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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072291 ID=TCONS_00072291|Name=TCONS_00072291|organism=Clytia hemisphaerica|type=transcript|length=834bp
GCACGTCTTTGTTGGTCTGGTCAAACTTGTGATCGTCACATACCAGTACA
TGTTTCTTCGTGATTTCGGAGTTGTGAGCCGGATTCTTGCAAATAAAGTC
TCGTTGACATTTTCCTTCGGCGTGTTTGCCTCTCNGTCTGGTCAAACTTG
TGATCGTCACATACCAGTACATGTTTCTTCGTGATTTCGGAGTTGTGAGC
CGGATTCTTGCAGATAAAGTCTCGTTGACATTTTCCTTCGGCGTGTTTGC
CTCTATCCATTTGTGCTCCGGGATAAAGGCATTGATAACAGAGTCCATTG
TCTTGGAGGAACTTGAAACGTTGGCTGGTTGTCATGTCGACAAACTTCTT
GCATGAGAAATACTGAATTAACTTTGTACCTCTCGGACCATTGGATTTGA
TATGATTGGTTGCGCCACAGATGAAGCATATTGGCTCTTGGTGTTGTTGG
TGTTGGGGTTTTCTATCTGACGAGCCATAGTAAGTTGACGAACCAGACTT
CCTCTTGTCTTTCTCCTTGTCATTGGTTGAGTTGGATGTCTTGGTATTCG
ACTGGATGACAGTGACTTGTTGCTGTACCTTGATTTCTTTCTCCAGAAAT
TCAATCATCTGTTTCCATTTGTATTTTCCCTCTCTTGGACTTTCGCAGGT
CAATGTCAGCCATCTCATCATTCGACTTTGACCAAGTTTGTTCGACAGGT
GGGTTAGGGCGTCACCATAGTATAACTCGTTCTCGATGTTGCTGTCGGAT
GCTAGATGCATTAAGTCCCGCATGACGTTGATGACCTTGCTTAACGATTC
AGTGATTTTGATGGAGTCCTTGTGCTTCAAGTCA Run BLAST on NCBI protein sequence of TCONS_00072291-protein >TCONS_00072291-protein ID=TCONS_00072291-protein|Name=TCONS_00072291-protein|organism=Clytia hemisphaerica|type=polypeptide|length=265bp
DLKHKDSIKITESLSKVINVMRDLMHLASDSNIENELYYGDALTHLSNKL
GQSRMMRWLTLTCESPREGKYKWKQMIEFLEKEIKVQQQVTVIQSNTKTS
NSTNDKEKDKRKSGSSTYYGSSDRKPQHQQHQEPICFICGATNHIKSNGP
RGTKLIQYFSCKKFVDMTTSQRFKFLQDNGLCYQCLYPGAQMDRGKHAEG
KCQRDFICKNPAHNSEITKKHVLVCDDHKFDQXERQTRRRKMSTRLYLQE
SGSQLRNHEETCTGM Run BLAST on NCBI transcript from alignment at scaffold_74:1..834 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072291 ID=TCONS_00072291|Name=TCONS_00072291|organism=Clytia hemisphaerica|type=transcript|length=834bp|location=Sequence derived from alignment at scaffold_74:1..834 (Clytia hemisphaerica)
TGACTTGAAGCACAAGGACTCCATCAAAATCACTGAATCGTTAAGCAAGG
TCATCAACGTCATGCGGGACTTAATGCATCTAGCATCCGACAGCAACATC
GAGAACGAGTTATACTATGGTGACGCCCTAACCCACCTGTCGAACAAACT
TGGTCAAAGTCGAATGATGAGATGGCTGACATTGACCTGCGAAAGTCCAA
GAGAGGGAAAATACAAATGGAAACAGATGATTGAATTTCTGGAGAAAGAA
ATCAAGGTACAGCAACAAGTCACTGTCATCCAGTCGAATACCAAGACATC
CAACTCAACCAATGACAAGGAGAAAGACAAGAGGAAGTCTGGTTCGTCAA
