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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072415 ID=TCONS_00072415|Name=TCONS_00072415|organism=Clytia hemisphaerica|type=transcript|length=1687bp
taaatccACTCCACTTTTTGATCTTACTGGTATTTACACTATGTAGTTTG
ATTGAACaggtttttttcgtttttttttattgaagagTAATCATTTAAAT
CAGTTTAATCAAtcaaaatcaagttaaaatggTAAAAGATAAAGGCCACT
TTGATgttgaaaatgcaaaattatGTCCCTTATAACACCGGCTCTCAATC
CACTGCGACCAAAAAACAACGCTAATATCAGCCAGCGTAAAAAGGGCTGA
TAAAGTATCAAAGTTATTGTTGGGGATTGGTATAATAAGTAGCTTTCATA
TCCCATAGTTCAGGAGATCCCAAGATACTCTCTGAGACATTTCGGTAGAT
TATCATTCAGAAAGTTGTCACTGAAACTTCTCAAGCAAGCCATTCGTGCC
ATATGTTTCAaggagattttcaaatgattatATGGCGGAGTCACTTTCGC
AAATTGTAGCACATATTTTGCATTTTGGAAAGCTATCTCCTGCATGTGTA
AATTGAATGAAAAGTCACCAGTCCAACTCTTGAAATCATAAATTATACTT
TGTTCTCCCGATCCAAAATCATACAAATAAATTGACATAGAGCAATTGTG
TCCTTCTGGAGGGACTTGAAGGCCAATGACGAAGTACTGGTCAAAACATT
CCACAACTTTGTTGAAAAAGATATGTTTTCCTTGGTAAAGCAAATTGATT
CTTTTCAATGGGATAACCTCATTTTTGCTGTTGACTTGAAagaattttaa
gctttttaccCTCGTTTTGATATCGCTCAAGTGCATAAAGAACACAGATT
TTGACAAATGGTACAACATTTGATCCTCGAAAGTCTCTTTTTCATCATCA
ATAGTCACTCGTTCAGCCAGAACttgatttcctgaaaaatcgaAACCAGA
TATAAACGGACCATAACCATAGTCGTGGATAAAAATTCTCTCCGAACTAA
TATCTAGGGACAGCTCGAGATCTATATAGGATGTGTCGAATGGACCGGGT
TCGAAACCAAGCTCAGTGCAATTACTCAGCACAACACGCTTGAAATGTGA
TAGCTTTGTCTTTTCCATTAAGACAATATCAGCCACAAAATTAAAATCAC
CGGTAGAAACAAGCAACATTAAGACGTAACCATATTCTTTGGTTTTTCCC
TGCCAAAAACATTGGATGCATTGCAAAGCTTTATATGGCTCCAGTTCAAT
TACACAATCCTCCGTTTCTTGAAAAGTGGTCGATACAATACTTCCTGGAG
GAGCCCCTAAAAGGTGTTTCAAGCTTCCACTGTGTAATATTAAAGGTTGG
CTCCCATCTTCCAAAGTCGAAGACTTCTCCAATATTAACCAACGATTAAG
TGAAGCGTTATAGGGCCAATCatattccaaaaaattagattCGTTCCACG
TTGGTAATTTAATCAAACTCGTTTGTAATTTAGCTGTTTCCTCATTGAAT
GAATAAACAGTGATGACATGATCATCTGTGCTGTCCCGTTGCCTGGTATA
TGAAGTATAATATCTTCCAGAGCTGTCAAAGCCATGCATGGTTCGGTATA
CGGGCGGGTCAAGACCAGTCCACGTTTCTTTTGTCTCGACACATTCGGTG
AGATGAGGTGGTAAGAATGCTTGCCGTGGGTAAGCCAACATTCCTATTTT
GATATTTGAGGATTATTTTAGCTCGTTTGCATTTTTA Run BLAST on NCBI transcript from alignment at scaffold_77:193344..195030- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072415 ID=TCONS_00072415|Name=TCONS_00072415|organism=Clytia hemisphaerica|type=transcript|length=1687bp|location=Sequence derived from alignment at scaffold_77:193344..195030- (Clytia hemisphaerica)
TAAATCCACTCCACTTTTTGATCTTACTGGTATTTACACTATGTAGTTTG
