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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072881 ID=TCONS_00072881|Name=TCONS_00072881|organism=Clytia hemisphaerica|type=transcript|length=2164bp ggaaagcgaaatgCGAAATGTTACATTCAAATATTGTACACAGCGATACA AATCAGATTTCAAGCTCATTTTCAGCATTATTGAAAGCTGGACGAGAAAA TGGAAATAGCGCAAAGTTGAACCTATGGAAGAAGCGTACAAACCTATCTG CTTTAGAAGTTGATTCTTAAGCTTTCATGATCAATTTTAACAGCAGAATT TGGATGGAAAGGATCTATAACAgacaatgaaaatgttgaaatcgTTATTG TGCTATTATCTGGTTTTAAGTTGTATATCCTATACACTTACTTTTACTGC CAAGGCTGTTCCAATTGTAAAAGTTGAGGGAAAAGGTGGTGATTTACTTG ACAATCTAAAGAAACCACAGAAAGTTTTATTGGTGTCTATCGATGGTTTC CGTTGGGATTTACACAAAATAACCGACACACCAAATATTGATCGAGTGAT TAAGAATGGAGTAACAGTAGATCACGTGTTAAATGTTTTTCCAACTAAAA CATTACCCAACCATCAAAGTATTGTAACAGGGCTTTTCCCTGAGCATCAT GGCATGGTTGATAATGATTTTATGGATCGAAAAACTGGTGCTAGATTCTA TCTGGCAAGCGATGACTGTATGACTAATACCACGTGGTGGGATCAAAGTC TTCCAATCTGGATTCAAATTCAACGCAAAACGGGTTACAAAACTGGCAAT CTCTTTTGGCCTGGTTATAGAGTCCCTTATAAGAATTACCAAAGAGATAA AAATCACCCAGTCAATGAAACATCATTCTTCCTACCATccagaaaacatt cgaaagactATGAAGGCGGTAAAGGCGATTATAAGAAATCCTTATACAAG GCTATGCACAAAGCTTATAGATGGTTGAAAAGAGATGATACGATCTTTGT ATCTTTATACTCAATGGAGCCGGATACCACTTTACATGAGAATGGTGTGG AGCATGATAAAGTGAAACGAGAAGTCGAAAAGGTGGACCAATTTGTTGGA GCGATTTATGATAGGATTACCAGTGATGAGAAATTGAAAGACCAAGTCAA TGTTATCTTTGTTGGCGACCATGGTCATATCACAACAACGTCTGACCGAA TGATCGACCTTTCAAGGCTCGTCAACATTAAGGATGACATCGAAGGGCTT TTTGGATTCACAAACGTTTTCCTATATACCAAACCAAACAAGACCGCCAA AGTGtacaagaaattgaagaaattcaGTGAGAAATCGACCACTTTTagag tgtttttgaaaaaagatatccCAAAGTATTTACACGTTGGTAATAATTCA AGGACAGGTGATATATTGATTTTACCGGAACCTGGATGGATTGTCGTTGA TAAAACGGCATTAGCGGAATATTTACAGAAACCGAACTGGATTAGGTCAG AGCATGGTTATGATAGTTTAAACCGAGAAATGAATCCGGGCTTTTTTGCT TTTGGTCCTATGTTCAAGAAAGGTTTTAAAAAGCCTTGTATCAAAACTGT AGATTTATATGGATTGATGTGCAAAATACTGGGTATGGAACCAAGCCAAA ACGATGGAAAATTTGAGAGAGTAAAACCACTATTGGCAACCAAACAAAAA CTGAGGAAAAAGAAGGGCAATAGGAAGAAAGCGTCTCAGAGAGGAACTAT TCAAAAAGTGACATCAGTTAAGGGGAAAATTCAAGGGACAAAGAACATGg ggaaaatcattttcaaaaagaaaaaacaaaaaagcaaaaataaccaatca aaaacaaagaatgacaaaagccgaaatgaagatgaagatgaaaaaaagca GGATCAAgacgaagaagatgaaaaagacGGAGGTGATGAATATGACGAAG ACGACGACATAGATGACGTAACcagtgaagatgaagatgacGTAATCAGT GGAGAcgacgatgacgtcattgatgatgatgacgacGATTACGGTGACAA