CTTACTATGGCTCGTCAGATAGAAAACCCCAACACCAACAACACCAAGAG
CCAATATGCTTCATCTGTGGCGCAACCAATCATATCAAATCCAATGGTCC
GAGAGGTACAAAGTTAATTCAGTATTTCTCATGCAAGAAGTTTGTCGACA
TGACAACCAGCCAACGTTTCAAGTTCCTCCAAGACAATGGACTCTGTTAT
CAATGCCTTTATCCCGGAGCACAAATGGATAGAGGCAAACACGCCGAAGG
AAAATGTCAACGAGACTTTATCTGCAAGAATCCGGCTCACAACTCCGAAA
TCACGAAGAAACATGTACTGGTATGTGACGATCACAAGTTTGACCAGACN
GAGAGGCAAACACGCCGAAGGAAAATGTCAACGAGACTTTATTTGCAAGA
ATCCGGCTCACAACTCCGAAATCACGAAGAAACATGTACTGGTATGTGAC
GATCACAAGTTTGACCAGACCAACAAAGACGTGC Coding sequence (CDS) from alignment at scaffold_74:1..834 >TCONS_00072291 ID=TCONS_00072291|Name=TCONS_00072291|organism=Clytia hemisphaerica|type=CDS|length=798bp|location=Sequence derived from alignment at scaffold_74:1..834 (Clytia hemisphaerica)
GACTTGAAGCACAAGGACTCCATCAAAATCACTGAATCGTTAAGCAAGGT
CATCAACGTCATGCGGGACTTAATGCATCTAGCATCCGACAGCAACATCG
AGAACGAGTTATACTATGGTGACGCCCTAACCCACCTGTCGAACAAACTT
GGTCAAAGTCGAATGATGAGATGGCTGACATTGACCTGCGAAAGTCCAAG
AGAGGGAAAATACAAATGGAAACAGATGATTGAATTTCTGGAGAAAGAAA
TCAAGGTACAGCAACAAGTCACTGTCATCCAGTCGAATACCAAGACATCC
AACTCAACCAATGACAAGGAGAAAGACAAGAGGAAGTCTGGTTCGTCAAC
TTACTATGGCTCGTCAGATAGAAAACCCCAACACCAACAACACCAAGAGC
CAATATGCTTCATCTGTGGCGCAACCAATCATATCAAATCCAATGGTCCG
AGAGGTACAAAGTTAATTCAGTATTTCTCATGCAAGAAGTTTGTCGACAT
GACAACCAGCCAACGTTTCAAGTTCCTCCAAGACAATGGACTCTGTTATC
AATGCCTTTATCCCGGAGCACAAATGGATAGAGGCAAACACGCCGAAGGA
AAATGTCAACGAGACTTTATCTGCAAGAATCCGGCTCACAACTCCGAAAT
CACGAAGAAACATGTACTGGTATGTGACGATCACAAGTTTGACCAGACNG
AGAGGCAAACACGCCGAAGGAAAATGTCAACGAGACTTTATTTGCAAGAA
TCCGGCTCACAACTCCGAAATCACGAAGAAACATGTACTGGTATGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072291-exon-scaffold_74-1491911889:1..834 | TCONS_00072291-exon-scaffold_74-1491911889:1..834 | Clytia hemisphaerica | exon |
| TCONS_00072291-exon-scaffold_74-1510915933:1..834 | TCONS_00072291-exon-scaffold_74-1510915933:1..834 | Clytia hemisphaerica | exon |
| TCONS_00072291-exon-scaffold_74-1575043694:1..834 | TCONS_00072291-exon-scaffold_74-1575043694:1..834 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_74 | supercontig | scaffold_74:1..834 . |
Blast
The following BLAST results are available for this feature:
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