
cattgattcctaaaaagatttcactgaattattgtgaaggcatttcgagg
cacctcattagcttttgagttctttcagcccagctattttgtgcttgttt
gaatttcttagtgttgatttttcctttacaatgattttataatgcaagtg
tattatcaagggcatactattaatgtctaaaacgcactgacaagtaagta
ttaacgacaaagcAATAAAGTTTAcaattaaagatgctacattactgatt
tcttgatcaacaaagtcatcaaatacgacagagatagaacaacagaaaat
caaatggtatcattccagccgcggctttcttatactatgatgcAACCAAA
GAATGTTGTTTTGTAAGCGCTTAAACACTTTGAACATTGGCAACAATGAA
ACTCAAGCTCTGTATTACTCGGATTTTTCGAGAAACGATTAtactgtaca
gggtgtccctaattaaagtaccgagtttgaacatgcgattgagtagaaaa
gtttgtgtgtgttatcgctaaaatataagaacgttctccatcacacaggc
ttattacaaaaggtagttacaacgtataaattaatcgtaatgacaaagaa
aaaagagggagaatttaaaatacaattttgtgaacacgcacataaaactt
tctactcaatcgcatgttcaaactcgatactttaattagggacaccctgt
aaacACTCTATTAAATTGTAttaggatttttattttcaaaaagtttccta
CCAATCTTTGGGGGGAAAGTCAGTTTGGACAAAATGCTATAAAGGTATta
tataattttgaaataacttttCCTGAAGACCCtgcaatgttattttttgt
aaGAGCAACGGAACtccagtttaaaaaaaaattattttcaactgaggatt
gtttgtaaaaacatgaaactgccagtattgaaaaaataattttcattact
ttaacTACGAAATAACTTTTCCTGTATTTTTCGTGATGTTATATTTTATC
TGGAAAGTGCGACTTTTAAAACCATTGTGTTTTGTACATTGGTGTTTCAA
ACAGTTTTCTCAAATAATACACAAACATGCTTTTTGTGCATGGGTTGAtc
ccaaacaataaaaaatagttCAAAACATTTTGAGATTTGAGCGGTcgaat
ttatgaaaataattatttgagcAGTGGGAGGTCAAAATGAAAACTTTGTA
AGTTTTTCTTTCgtgtttctttttcaatttcttagAATTTCTATTTGTGT
TTTTATGTACAatgtagacgatgctatcgtccgtataatatgttattatg
atataacatagtttgtatattatataaaacgtaatatgtttcgcggcgga
tagagtctgtgtttacagctactcccgtaaaaaattcccgtctcacgttt
gttcctcttagataaaactcgtcttagactatagcatagtctatgtACAA
TGTAGTCAGAATagaacaccccttctcacagacctggtaggattttgTTT
TTGCCAGGCGGAGCAAAAATgaaagcatccaacgaggacctttttttaaa
tatctgtttcccagacatagcgttcctggaaaatttgatctgttggccga
atatttcaaaaatcttattcctagaaatgaagatttgtttctccgcaaaa
cctaaatttttaatctcaaagtatctttcctagaaaatttgatctgtttc
cacaattttcagaattaaaaatctaatctgttttcccaaataggatatct
gttcccctctcctggaaattttcatctgtttccctttctttttgttattg
atatctgtttcccccataaagttcaatctgtttctccaggggaataaggc
gggttcgtggaggtcaaaactcttgcaacgttacaaatcattttcagaag
ctcgttttgggctcaaacgaagcgtataactaattagaataagattcagt
cgaggcagatgttttttcattttgaaattttgcgtaattcgcaaaaatcc
tcaactTTGCGCtatcttgatgacgtcataaaaattgaaattcaaataac
ttttgatagaatcatcaaaataatttcaaacttttaccaaagatgcattt
caatgcaaattttcaaaacatttcaaaaaattttcaaaatcttgatgacg
tcagcattttttaaggtttttagttttttgcctgaaaattgatgacgtca
tcaaatttcgttaaattttttctttaattctGAAAAGATtaataatatgc
atctttggtcaaaatttgaaattattgggatttcaatttttatgacgtca
tcaaaatagcgcaaaattgaggatttttgcgaattacgcaaaatttcaaa
atgagaaaacatctgcctagactgaatcctaTTCTTCTTAgtcatacgct
tcgtttgagcccaaaatgagcttctgaaaatgatttgtaacgttgcaagc
attttgaccccgccttaatcccctggagttccaatgcaatatcatctttt
ttggaaacagatatctatttcccaatttattatctcatctcctagaaata