TGGAGGGGAATATGATAGCGATGAATTCCCGATCGTatgtaaataaaatg aaaatatattcttATGTTTGAATCTTTTTTATCGTACACCAATAATTCAT AAAATTTGTATATAGAAAAGAATTTCggaaaaaggtaattttttggaaat attaagCTTTGCTTTTGAATTTGCTACACAAACCcttctaaaaataattt tagctACCACCCGA Run BLAST on NCBI protein sequence of TCONS_00072881-protein >TCONS_00072881-protein ID=TCONS_00072881-protein|Name=TCONS_00072881-protein|organism=Clytia hemisphaerica|type=polypeptide|length=589bp
MKMLKSLLCYYLVLSCISYTLTFTAKAVPIVKVEGKGGDLLDNLKKPQKV LLVSIDGFRWDLHKITDTPNIDRVIKNGVTVDHVLNVFPTKTLPNHQSIV TGLFPEHHGMVDNDFMDRKTGARFYLASDDCMTNTTWWDQSLPIWIQIQR KTGYKTGNLFWPGYRVPYKNYQRDKNHPVNETSFFLPSRKHSKDYEGGKG DYKKSLYKAMHKAYRWLKRDDTIFVSLYSMEPDTTLHENGVEHDKVKREV EKVDQFVGAIYDRITSDEKLKDQVNVIFVGDHGHITTTSDRMIDLSRLVN IKDDIEGLFGFTNVFLYTKPNKTAKVYKKLKKFSEKSTTFRVFLKKDIPK YLHVGNNSRTGDILILPEPGWIVVDKTALAEYLQKPNWIRSEHGYDSLNR EMNPGFFAFGPMFKKGFKKPCIKTVDLYGLMCKILGMEPSQNDGKFERVK PLLATKQKLRKKKGNRKKASQRGTIQKVTSVKGKIQGTKNMGKIIFKKKK QKSKNNQSKTKNDKSRNEDEDEKKQDQDEEDEKDGGDEYDEDDDIDDVTS EDEDDVISGDDDDVIDDDDDDYGDNGGEYDSDEFPIVCK Run BLAST on NCBI transcript from alignment at scaffold_86:454398..457034+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072881 ID=TCONS_00072881|Name=TCONS_00072881|organism=Clytia hemisphaerica|type=transcript|length=2637bp|location=Sequence derived from alignment at scaffold_86:454398..457034+ (Clytia hemisphaerica) ggaaagcgaaatgCGAAATGTTACATTCAAATATTGTACACAGCGATACA
AATCAGATTTCAAGCTCATTTTCAGCATTATTGAAAGCTGGACGAGAAAA
TGGAAATAGCGCAAAGTTGAACCTATGGAAGAAGCGTACAAACCTATCTG
CTTTAGAAGTTGATTCTTAAGCTTTCATGATCAATTTTAACAGCAGAATT
TGGATGGAAAGGATCTATAACAgacaatgaaaatgttgaaatcgTTATTG
TGCTATTATCTGGTTTTAAGTTGTATATCCTATACACTTACTTTTACTGC
CAAGGCTGTTCCAATTGTAAAAGTTGAGGGAAAAGGTGGTGATTTACTTG
ACAATCTAAAGAAACCACAGAAAGTTTTATTGGTGTCTATCGATGGTTTC
CGTTGGGATTTACACAAAATAACCGACACACCAAATATTGATCGAGTGAT
TAAGAATGGAGTAACAGTAGATCACGTGTTAAATGTTTTTCCAACTAAAA
CATTACCCAACCATCAAAGTATTGTAACAGGGCTTTTCCCTGAGCATCAT
GGCATGGTTGATAATGATTTTATGGATCGAAAAACTGGTGCTAGATTCTA
TCTGGCAAGCGATGACTGTATGACTAATACCACGTGGTGGGATCAAAGTC
TTCCAATCTGGATTCAAATTCAACGCAAAACGGGTTACAAAACTGGCAAT
CTCTTTTGGCCTGGTTATAGAGTCCCTTATAAGAATTACCAAAGAGATAA
AAATCACCCAGTCAATGAAACATCATTCTTCCTACCATccagaaaacatt
