TCONS_00071648 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071648
Unique NameTCONS_00071648
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1188

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071648 ID=TCONS_00071648|Name=TCONS_00071648|organism=Clytia hemisphaerica|type=transcript|length=1188bp
CCAGTATTGACTTTACTTGTTCAGTCAgttgaaaaaaaacgtgtagttta
aAGGGAGGTAAACTATTactaaagaagaagaaaaatccaAGAAGAAAAGG
AGTTTGGTTTGTTTGTTGTTGGCAAAGAGAAAGAGATATAAAGAAGAATT
ATGGATAGTCAAGcaCCACCATACAACCCTGCAGCAGCACCACAGTACCC
ACCCACCTCACAACCCTACCCACCAACGTCTCAGCCTCAATATCCACCAA
CCTCTCAACCCTACTACCCACCCACTTCTCAACCGCAGTACCCACCCACC
TCTCAACCAGGATATGGGTACCCACCACACCAGCAACCACCACCCAGTGG
AAAATACCCTGAACCACCACCAGGGTATACCGCTCAACAACCCATGCCCC
AACAACATTATCAACAGAATAGTATGACCACCAATTCAACCACTGTCATC
ATGGCTGGCGGTATGGCTCCACAACCGCAAATTGTGCACCAAGCGGCACC
ACCAAATTACATGGCTTTATCATGGATTGTCTGTTTATTCTGTTGTTGGC
CAATTGGTATCGCTGCCATTATGGCTTCCTCGAGGGTTGATTCGGCCGTA
GCAGTTGGCAACTATGCTGAAGCACAAAGTCAATCATCACGAGCAAAGGG
TCTGGGAATAGCTGGTCTGGTCTGTGGAATTATCATTATTGTTATCATTG
TGATACGTTTCACTGTTATCGTGAATTCGTCTTCTTCGAGCTACTATAGC
AAATAATGTGGACGATACTTGGTGTTTTTATGGAGTATATAAAAATCATT
TATAGTTTATTAATGATATATACATTAGAGCATAATAGAGCATCTTTGAA
TTTCTCTGTAATTAAAGAGAGAACTTTAAATTTCTCTATCCTCGTTTTCA
ATCGAAAGCGTCAAAGTggtttcaatttaattttaatcgTATTCGTCATT
TTTCCTGTCACTTTTCTTAAAGAATTACAGACTGTAAGTATAATTTGTTC
CATTTTTGTTTCGATATAatcaaggataatttttttaaccaTAAAAATCT
GCTACTATTTTAGCTGCTTATAAAAGTGGATTTCacttgtaaatatttta
aacacTTAATTTTTGGGATAATTTTAAGTATTAAGGATTTGctttttgtt
gttattttttctgaaagaaacatcttacaaaagaaaaa
Run BLAST on NCBI

protein sequence of TCONS_00071648-protein

>TCONS_00071648-protein ID=TCONS_00071648-protein|Name=TCONS_00071648-protein|organism=Clytia hemisphaerica|type=polypeptide|length=201bp
MDSQAPPYNPAAAPQYPPTSQPYPPTSQPQYPPTSQPYYPPTSQPQYPPT
SQPGYGYPPHQQPPPSGKYPEPPPGYTAQQPMPQQHYQQNSMTTNSTTVI
MAGGMAPQPQIVHQAAPPNYMALSWIVCLFCCWPIGIAAIMASSRVDSAV
AVGNYAEAQSQSSRAKGLGIAGLVCGIIIIVIIVIRFTVIVNSSSSSYYS
K
Run BLAST on NCBI

transcript from alignment at scaffold_63:396013..402770+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071648 ID=TCONS_00071648|Name=TCONS_00071648|organism=Clytia hemisphaerica|type=transcript|length=6758bp|location=Sequence derived from alignment at scaffold_63:396013..402770+ (Clytia hemisphaerica)