ttgatccgTTTCtcgctgatgacgtcatcagctggagcggggaaacagat
agttttaaggaaaaggtctctcctagaaaatcggatctgtttcctcaatt
ttcaaaaaaagctctctcctggaaaagggaaacagatatttcgggaaaat
gggctcgttggctgcttctgcaaaaataacggactgaaactcgattgaaa
ttgtttttttatgagtTGGGATTTCATTTCCGTTGttctcaagtcagaaa
attcaatagGGATGGAAAAAAATGCAATACACtcatttctttttataagc
atgtactgaagctcaaatttccaaaaaaattaagcgctaagcataccttg
aggctcagccaaagtAATatttagaatcataatttccaaaacttcagaCA
ACAACAACATTctaaaacaatagaatgtcttcatttctctcaagattaaa
gagaggggaaaatgcgcgaaaattatttaccccccccccccccNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGAaaattttttcccccccccccctccttcataa
tttttttaccaagcatagggttaagcataagTCGAgactcaaaattgagc
tttacttaagcataatgagcttcagccgaaatttaccgtatgcttataaa
acaaaatgagtgtattTTACAATGagaatttgtttatttgattattttca
atggggacaaaaattggagtataattttctaccgcgggacgatattttga
ccaactGCTCCATTTCGTAGTAaggggttccagtgggtctgaAAAGGCGG
GTCTAATAGAGGTTAACTGAAGGCCACGACACAGCGCAAATTTAAATGTT
TCTCTGATCTTTTAGATTTACATTTACCACCCTCACATTGGCGTTTGTAT
GTAGGTGGACATGGGCGGCAGATGATATCGAATACCCTGATTTGAGTAAg
ttttgtaactttttgaaagaaaaagaatgttaagcaaaaagttaaaaccg
ACGAGTTGATTTGATGCCAtggtatacgttttttttattagaacatccaa
gccttcggatgttcttaactttttgaggttTAAGCCTAAAGATATTCTTA
TGGTGTtcttttaccattttgtgagctgctttttttggaatttcttaAGA
ATTCGGGTGTTCTAGAATTCGccgagccttaaaatgtttttaatttgctc
ttaacattttggccatcgaagccttatattcctATAAAAGAAAGCGTAAT
TGGGAAGATTTTACGCATAGTGTGCAGTTAAaacgaccaagaaaattttt
acGGCATACAGTTCCAGATGAAGCTTTCCATTTTGCTAGGAGCACCCATT
TATTCAATCTTTATTCAACGTTCTaccattcgatacgctccattattcga
tattAATGAAagccaccgtcaacaagaaacactCATTATTGACGCTCTAA
CATCcaatacgctcccttattcgatgatatAACCTAACCCAGTTAAACAT
CGAAATAGAGAACGtcaattgtatatttttacgGTATTTTCAGCGAAATG
TCCGATTCAAGTGCAACCTATGGGATGTTACAGAGATAAGGATACTCCCA
ATCGTGCTCTTCCTGATCAAATCGCTAACAGTCGGGATCCTGGATCGACA
GTTTTCATGGAACCGAATTTGAATAACCATTGGGGAAATTTTGCTGCCTT
CTTGGCAAATTTCATTTGTCAGTAAGTGTTCTTATGATTGAAGTTTTACA
CTCTCGTAGGGATACCCTTCACATTTTTTATACTATTCTGGCTCGTCGAC
TTTGTGTAGGCCCCTTTCTAATTCAAAAgtttgttgaaaatatttgccct
cgggtaagttatggcatgtctcaaaaaatgaaaatcaccataatttttag
atcgcattagtcgacagaaaatgaccaaacaaatgactgaacatgaaggg
tactatgatgtagtttctagcctgatgtgtaacctaattgttttctcgct
aatTTACGcgaaaaaccacaaaaactgattattacgtcataatcgatgac
gtcatcaaaactgaaaattgaatttctcgagaATGGTTCATCCAATTGTc
ctcaaattttcaccaaagatgcatctcaCTAAAGTcgaacatttgaaaaa
atattttcttcaaaattctgattacgtcagcaaaaagtagaatttttcgt
tttttactaatttctgctgacgtcatcaaactttcgaaaaaaaatttttc
caaaagattGACTTTGGTGAGATCAAGGAGGTGGAGACGTCCTTGGTGAG
ATATATCTTTGgtaaaagtttgaagacaattggatgaACCATTCtttaga
aattcaatttttagttttgatgacgtcatcgattatgacgtaataatcag
tttttcgcgaaaatcagtgaaaaaacaattaggttacacatcaggttaga
aactacatcatagtacccatcctgttcagtcatttgtttggtcacttctg
