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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072686 ID=TCONS_00072686|Name=TCONS_00072686|organism=Clytia hemisphaerica|type=transcript|length=1508bp
TACTCTTTTGAGTGCTGGGTAGCCCATTTAGAAGTGGCACTGCCAACTTG
TTTGGGTGATTTCTTTTAGTTTAGGATAACTCGACAGCAGGATGGAGGCC
GCGATCGTGATGCAGGCCGAACTcaaattttctggaaatttggtTTTTAG
AAAGAGGATGACCTCAGTCAATGGCGTAACATCGTATTTTAGGTTTTCTG
TCAAAGTAGAAATTAAGGAAGAATTAGATAGTTTGTCGAGATCTCTGAAT
TGGAGAACCATTTACAGTTTTGGTTCAAATGATAGttttaaatattataa
ataTGATAACTAATTAATAAACATAACTTGGCTTTTTAATTGAACACCAA
CTATCGCCAGTTCCAACTCAGCAACGAGCAACGGTACTCTTTTGAGTGCT
GGGTAGCCCATTTAGAAGTGACACTGTCAACTTGTTTGGGTGATTTCTTT
TAGTTTAGGATAACTCGACAGCAGGATGGAGGCCGCGATCGTGACGCAGG
CCGAACTcaaattttctggaaatttggtTTTTAGAAAGAGGATGACCTCA
GTCAATGGCGTAACATCGTATTTCaggttttctttcaaaatagaaattaa
GGAAGAATTAGATAGTTTGTCGAGATCTCTGAATTGGAGAACCATTTACA
GTTTTGGTTCAAATGATAGttttaaatattataaataTGATAActaatta
ataattaataaacatAACTTGGCTTTTTAATTGAACACCAACCATCGCCA
GTTCCAACTCAGCAACGAGCAACGGTACTCTTTTGAGTGCTGGGTAGCCC
ATTTAGACGTGGCACTGCCAACTTGTTTGGGGCGATTTCTTTTAGTTTGG
GATAACTCGACAGCAGGATGGAGGCCGCGATCGTAATGCAGGCCGAACTT
AAATTTTCTGGGAATTTGTTTTTTAGAAAGAGGATGACCTCAGTCAATGG
CGTAACATCGTATTTCaggttttctgtcaaaatagAAATTAAGGAAGAAT
AAGATAGTTTGTCGAGATCTCTGAATTGGAGAACCATTTACAGTTTTGGT
TCATATGACAGTTTTAGATATTGTGACGAAGGGAAGTTAGGCGATTGGGG
TCACCCTTTAGTTATTGAGGGGACCTCTCAGATCACTTATCTGTTCCTTC
GATCAGGGTATCCCTTATTGGGGATAAGTCTATGGGCACGTAGTAAAGGT
ACGCTAATAGATTTCAATCAACATCAATTCTGTTTCTCCAATTAAgcaat
aaatatcaaataagCATCAAATAAATTAGTAACTCTGGCATATAATTAAC
GATAGTCTCTGTTCAAGTCCTTCTCCTTCAAGTTCTCCCTTTCAAGTCCc
tgatttctttccttttctcaCTCATAATCTCTCGCCCTATTCAGAGGTCT
GAGCTCGAGGGCCTGAGCCCCACTCTATTGATGTCTATTCATTTTTCAGT
TCATTAACATCGTGTTGGCTCAGTCCCAACCTCCTTTGCATTATTCATTT
TCGTTTAc Run BLAST on NCBI transcript from alignment at scaffold_82:235355..236862+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072686 ID=TCONS_00072686|Name=TCONS_00072686|organism=Clytia hemisphaerica|type=transcript|length=1508bp|location=Sequence derived from alignment at scaffold_82:235355..236862+ (Clytia hemisphaerica)
TACTCTTTTGAGTGCTGGGTAGCCCATTTAGAAGTGGCACTGCCAACTTG
TTTGGGTGATTTCTTTTAGTTTAGGATAACTCGACAGCAGGATGGAGGCC
GCGATCGTGATGCAGGCCGAACTcaaattttctggaaatttggtTTTTAG
AAAGAGGATGACCTCAGTCAATGGCGTAACATCGTATTTTAGGTTTTCTG
TCAAAGTAGAAATTAAGGAAGAATTAGATAGTTTGTCGAGATCTCTGAAT
TGGAGAACCATTTACAGTTTTGGTTCAAATGATAGttttaaatattataa
ataTGATAACTAATTAATAAACATAACTTGGCTTTTTAATTGAACACCAA
CTATCGCCAGTTCCAACTCAGCAACGAGCAACGGTACTCTTTTGAGTGCT
GGGTAGCCCATTTAGAAGTGACACTGTCAACTTGTTTGGGTGATTTCTTT
TAGTTTAGGATAACTCGACAGCAGGATGGAGGCCGCGATCGTGACGCAGG
CCGAACTcaaattttctggaaatttggtTTTTAGAAAGAGGATGACCTCA
GTCAATGGCGTAACATCGTATTTCaggttttctttcaaaatagaaattaa
GGAAGAATTAGATAGTTTGTCGAGATCTCTGAATTGGAGAACCATTTACA
GTTTTGGTTCAAATGATAGttttaaatattataaataTGATAActaatta
ataattaataaacatAACTTGGCTTTTTAATTGAACACCAACCATCGCCA
GTTCCAACTCAGCAACGAGCAACGGTACTCTTTTGAGTGCTGGGTAGCCC
ATTTAGACGTGGCACTGCCAACTTGTTTGGGGCGATTTCTTTTAGTTTGG
GATAACTCGACAGCAGGATGGAGGCCGCGATCGTAATGCAGGCCGAACTT
AAATTTTCTGGGAATTTGTTTTTTAGAAAGAGGATGACCTCAGTCAATGG
CGTAACATCGTATTTCaggttttctgtcaaaatagAAATTAAGGAAGAAT
AAGATAGTTTGTCGAGATCTCTGAATTGGAGAACCATTTACAGTTTTGGT
TCATATGACAGTTTTAGATATTGTGACGAAGGGAAGTTAGGCGATTGGGG
TCACCCTTTAGTTATTGAGGGGACCTCTCAGATCACTTATCTGTTCCTTC
GATCAGGGTATCCCTTATTGGGGATAAGTCTATGGGCACGTAGTAAAGGT
ACGCTAATAGATTTCAATCAACATCAATTCTGTTTCTCCAATTAAgcaat
aaatatcaaataagCATCAAATAAATTAGTAACTCTGGCATATAATTAAC
GATAGTCTCTGTTCAAGTCCTTCTCCTTCAAGTTCTCCCTTTCAAGTCCc
tgatttctttccttttctcaCTCATAATCTCTCGCCCTATTCAGAGGTCT
GAGCTCGAGGGCCTGAGCCCCACTCTATTGATGTCTATTCATTTTTCAGT
TCATTAACATCGTGTTGGCTCAGTCCCAACCTCCTTTGCATTATTCATTT
TCGTTTAc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072686-exon-scaffold_82-1491911889:235355..236862 | TCONS_00072686-exon-scaffold_82-1491911889:235355..236862 | Clytia hemisphaerica | exon |
| TCONS_00072686-exon-scaffold_82-1510915933:235355..236862 | TCONS_00072686-exon-scaffold_82-1510915933:235355..236862 | Clytia hemisphaerica | exon |
| TCONS_00072686-exon-scaffold_82-1575043694:235355..236862 | TCONS_00072686-exon-scaffold_82-1575043694:235355..236862 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_82 | supercontig | scaffold_82:235355..236862 + |
Blast
The following BLAST results are available for this feature:
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