CCAGTATTGACTTTACTTGTTCAGTCAgttgaaaaaaaacgtgtagttta aAGGGAGGTAGGTTTCACTTTTACAACGTCGTTAGTCCGTGATTTATATT TTTCGACTGAGATTTCGTAAAATTCAAAACGGTcgaattttttaaacaaa aatcttttttgagaaatatttcttgaaaatttgatgCTTAGAAGTGTTTT TATTGAACTATTTTTGTGCATACATTTTCAGGTAAACTATTactaaagaa gaagaaaaatccaAGAAGAAAAGGAGTTTGGTTTGTTTGTTGTTGGCAAA GAGAAAGAGATATAAAGAAGAATTATGGATAGTCAAGGTGAATGTTTAAA TACTTAATTAacgaacacccctgtctcaataaaccgGTGATTTTTTTAGT GGGGTGGAATGTTAAAGTTTGAtaccagtggggataaaagaTTGCTTGTT ATAACATCTCTCTGTTTTAACGTTTTAACGTCGTgtgatttcaaattatg taGTTTAACATAAGCTCGTAAATTCAGACAGGGTTTTAAGAATTAACGAA AAGTAACACCAATGGGACAAATACAGCTGAGTCTCCATAATCTTCATAAT CTTCATAATCTGTCTGGAGAGTTTTACAAAGCCCGGCCTGACGACGAAAG CTTTCCCTgcccactgagaaattgactttgatttcatccccattatgtag aaattcattgtttagaGATTGCATCCCAAAACCATCAccattggattttt taaccttggcacaatttttatccccattgagatttcaatcaaaattttta tccctGCTGTATATAAGCAAaggtttcaccggggctgtgagacaggggtg taagaacccagctgacacacaacgttgtttttcgacgtttatctaacgtt cacaacatccatataacgttagatgaacgttgaaacaacgttgtgtgcca gctgggaatgaTTTACATAGTCAACTTtccctaattcgaacctctactaa tcgaatctttctataatttgaactaaaatcaataaaaaagacaaattttt ttttgtcacaaGACTCTGAGTTTCATGTTTCTACATCTACAATCATCAGT TGTGAAAATAgtggattgaaaaatttcataataaaCTGATCAAATTAAGT TATTGAAATGGTCGTAAAAAGTTAATGCCTATGTGAACTAAAATATTTGT CCCTCAAGCTagaaattagtataaaatactttctgtatttcgaatctttc tttaattcgaagaaaattcttggtccctttgaagatcgaattagagagag tcaactgggAAAGTCTTTGGTAAACCTCAAGATGACTGGCAACAATCAAA ATAATTGATCGTTTTTAGAACTAATAATAATTGTTTTGCGTGGGCTAGGG AGGATTTTTTTCGTTATGTTTTACATTTCCTTGTTGctcaaattttataa gaagGACTTCTAGTATAAAAACATTCAgaaatctaaaataaaattgcatt taggcgagaccaatttgattagttgttttacgggcccgaccgaccctgaa attccacaaatcgaattaaaaaaaaaattattttggtagCACATTCATAG TGGGCACCCCCCTCCctttaaaaagggggggtttgagaattttactgaat ttaagaGAAGGGGgggcttgtgaaaatttcaaataaaagagggtggcttg gacaaaaagaggggggttaattttttaagggggggggggggggggaagaa agggggggggggggggggaagaaagggggggggggggggggcttggaaga tttggcaatttgcaaaagagtgtttcccattcatttttaaatttctaatc aattattatatttccattcatttgaatgaaacaaaaactcTGTTTGAGCG TAAAAGGTCgaaaaaaagagggggttgAACTTAAACCTGGGAAAAGAGGG GGGTTGAATAAAAAGAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGG TTGAACTTAAACCTGGgaaaaagaggggggttgaggaattttcattttta agaggggggttgagctaaaagagggggtgccatttttaagggggggggct tgatacccctctgcccactatgacattttcattactttacagactgccaa attttcaaaattttgaaagttttgagaattttacgttcgatgtttcattt tatccatcAATTCgatctttttgtttctttttatcatctatttcgcattt ttgttcagttgtagtagtttttgctgcctttttaggagattttataggtg aaattctacttttatttttattttttcgccgaccgaccgaccctctttct tgagtagcttggcccgtaaaacaacaaattaaatttgccTCGCTTTAGAG CTCTccttacatttttttgtttactgggTGATCGAGTTTATGTTCATTAA TTGTGGCTTTTGATAATCAGAATTTGGATATAATGAGTAGTTCATTATAC GAAAGATTAAAAATTCGAACATAATGAGATGTAAAGAATATTGTCAATAT AGTTCATTAGTGCTATTTTGTTTCGTGAATGGCACAGCAAGAGATTTAGC TGACTCAAAACCAATTTCAAAGCTGCTGGTCTTACATACATGTCAACATC