cgaaagactATGAAGGCGGTAAAGGCGATTATAAGAAATCCTTATACAAG
GCTATGCACAAAGCTTATAGATGGTTGAAAAGAGATGATACGATCTTTGT
ATCTTTATACTCAATGGAGCCGGATACCACTTTACATGAGAATGGTGTGG
AGCATGATAAAGTGAAACGAGAAGTCGAAAAGGTGGACCAATTTGTTGGA
GCGATTTATGATAGGATTACCAGTGATGAGAAATTGAAAGACCAAGTCAA
TGTTATCTTTGTTGGTAAGTCATACTACTTTGGGCGTACGTTTTTTTCAC
GTATCTTGcacttgttcttaaaaaataattttcaacatATTCTCaacatt
tgtaaatttttacgCCCACTTATTGTCTCCGATTCGGAGAATCTTTCTGA
CTTGAAGTCGACATTGGTTTTTGTAATATCAGCAGTAAAGAGAAGTTTGA
GTTTTATGGGCTCGCCAaggggctggcgtgacacgtgaatgaACCTTTTT
TTCTGCCGTGAATACATGAATTGAAATATCAGCGTGAACGTAAAAATAag
atattttttgcgtgaatacgtgaattggcaaaaatttgtacgtggatacg
tgaattgagggtcgacttGGGGGCCTTTTTAGTGTAAAACTTCAAAAGAA
CCCTAAAAGAAGAACCTCTGAAAGTTTAATCAAACTTCTTGAAATCTTAA
TATTGAAAGTtaattattttctattttctctctGAAGGCGACCATGGTCA
TATCACAACAACGTCTGACCGAATGATCGACCTTTCAAGGCTCGTCAACA
TTAAGGATGACATCGAAGGGCTTTTTGGATTCACAAACGTTTTCCTATAT
ACCAAACCAAACAAGACCGCCAAAGTGtacaagaaattgaagaaattcaG
TGAGAAATCGACCACTTTTagagtgtttttgaaaaaagatatccCAAAGT
ATTTACACGTTGGTAATAATTCAAGGACAGGTGATATATTGATTTTACCG
GAACCTGGATGGATTGTCGTTGATAAAACGGCATTAGCGGAATATTTACA
GAAACCGAACTGGATTAGGTCAGAGCATGGTTATGATAGTTTAAACCGAG
AAATGAATCCGGGCTTTTTTGCTTTTGGTCCTATGTTCAAGAAAGGTTTT
AAAAAGCCTTGTATCAAAACTGTAGATTTATATGGATTGATGTGCAAAAT
ACTGGGTATGGAACCAAGCCAAAACGATGGAAAATTTGAGAGAGTAAAAC
CACTATTGGCAACCAAACAAAAACTGAGGAAAAAGAAGGGCAATAGGAAG
AAAGCGTCTCAGAGAGGAACTATTCAAAAAGTGACATCAGTTAAGGGGAA
AATTCAAGGGACAAAGAACATGgggaaaatcattttcaaaaagaaaaaac
aaaaaagcaaaaataaccaatcaaaaacaaagaatgacaaaagccgaaat
gaagatgaagatgaaaaaaagcaGGATCAAgacgaagaagatgaaaaaga
cGGAGGTGATGAATATGACGAAGACGACGACATAGATGACGTAACcagtg
aagatgaagatgacGTAATCAGTGGAGAcgacgatgacgtcattgatgat
gatgacgacGATTACGGTGACAATGGAGGGGAATATGATAGCGATGAATT
CCCGATCGTatgtaaataaaatgaaaatatattcttATGTTTGAATCTTT
TTTATCGTACACCAATAATTCATAAAATTTGTATATAGAAAAGAATTTCg
gaaaaaggtaattttttggaaatattaagCTTTGCTTTTGAATTTGCTAC
ACAAACCcttctaaaaataattttagctACCACCCGA Coding sequence (CDS) from alignment at scaffold_86:454398..457034+ >TCONS_00072881 ID=TCONS_00072881|Name=TCONS_00072881|organism=Clytia hemisphaerica|type=CDS|length=3540bp|location=Sequence derived from alignment at scaffold_86:454398..457034+ (Clytia hemisphaerica) atgaaaatgttgaaatcgTTATTGTGCTATTATCTGGTTTTAAGTTGTAT