TCONS_00072036 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072036
Unique NameTCONS_00072036
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length104

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072036 ID=TCONS_00072036|Name=TCONS_00072036|organism=Clytia hemisphaerica|type=transcript|length=104bp
TGTTCTGTACCCAGCATTTCGGAAGGATTTCCTCAGTTTTGGGCTCAGAC
CAGGTATCCAAGGTAATTTAACGATTGGTAGTTGCTCTGGATCATTTCGA
TTGT
Run BLAST on NCBI

transcript from alignment at scaffold_69:1057..1160

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072036 ID=TCONS_00072036|Name=TCONS_00072036|organism=Clytia hemisphaerica|type=transcript|length=104bp|location=Sequence derived from alignment at scaffold_69:1057..1160 (Clytia hemisphaerica)
ACAATCGAAATGATCCAGAGCAACTACCAATCGTTAAATTACCTTGGATA
CCTGGTCTGAGCCCAAAACTGAGGAAATCCTTCCGAAATGCTGGGTACAG
AACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044732XLOC_044732Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072036-exon-scaffold_69-1491911889:1057..1160TCONS_00072036-exon-scaffold_69-1491911889:1057..1160Clytia hemisphaericaexon
TCONS_00072036-exon-scaffold_69-1510915933:1057..1160TCONS_00072036-exon-scaffold_69-1510915933:1057..1160Clytia hemisphaericaexon
TCONS_00072036-exon-scaffold_69-1575043694:1057..1160TCONS_00072036-exon-scaffold_69-1575043694:1057..1160Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_69supercontigscaffold_69:1057..1160 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072036 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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