tcggctaatgcgatctaaaaattatggtaattttcagacatgccataact
tacccgagccGTAAtattattgagaaaaaaaggaaggtccctgaaaattt
tcaagtgcTAAAACTTACTCATGGTATGAAAAGCTTTCACTGATGAATTT
TAACATTAGATGAAACACTTATAAGtgtaggatctcaggatctaaaagct
caaaaatattccaataaGACTTAGATGAATATAGCCTGgaatttcgacca
tgattgtagtacaTTAGTTTTTACTAGCTAACATACATGCCATATCAAAA
TAAAGAATTCTTGCCTTTTTTCTTTCAGGTGTGCCAAGAAAGCGGCCAAA
GAAAAACGTGGGCAATATATTGGTATTCAATACTACGGTacgaaaaaata
tgttttataCACAATTAAACGGacagttagtttgttgtgataACACAAAA
TCTGCAACAACCTTTAGTTTCTTCAAGGGTATGTTTAGAAGAGAACTTAT
TCACTGAATTTCCAAAGAAATTGCTCCATTTGAATATTAATATATGGTTT
TCCAAAACATGACACTAGTATACCAAACAATCCTTCGAGAACAGTAAGTT
TAGAGTGGAGttacaaattcaaaaataataaatcttTCTATCGTAACAGC
TGAATGTTGGAGTGGAGAAAAAGACACAAGCGATCCTCAATCAGAAGCCT
ATAAGAAGTACGGTGAAGCTAACGCGCAATGCATTGATAATAATTATGAA
AAGTATGATGGATCTAAATCACCATGTGGTCTTNGCATTGATAATAATTA
TGAAAAGTATGATGGATCGAAATCACCATGTGGTCTTTATGCTGGTACAC
AACTCACCAATTACGTCTACAAAATCACTGAATTGGACCAAGGTAACTCA
GGATTTCGTACCCAAcccaatttttgattttattgaaggTAGTAGTGCAA
TCGTGTACAATTATGGTACAACTTGTAACTGTGAGCAATTGTCTGGTAAA
ACGGTAAAAATCCGAACTAAAGAGATGAGTCTTGGTTAACCCTGCTAATT
TTTCCAAAGAGGCTATAACTATTTGATATCTGAGCTGtaaataaaagaat
ttgaaatgCTTATCTGTTAGAAAAACTAGAGATTAATCATCTCTTTTAGC
AGTTAGCCCCTTCATTCAATATCATATCCACTCCACTTGCTAAGACTTCC
TCGCCTGGTCACAGGGACATGAGATACAAATTGACGAACCCATTCCTTGA
GCTGCAGCtatggattaaattttgcgatatCTTTATGATAGTTTATTGAG
AATTAATGAATGTTTTGTACGttacttttaatttttagaCGTTCTTTGCC
CATTACATTTCAAACCAATGGGATGTTACAACGATAACCAAGTTAAACCC
AGACCTCTGCCAGATTACATTATGAACGAGCGTGACTACACTCTACCCAA
TTGGAATGGTCACATTATTGATTGGAACGGATGGGACAAATACATGCCAG
CGCTGATATGTCGTTGTGCGATGGCTGCTAAGAAAGGGAATTATAAATAT
TTTGGTATTCAATTTTATGGTAAGCAAACTTTTTAGGCCTTCTATTGTCA
TATCATCAATAAATCTTTTCTTTGTCCCTTAAAAagtatatatacagttg
acgctctctaattcgacgttctacgtctactattcgataggctccctttt
tcgatgaaatttaaagtccccgtcaacaagaaactcacacaaacgacgct
cccttattcgataagctcctttattgggctcttccagaaaaaatccgttc
atggggggtggaggatgaattgtccaggggtattgaaaaaataccaaaaa
attgcaatgtccaggggggtaaattccaatgtccaggggtaattttttgt
gtccacggggttgatttgatgtttgtccaggggtataacccatgtccagg
gggttaaaaatcgaaatgtccaggggtaattcatgaaaaaaaaaaatata
tcctccacccccatgaacggtttttttctggaagagcccattcgatgaaa
atccgattccccttgaagatcgaataagagagcgtcaactgtatatatta
atgtatttttgaaggaaaataggGAACTCAAAGTGGGATTAATTGTTTTC
AGACTCGAAGGTGAAACTTatcattgtaattttttttaaattcttccaAA
GCTTAAATTGGTTctggcttaaaaaattttggattaaaATCTATGATCTT
TTTCCCAAAGGTGAATGTTGGGCTGGCAACGATGAAAAGGAATTAAAAAA
GGATGGAGATGCGGATAAAGACAAATGCTTGGTTAAACTTGGAGCTCCAC
CATACGGTCAATACTGTCCATCAAAGAGTGAACAAGAAGGGATGTGCCAT
CCACAATTGTGTGTTGGTGTTCAGAAGACAAACTATGTCTATGAAATGTT
ACAAGGTATTTAGTCATCTGCTCGTCCTCTGAACGAAGAATAGAGGAGTT
TAGCAAATCATATACAAGGGTATTAAATGCAAAATGATTGTTTCTTTAAC