TTTGACGTGTTTTAAGCACCACGAAGTTTCTACATTGACCTTTTCCTAAC CAACCTTGAAAATTGTTTGTATTTTTTCCTGCTACAAATATTCTATAAAA ACGTTATTAGCTTATTTTAACTTATCATTATCAAGTCAATAAAATATACA ACAAGCAGCCGGGCACTCAAGATAAGCGACCTCTCATAGGCCCTTAAGGG TCCGTTTTCGAAAGTGCTCTTCATCAAGGGTTGAAACgagagaagaaaaa taaaaaaaaatttggcaaatctgacaatttttagcttaaaataaATAATA CAAGAAATCGCACCTTTTTTCGCTTAAACTTACTCAAGTgttgttaaact ttttcagCACTTTAAACAAATCACACATACGCTAAGTTTTCAGATCGCGT GAGGGAGCAAACGTTGCCTTAGTAATATGTCTCTTATAGAACGATTTGCT TGCAAGCATCAACACATTAGTCTTGACAGAAAGGATGTTATAAATGACTT GCTAACACCAATTTTGGTAGAATTTTAAATGCAAAGTAATCACCTCTGTA ACGTTAATTGAAATTAATTAAAGGCGTTTTCTTTGTAAACAAACTCTCGC TTAtttgaacttctattattcgaatctttctatactataattcgaactta ttcccaGTCCCTGTCAAGGTGAAACCCatttaaaatactttctgtaattt gaatctctctgtaaATCGATGAAATAAGATCCCCCGCCCGAGTTCGAATT CGccagagtcaactgtatttcgTACATTCTGCTACAGTGTGTCCGGAAAA TCGACAGAgaatttatcaataaaaattcaTAATAATTGTGCTACTTTTTA TGATGTAATCATTCTATTTGTACCATTTTTTATAAACTAAGTAGGAACTG GAATTTCACAGAGGCCCAGAAGGGGGGGGATTATTTGGGCAAAAAGGGAT ACGGagatgtgccgctggtcagtGTACCATTTTCATctccatgagtccca ggtagggtcacaAAAACGCCAAAATAGAAAAAGCAGCCCGTCGCAGGCTg cctttttaggaaaatttgcGAAATAGAGTAAATCTTTGAGAAAactttgg aatttcagtcccagtcagttttttgcaaattttggaaaaacttttcCCAA AAAACGAGTCCCAAGTTGGTTACCATTTTTTTTACCCCTGggaattctat tgaataaatttaattttttttaatttacagtaatatatttctcaggtcta tcgacctctatgaaataatcatgcttaacattttacaattttacagttgT AGGCGCACGGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNTCTAACCTTATATATCCAGTTGCCATCC TTTTGTAATTCTGTTTTCTCCTTTGCCTTCCTATGCCACTCTTTGATGGT TTCGCGTTCTTTCttcgaaaaataaagaagtattttttccatgaaattaT GAAGATTTTACCTTAGGCAAGATCTTTTCCCTCAAAACCCCGTCAGCCCA CACTGAACCATTCActaaaaaacattattttcttttttagcaCCACCATA CAACCCTGCAGCAGCACCACAGTACCCACCCACCTCACAACCCTACCCAC CAACGTCTCAGCCTCAATATCCACCAACCTCTCAACCCTACTACCCACCC ACTTCTCAACCGCAGTACCCACCCACCTCTCAACCAGGATATGGGTACCC ACCACACCAGCAACCACCACCCAGTGGAAAATACCCTGAACCACCACCAG GGTATACCGCTCAACAACCCATGCCCCAACAACATGTAAGTAGAaacttt tttaccattttctgtTGTGTAGTGCTCTCTAGCACTTCagtgcttcattt ttctttttcctagggCTAGATAGTAAGTTAGAATGGATTAAAGCCAGAGT AAGGATCTGTTTGATATCAAACCATCACAATATTCATTTTTGTAACTTTC ACCTGCAATCAGGCATGTGACATGAAAGTTAGCCGTTTACCTCACTAAGA ATCCAATATAAAATGTTAAACGTTGTGTGCCCAAGCCTGTGGTTTTTCTC TAGTTTAAAATTTAATAATCTTTTTTCTCTCTAGTATCAACAGAATAGTA TGACCACCAATTCAACCACTGTCATCATGGCTGGCGGTATGGCTCCACAA CCGCAAATTGTGCACCAAGCGGCACCACCAAATTACATGGCTTTATCATG GATTGTCTGTTTATTCTGTTGTTGGCCAATTGGTATCGCTGCCATTATGG CTTCCTCGAGGGTAAGTTAATTGATGAAAACTAATAAAAGCCTACCTTAt ttgaactaattttcgcgggttttaattttagcgtttttcgcggtttttcg tcaaaatcgcgaaaatttgatcccgcgaaaaattttgagagttgaaaacc