ATCCTATACACTTACTTTTACTGCCAAGGCTGTTCCAATTGTAAAAGTTG AGGGAAAAGGTGGTGATTTACTTGACAATCTAAAGAAACCACAGAAAGTT TTATTGGTGTCTATCGATGGTTTCCGTTGGGATTTACACAAAATAACCGA CACACCAAATATTGATCGAGTGATTAAGAATGGAGTAACAGTAGATCACG TGTTAAATGTTTTTCCAACTAAAACATTACCCAACCATCAAAGTATTGTA ACAGGGCTTTTCCCTGAGCATCATGGCATGGTTGATAATGATTTTATGGA TCGAAAAACTGGTGCTAGATTCTATCTGGCAAGCGATGACTGTATGACTA ATACCACGTGGTGGGATCAAAGTCTTCCAATCTGGATTCAAATTCAACGC AAAACGGGTTACAAAACTGGCAATCTCTTTTGGCCTGGTTATAGAGTCCC TTATAAGAATTACCAAAGAGATAAAAATCACCCAGTCAATGAAACATCAT TCTTCCTACCATccagaaaacattcgaaagactATGAAGGCGGTAAAGGC GATTATAAGAAATCCTTATACAAGGCTATGCACAAAGCTTATAGATGGTT GAAAAGAGATGATACGATCTTTGTATCTTTATACTCAATGGAGCCGGATA CCACTTTACATGAGAATGGTGTGGAGCATGATAAAGTGAAACGAGAAGTC GAAAAGGTGGACCAATTTGTTGGAGCGATTTATGATAGGATTACCAGTGA TGAGAAATTGAAAGACCAAGTCAATGTTATCTTTGTTGGCGACCATGGTC ATATCACAACAACGTCTGACCGAATGATCGACCTTTCAAGGCTCGTCAAC ATTAAGGATGACATCGAAGGGCTTTTTGGATTCACAAACGTTTTCCTATA TACCAAACCAAACAAGACCGCCAAAGTGtacaagaaattgaagaaattca GTGAGAAATCGACCACTTTTagagtgtttttgaaaaaagatatccCAAAG TATTTACACGTTGGTAATAATTCAAGGACAGGTGATATATTGATTTTACC GGAACCTGGATGGATTGTCGTTGATAAAACGGCATTAGCGGAATATTTAC AGAAACCGAACTGGATTAGGTCAGAGCATGGTTATGATAGTTTAAACCGA GAAATGAATCCGGGCTTTTTTGCTTTTGGTCCTATGTTCAAGAAAGGTTT TAAAAAGCCTTGTATCAAAACTGTAGATTTATATGGATTGATGTGCAAAA TACTGGGTATGGAACCAAGCCAAAACGATGGAAAATTTGAGAGAGTAAAA CCACTATTGGCAACCAAACAAAAACTGAGGAAAAAGAAGGGCAATAGGAA GAAAGCGTCTCAGAGAGGAACTATTCAAAAAGTGACATCAGTTAAGGGGA AAATTCAAGGGACAAAGAACATGgggaaaatcattttcaaaaagaaaaaa caaaaaagcaaaaataaccaatcaaaaacaaagaatgacaaaagccgaaa tgaagatgaagatgaaaaaaagcaGGATCAAgacgaagaagatgaaaaag acGGAGGTGATGAATATGACGAAGACGACGACATAGATGACGTAACcagt gaagatgaagatgacGTAATCAGTGGAGAcgacgatgacgtcattgatga tgatgacgacGATTACGGTGACAATGGAGGGGAATATGATAGCGATGAAT TCCCGATCGTatgtaaataaatgaaaatgttgaaatcgTTATTGTGCTAT TATCTGGTTTTAAGTTGTATATCCTATACACTTACTTTTACTGCCAAGGC TGTTCCAATTGTAAAAGTTGAGGGAAAAGGTGGTGATTTACTTGACAATC TAAAGAAACCACAGAAAGTTTTATTGGTGTCTATCGATGGTTTCCGTTGG GATTTACACAAAATAACCGACACACCAAATATTGATCGAGTGATTAAGAA TGGAGTAACAGTAGATCACGTGTTAAATGTTTTTCCAACTAAAACATTAC CCAACCATCAAAGTATTGTAACAGGGCTTTTCCCTGAGCATCATGGCATG GTTGATAATGATTTTATGGATCGAAAAACTGGTGCTAGATTCTATCTGGC AAGCGATGACTGTATGACTAATACCACGTGGTGGGATCAAAGTCTTCCAA