Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072206 ID=TCONS_00072206|Name=TCONS_00072206|organism=Clytia hemisphaerica|type=transcript|length=1057bpRun BLAST on NCBI transcript from alignment at scaffold_71:1046583..1062865- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00072206 ID=TCONS_00072206|Name=TCONS_00072206|organism=Clytia hemisphaerica|type=transcript|length=16283bp|location=Sequence derived from alignment at scaffold_71:1046583..1062865- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00072206 vs. Swiss-Prot (Human)
Match: KAT3 (Kynurenine--oxoglutarate transaminase 3 OS=Homo sapiens GN=KYAT3 PE=1 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 5.703e-103 Identity = 163/334 (48.80%), Postives = 223/334 (66.77%), Query Frame = 3 Query: 3 YSPLMGRTIDPMSEILVTVGAYESLHCAVHAVTNPGDEVILIEPYFDSYGETVRVIGATARNVPXXXX---XXXXXXXDFVLDKEELRNAFNEKTKCIIVNTPHNPTGKMFDQEEIEFIADLCKKHNVLYISDEVYEWLHYE-NKHVRVASLPGMWERTITICSAGKTFNATGFKTGWALGPKYLISAAMGIHQGIIYTVPTPLQIALAETIKEERALIGTDESYWKFLNETMTKKREEMFQLATEAGLNPIKPDGGYFMVMDLSNLDFE-PPVESKDVYDQRFCEWLVKEKGIAAIPISAFFSKNHKEEFQRFVRFCFIKGDSTMQQAAEKLR 989 Y L + ID EILVTVGAY SL + A+ + GDEVILI P++D Y VR+ GAT +PL+ K SS D+ LD +EL + FN KTK II+NTPHNP GK++++EE++ IADLC K++ L ISDEVYEWL Y NKH+++A+ PGMWERTITI SAGKTF+ TG+K GW++GP +LI + Q IYT TPLQ ALA+ + + E Y+ L + + KR+ M +L GL PI PDGGYF++ D+S LD + +++ + YD +F +W+ K K ++AIP+SAF + K +F++FVRFCFIK DST+ A E ++ Sbjct: 114 YEKLYQKQIDSNKEILVTVGAYGSLFNTIQALIDEGDEVILIVPFYDCYEPMVRMAGATPVFIPLRSKPVYGKRWSSSDWTLDPQELESKFNSKTKAIILNTPHNPLGKVYNREELQVIADLCIKYDTLCISDEVYEWLVYSGNKHLKIATFPGMWERTITIGSAGKTFSVTGWKLGWSIGPNHLIKHLQTVQQNTIYTCATPLQEALAQAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLESVGLKPIVPDGGYFIIADVSLLDPDLSDMKNNEPYDYKFVKWMTKHKKLSAIPVSAFCNSETKSQFEKFVRFCFIKKDSTLDAAEEIIK 447 The following BLAST results are available for this feature:
BLAST of TCONS_00072206 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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