AGTTCATAGAAcgcgagaaaattcacttcaaagaggggACTTTTTTCTGA
GACACACGGTATTTGAGCATTTTGGGCcttcaaacaaattttgaaatgtt
tttatgtttaagtaactTAAATGGAATCTCTTTAAGTCGAACATGCAATC
GGAACAAAATTCTTTTAGAGCTTTGGTGACAGACTTCcaaattttttata
tataaaaggTGCCATTCTGGTGCCATATAGTAGGGGGTCAAGCCTTGGGT
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNcaaaaaatgtattacaacaactctctgactaaaac
acacaaagaaatacagccgcttgaagttcaaaaacataccgacgtcagcA
CGAccaagacaagatttgacgtcaaatcacagtagagctgacagttagtt
ggtcttaaacCGGCTGTATTCCTTTGCGTGTTTTAGtcagttagttggtc
ttaaacCAGCTGTAttcctttgtgtgttttagtcagagagtagttttttg
ctcagaatttcatgctctatcagatggtaccaatcattttcgtttatttt
gaagTTCTCAAGCACAGGAGACGACTCTATTCCCATTTAGTTATAAGATA
TTCAAGAGCAATTCTCTCCTCTATATCACTGTTTCACAGAGCTGCTGGGA
CTTCTTTTGAACTGCTCATTAAACTGTACAGTAAAAAAGATGTCCAATGG
AAATCTCtgaaattttggcaaaagaaGGTACCATTGAAATTTCACAAAAC
TGGAGATAATGACCTCCTCAGAATGAATAGTCCATTCCAACTATGGAAAC
TATCTCATTTTATCACTGACCTGATTTGCGAAAGAGGCTttaatgaaatt
ctttttttctcaattctAGGCCCTGGACCTTGTTCCAAAAATCCATGCAA
ACCAAACGAGAAATGCATTCCCAACCCaagtttgaaagaaaaattcaaat
gtgAAGAGGTCaaagaataattttatttgaaagcatAAATCGGGTTTTGT
AACAACCATTACTGAAGAATTTTCAGAGTACTAACTTAGTTTGTAATTTG
TATTTGTTATAGTTCTTTATTATTTTGTGAATTtaacatgaaaaaaaaac
agtatgaaATCTACAATCAAATGCGtgcatatttcaatttttttttgttt
acttactCTTTTAGTCcccttttgaagaaaaagaccCCGAAAAGAAGCCG
GAGGACGACCCTACAAAACCTCCATCGAATAACGAGCCCTCAAACGAAAA
GCCCGTGTCTATTGAACCGAAAGACGAAAAACCCACATCCACTGAACCGA
AAAACGAAAAACCTGCACCTACTGAGCCCTCGAATGAAAAGCCCGCTTCC
ACTGAACCAAAAGACGAAAAACCCACATCCACTGAACCGAAAGACGAAAA
ACCCGCATCCACTGAACCGAAAGACGAAAAACCCGCATCCACTGAACCGA
AAGACGAAAAACCCACATCCACTGAACCGAAAGACGAAAAACCCGCACCC
ACTGAACCGAAAGACGAAAAACCTGCATCTACTGAGCCCTCGAACGAAAA
ACCCGCTTCCGCTGGGCCGAAAGACGAAAAACCCGCATCCACTGAACCGA
AAGACGAGAATCCTGCATCCACGGAACCGAAAGACGAAAAATCTGAATCC
ACTGAGCCGAAAGACGAAAAACCCGCATCCACTGAACCGAAAGACGAGAA
TCCTGCATCCACGGAACCGAAAGACGAAAAATCTGAATCCACTGAGCCGA
AAGACGAAAAACCCGCATCTACTGAGCCTTCGAACGAAAAACCTGCATCT
ACTGAACCGACAAACGAAATACCTGCATCTACTGAAACGAAAGACGAAAA
ACCAACATCTACTGAACCGAAAAACGAAAACCCTGCATCTATTGAACCGA
ACAATCAAGACCTAAATAAATATAATCCGCAACCAACGCAGGGAAACAGA
ATGCCACTTTGCTGTAATACAAACACTTGTAATAGAGTAACAAAATCGTT
ATGGTGTCATAAAGGCAAAATGTAAGCATAACTCAGAAAGATTACACAGT
TGTCATGATCCTGAGTGAGAAAATATGGCAAGAACTTTTATTgcaaaatc
atttttatttttaggcagttAAGTAGTATTTGCAAAACATTTAACTTGTA
CATAAATACACAATCACATTCGAAAAGCTTTCGAATTTTAGTATCATCTA
AATATCGAggattgaaaaaagtttgtttcacTTGAATTATTTCCATtgtt
cttctttaaaaaaaaattaattttgcaatattataaaatttcaaatttat
aaatattCTCTGTTATGACGTTTATAAGTTCGCATTTGTATGCAAATATT
ACTCCATTTTAAAGGACTTCCTAAGTAAAGCCTTCGGAAATGttggaatt
tgaatttttaattttgatgaatgtCTACATACAATGTATGTCTTATATAC
ATTATAAGGAGAATGGGTTCAAGTTGATCCAGGTTTTTTTACAACTTCAG