TCTGGATTCAAATTCAACGCAAAACGGGTTACAAAACTGGCAATCTCTTT TGGCCTGGTTATAGAGTCCCTTATAAGAATTACCAAAGAGATAAAAATCA CCCAGTCAATGAAACATCATTCTTCCTACCATccagaaaacattcgaaag actATGAAGGCGGTAAAGGCGATTATAAGAAATCCTTATACAAGGCTATG CACAAAGCTTATAGATGGTTGAAAAGAGATGATACGATCTTTGTATCTTT ATACTCAATGGAGCCGGATACCACTTTACATGAGAATGGTGTGGAGCATG ATAAAGTGAAACGAGAAGTCGAAAAGGTGGACCAATTTGTTGGAGCGATT TATGATAGGATTACCAGTGATGAGAAATTGAAAGACCAAGTCAATGTTAT CTTTGTTGGCGACCATGGTCATATCACAACAACGTCTGACCGAATGATCG ACCTTTCAAGGCTCGTCAACATTAAGGATGACATCGAAGGGCTTTTTGGA TTCACAAACGTTTTCCTATATACCAAACCAAACAAGACCGCCAAAGTGta caagaaattgaagaaattcaGTGAGAAATCGACCACTTTTagagtgtttt tgaaaaaagatatccCAAAGTATTTACACGTTGGTAATAATTCAAGGACA GGTGATATATTGATTTTACCGGAACCTGGATGGATTGTCGTTGATAAAAC GGCATTAGCGGAATATTTACAGAAACCGAACTGGATTAGGTCAGAGCATG GTTATGATAGTTTAAACCGAGAAATGAATCCGGGCTTTTTTGCTTTTGGT CCTATGTTCAAGAAAGGTTTTAAAAAGCCTTGTATCAAAACTGTAGATTT ATATGGATTGATGTGCAAAATACTGGGTATGGAACCAAGCCAAAACGATG GAAAATTTGAGAGAGTAAAACCACTATTGGCAACCAAACAAAAACTGAGG AAAAAGAAGGGCAATAGGAAGAAAGCGTCTCAGAGAGGAACTATTCAAAA AGTGACATCAGTTAAGGGGAAAATTCAAGGGACAAAGAACATGgggaaaa tcattttcaaaaagaaaaaacaaaaaagcaaaaataaccaatcaaaaaca aagaatgacaaaagccgaaatgaagatgaagatgaaaaaaagcaGGATCA AgacgaagaagatgaaaaagacGGAGGTGATGAATATGACGAAGACGACG ACATAGATGACGTAACcagtgaagatgaagatgacGTAATCAGTGGAGAc gacgatgacgtcattgatgatgatgacgacGATTACGGTGACAATGGAGG GGAATATGATAGCGATGAATTCCCGATCGTatgtaaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00072881-exon-scaffold_86-1491911889:454398..455461 | TCONS_00072881-exon-scaffold_86-1491911889:454398..455461 | Clytia hemisphaerica | exon |
TCONS_00072881-exon-scaffold_86-1510915933:454398..455461 | TCONS_00072881-exon-scaffold_86-1510915933:454398..455461 | Clytia hemisphaerica | exon |
TCONS_00072881-exon-scaffold_86-1575043694:454398..455461 | TCONS_00072881-exon-scaffold_86-1575043694:454398..455461 | Clytia hemisphaerica | exon |
TCONS_00072881-exon-scaffold_86-1491911889:455935..457034 | TCONS_00072881-exon-scaffold_86-1491911889:455935..457034 | Clytia hemisphaerica | exon |
TCONS_00072881-exon-scaffold_86-1510915933:455935..457034 | TCONS_00072881-exon-scaffold_86-1510915933:455935..457034 | Clytia hemisphaerica | exon |