ATTGAACAGGTTTTTTTCGTTTTTTTTTATTGAAGAGTAATCATTTAAAT
CAGTTTAATCAATCAAAATCAAGTTAAAATGGTAAAAGATAAAGGCCACT
TTGATGTTGAAAATGCAAAATTATGTCCCTTATAACACCGGCTCTCAATC
CACTGCGACCAAAAAACAACGCTAATATCAGCCAGCGTAAAAAGGGCTGA
TAAAGTATCAAAGTTATTGTTGGGGATTGGTATAATAAGTAGCTTTCATA
TCCCATAGTTCAGGAGATCCCAAGATACTCTCTGAGACATTTCGGTAGAT
TATCATTCAGAAAGTTGTCACTGAAACTTCTCAAGCAAGCCATTCGTGCC
ATATGTTTCAAGGAGATTTTCAAATGATTATATGGCGGAGTCACTTTCGC
AAATTGTAGCACATATTTTGCATTTTGGAAAGCTATCTCCTGCATGTGTA
AATTGAATGAAAAGTCACCAGTCCAACTCTTGAAATCATAAATTATACTT
TGTTCTCCCGATCCAAAATCATACAAATAAATTGACATAGAGCAATTGTG
TCCTTCTGGAGGGACTTGAAGGCCAATGACGAAGTACTGGTCAAAACATT
CCACAACTTTGTTGAAAAAGATATGTTTTCCTTGGTAAAGCAAATTGATT
CTTTTCAATGGGATAACCTCATTTTTGCTGTTGACTTGAAAGAATTTTAA
GCTTTTTACCCTCGTTTTGATATCGCTCAAGTGCATAAAGAACACAGATT
TTGACAAATGGTACAACATTTGATCCTCGAAAGTCTCTTTTTCATCATCA
ATAGTCACTCGTTCAGCCAGAACTTGATTTCCTGAAAAATCGAAACCAGA
TATAAACGGACCATAACCATAGTCGTGGATAAAAATTCTCTCCGAACTAA
TATCTAGGGACAGCTCGAGATCTATATAGGATGTGTCGAATGGACCGGGT
TCGAAACCAAGCTCAGTGCAATTACTCAGCACAACACGCTTGAAATGTGA
TAGCTTTGTCTTTTCCATTAAGACAATATCAGCCACAAAATTAAAATCAC
CGGTAGAAACAAGCAACATTAAGACGTAACCATATTCTTTGGTTTTTCCC
TGCCAAAAACATTGGATGCATTGCAAAGCTTTATATGGCTCCAGTTCAAT
TACACAATCCTCCGTTTCTTGAAAAGTGGTCGATACAATACTTCCTGGAG
GAGCCCCTAAAAGGTGTTTCAAGCTTCCACTGTGTAATATTAAAGGTTGG
CTCCCATCTTCCAAAGTCGAAGACTTCTCCAATATTAACCAACGATTAAG
TGAAGCGTTATAGGGCCAATCATATTCCAAAAAATTAGATTCGTTCCACG
TTGGTAATTTAATCAAACTCGTTTGTAATTTAGCTGTTTCCTCATTGAAT
GAATAAACAGTGATGACATGATCATCTGTGCTGTCCCGTTGCCTGGTATA
TGAAGTATAATATCTTCCAGAGCTGTCAAAGCCATGCATGGTTCGGTATA
CGGGCGGGTCAAGACCAGTCCACGTTTCTTTTGTCTCGACACATTCGGTG
AGATGAGGTGGTAAGAATGCTTGCCGTGGGTAAGCCAACATTCCTATTTT
GATATTTGAGGATTATTTTAGCTCGTTTGCATTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072415-exon-scaffold_77-1575043694:193344..195030 | TCONS_00072415-exon-scaffold_77-1575043694:193344..195030 | Clytia hemisphaerica | exon |
| TCONS_00072415-exon-scaffold_77-1510915933:193344..195030 | TCONS_00072415-exon-scaffold_77-1510915933:193344..195030 | Clytia hemisphaerica | exon |
| TCONS_00072415-exon-scaffold_77-1491911889:193344..195030 | TCONS_00072415-exon-scaffold_77-1491911889:193344..195030 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_77 | supercontig | scaffold_77:193344..195030 - |
Blast
The following BLAST results are available for this feature:
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