GTTACTTAAGAAGCTAATAGCAATACGGTTTAGCGGAAGACTACAGAGTT
GAATCTCCtttgtaggatttgaagccacttatttcctacaTAAGTTGCAC
GGCCCGCatggttttcatacaaacgctGAATCAAAAGTATTACATTCACC
gcaacaatttgaaaaataaaaaacgccAACGCAAAGGAAatgctacaatc
agtgccataacatattggcaattttggctattttaccattttacaaaaat
tgaagttcgagcgagattgtcaatttcgggccttcaacttgatttcatcg
aatatttcgatctgggagggatttattggtttctaggctatatttcaagc
cctaccggaccatttttgaacttttggatcctcagatcctaaggtctggC
GTTAAAACtcaagagttaaaactctacctttccaacctaatttggagcac
ttacaaatcgtttgtggttataaaatttcgtggggaatttcccttttgtg
ccaagtattttggaacTGATTGTAGATTCAATCTGTATTCCGAAACGCAG
CGCAGACCTTAAGgctttcactttttcttgtttaaaaaaaaggttgaaga
ttcgcctctagccttcggcttgaaacacATGAttaataatacaccttttc
gactgtagccgccgccaattgccgcgcaggGTTTTTTTTGCCCGTACCAG
CCTTTTTTTTGCCCCTATAGACAATAgtaaaatgtgtcaaaaaaggattc
gGTCGATTAAGGGGGATAAtcaaataattaagtggcacgcgactacggtc
gaaacgATGTATTGTCAACTATTGCCTGCTGCTATTATGGATCATAATGT
TCTGTTTAaccaaaaatataaacaaattgaCATCATACAACCTCCTTCTT
TCATAACGTTAACTAACaccactttcatttttcaagttCTTCAAAAATCT
ACCAACAAACTTCTTCTTTTTTACTTTCGACGGTTATTTCCAGCCATAAT
CATAGCAATTcgaatgaaaatgttgatagtATCCATATAAATACCGATCG
AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045253XLOC_045253Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072945-exon-scaffold_86-1491911889:1133088..1133118TCONS_00072945-exon-scaffold_86-1491911889:1133088..1133118Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1133088..1133118TCONS_00072945-exon-scaffold_86-1510915933:1133088..1133118Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1133088..1133118TCONS_00072945-exon-scaffold_86-1575043694:1133088..1133118Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1133557..1133636TCONS_00072945-exon-scaffold_86-1491911889:1133557..1133636Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1133557..1133636TCONS_00072945-exon-scaffold_86-1510915933:1133557..1133636Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1133557..1133636TCONS_00072945-exon-scaffold_86-1575043694:1133557..1133636Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1142431..1142608TCONS_00072945-exon-scaffold_86-1491911889:1142431..1142608Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1142431..1142608TCONS_00072945-exon-scaffold_86-1510915933:1142431..1142608Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1142431..1142608TCONS_00072945-exon-scaffold_86-1575043694:1142431..1142608Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1143716..1143774TCONS_00072945-exon-scaffold_86-1491911889:1143716..1143774Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1143716..1143774TCONS_00072945-exon-scaffold_86-1510915933:1