TCONS_00072881-exon-scaffold_86-1575043694:455935..457034 | TCONS_00072881-exon-scaffold_86-1575043694:455935..457034 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_86 | supercontig | scaffold_86:454398..457034 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR002591 | Phosphodiest/P_Trfase |
IPR017849 | Alkaline_Pase-like_a/b/a |
IPR017850 | Alkaline_phosphatase_core |
Vocabulary: Molecular Function
Term | Definition |
GO:0003824 | catalytic activity |
Vocabulary: Biological Process
Term | Definition |
GO:0008152 | metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0008152 |
metabolic process |
molecular_function |
GO:0003824 |
catalytic activity |
Blast
BLAST of TCONS_00072881 vs. Swiss-Prot (Human)
Match: ENPP4 (Bis(5'-adenosyl)-triphosphatase ENPP4 OS=Homo sapiens GN=ENPP4 PE=1 SV=3) HSP 1 Score: 187.578 bits (475), Expect = 1.136e-51 Identity = 142/412 (34.47%), Postives = 206/412 (50.00%), Query Frame = 2
Query: 365 PQKVLLVSIDGFRWDLHKITDTPNIDRVIKNGVTVDHVLNVFPTKTLPNHQSIVTGLFPEHHGMVDNDFMDRKTGARFYLASDDCMTNTTWWDQSLPIWIQIQRKTGYKTGNLFWPGYRVPYKNYQRDKNHPVNETSFFLPSRKHSXXXXXXXXXXXXSLYKAMHKAYRWLKRDD--TIFVSLYSMEPDTTLHENGVE-HDKVKREVEKVDQFVGAIYDRITSDEKLKDQVNVIFVGDHGHITTTSDRMIDLSRLVNIKDDIEGLFGFTNV-FLYTKPNKTAKVYKKLKKFSEKSTTFRVFLKKDIPKYLHVGNNSRTGDILILPEPGWIVVDKTALAEYLQKPNWIRSEHGYDSLNREMNXXXXXXXXXXXXXXXXXCIKTVDLYGLMCKILGMEPSQNDGKFERVKPLLA 1588
P K+LLVS DGFR D K + P++ IK GV V+HV NVF TKT PNH SIVTGL+ E HG+V N D T F SD + WW++++PIW+ Q + + WPG VP + +S+F+ + S + ++ WL + F +LY EPD + H+ G E + + R ++K+D +G + R+ L + +NVI DHG + DR+I+L ++ L + V + K N+T +VY KLK S V+LK+DIP + +N R I+++ + GW +V L E QK +HGYD+ M+P A GP F KG+K I VD+Y +MC ILG++P N+G F K LL
Sbjct: 25 PPKLLLVSFDGFRADYLKNYEFPHLQNFIKEGVLVEHVKNVFITKTFPNHYSIVTGLYEESHGIVANSMYDAVTKKHF---SDSNDKDPFWWNEAVPIWVTNQLQENRSSAAAMWPGTDVPIHD---------TISSYFM------------NYNSSVSFEERLNNITMWLNNSNPPVTFATLYWEEPDASGHKYGPEDKENMSRVLKKIDDLIGDLVQRLKM-LGLWENLNVIITSDHGMTQCSQDRLINLDSCID--HSYYTLIDLSPVAAILPKINRT-EVYNKLKNCSPH---MNVYLKEDIPNRFYYQHNDRIQPIILVADEGWTIV----LNESSQK----LGDHGYDNSLPSMHPFLAAHGPAFHKGYKHSTINIVDIYPMMCHILGLKPHPNNGTFGHTKCLLV 397
The following BLAST results are available for this feature:
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