143716..1143774Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1143716..1143774TCONS_00072945-exon-scaffold_86-1575043694:1143716..1143774Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1144037..1144279TCONS_00072945-exon-scaffold_86-1491911889:1144037..1144279Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1144037..1144279TCONS_00072945-exon-scaffold_86-1510915933:1144037..1144279Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1144037..1144279TCONS_00072945-exon-scaffold_86-1575043694:1144037..1144279Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1144726..1144956TCONS_00072945-exon-scaffold_86-1491911889:1144726..1144956Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1144726..1144956TCONS_00072945-exon-scaffold_86-1510915933:1144726..1144956Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1144726..1144956TCONS_00072945-exon-scaffold_86-1575043694:1144726..1144956Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1145648..1145842TCONS_00072945-exon-scaffold_86-1491911889:1145648..1145842Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1145648..1145842TCONS_00072945-exon-scaffold_86-1510915933:1145648..1145842Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1145648..1145842TCONS_00072945-exon-scaffold_86-1575043694:1145648..1145842Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1146957..1147045TCONS_00072945-exon-scaffold_86-1491911889:1146957..1147045Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1146957..1147045TCONS_00072945-exon-scaffold_86-1510915933:1146957..1147045Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1146957..1147045TCONS_00072945-exon-scaffold_86-1575043694:1146957..1147045Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1147252..1149639TCONS_00072945-exon-scaffold_86-1491911889:1147252..1149639Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1147252..1149639TCONS_00072945-exon-scaffold_86-1510915933:1147252..1149639Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1147252..1149639TCONS_00072945-exon-scaffold_86-1575043694:1147252..1149639Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1133088..1149639 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0231821	0.0110663	0	0	0	0.00125924	1.21685	0.989929	1.03114	0.844849	2.59394	5.75339	3.2733	3.48545	3.029	7.20816	0.697798	0.507452	0.035713	0.0253446	0.548453	0.352956	0.405067	0.504497	0.00732531	0.290147	1.14853	0.710172	0	0.0265919
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072945 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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