gcgaaaattaattcccgcgaaatacaattttttctaattttatcgaaaaa tttgaaaaatccctaggaaaattaaagaaatttgtccaaaaaagggcaaa gccgcgaaaattaaaacccgcgaaaattccagaatggaaaaaaccgcgaa aattaaaacccgcgaaaattccagaatggaaaaaaccgcgaaaattaaaa cccgcgaaaattccagaatggaaaaaaccgcgaaaattaaaacccgcgaa atgcaatttttcggattatttttttcgaccgcgaaaattagttccaataa ggtagctCTGAGGATGGAAAGCTTTTTGCTAAAccctatgtaaaaaataa aatatatatgtAAACTTGACCAATGATGGCTTCAAAAAGTACGTCACAAT TTTATTCCCGGTCACGGAAAATCATGCAATGTACTTATTAAGCTAATGAA ATGCATTATGGGTTGACTCACTAAATTATTTCATCCACTAAGCAGACGCA ATTAATCCTTAATGAGTTAAACCATGGTTCTTTATTTTCTGACGTTATGT CACTGGCAAAAATTAGGATCCCAAAGTTAAGATCTTTAAAACGTCAAACG ATGGGTGTTGTAACAGGGATGGTAAATTACACCATCACATGTCTCACAGA TCGAAAATTctatatgttttttatttattttgaatttcaaataggGATGG AAATACTGCTAAtagggctgaaattgtagggtatttgtCTCACCGAGAAC GGAATTTCtgctaatttttccagtgggtgcGCACCCCTGCGACACATGAG TGTCAAATTGAAATTGcttcaaaacatcaaaacattacTTCTGTTGTTTT TACAGGTTGATTCGGCCGTAGCAGTTGGCAACTATGCTGAAGCACAAAGT CAATCATCACGAGCAAAGGGTCTGGGAATAGCTGGTCTGGTCTGTGGAAT TATCATTATTGTTATCATTGTGATACGTTTCACTGTTATCGTGAATTCGT CTTCTTCGAGCTACTATAGCAAATAATGTGGACGATACTTGGTGTTTTTA TGGAGTATATAAAAATCATTTATAGTTTATTAATGATATATACATTAGAG CATAATAGAGCATCTTTGAATTTCTCTGTAATTAAAGAGAGAACTTTAAA TTTCTCTATCCTCGTTTTCAATCGAAAGCGTCAAAGTggtttcaatttaa ttttaatcgTATTCGTCATTTTTCCTGTCACTTTTCTTAAAGAATTACAG ACTGTAAGTATAATTTGTTCCATTTTTGTTTCGATATAatcaaggataat ttttttaaccaTAAAAATCTGCTACTATTTTAGCTGCTTATAAAAGTGGA TTTCacttgtaaatattttaaacacTTAATTTTTGGGATAATTTTAAGTA TTAAGGATTTGctttttgttgttattttttctgaaagaaacatcttacaa aagaaaaa

Coding sequence (CDS) from alignment at scaffold_63:396013..402770+

>TCONS_00071648 ID=TCONS_00071648|Name=TCONS_00071648|organism=Clytia hemisphaerica|type=CDS|length=2424bp|location=Sequence derived from alignment at scaffold_63:396013..402770+ (Clytia hemisphaerica)
ATGGATAGTCAAGcaCCACCATACAACCCTGCAGCAGCACCACAGTACCC
ACCCACCTCACAACCCTACCCACCAACGTCTCAGCCTCAATATCCACCAA
CCTCTCAACCCTACTACCCACCCACTTCTCAACCGCAGTACCCACCCACC
TCTCAACCAGGATATGGGTACCCACCACACCAGCAACCACCACCCAGTGG
AAAATACCCTGAACCACCACCAGGGTATACCGCTCAACAACCCATGCCCC
AACAACATTATCAACAGAATAGTATGACCACCAATTCAACCACTGTCATC
ATGGCTGGCGGTATGGCTCCACAACCGCAAATTGTGCACCAAGCGGCACC
ACCAAATTACATGGCTTTATCATGGATTGTCTGTTTATTCTGTTGTTGGC
CAATTGGTATCGCTGCCATTATGGCTTCCTCGAGGGTTGATTCGGCCGTA
GCAGTTGGCAACTATGCTGAAGCACAAAGTCAATCATCACGAGCAAAGGG
TCTGGGAATAGCTGGTCTGGTCTGTGGAATTATCATTATTGTTATCATTG
TGATACGTTTCACTGTTATCGTGAATTCGTCTTCTTCGAGCTACTATAGC
AAATAAATGGATAGTCAAGcaCCACCATACAACCCTGCAGCAGCACCACA
GTACCCACCCACCTCACAACCCTACCCACCAACGTCTCAGCCTCAATATC
CACCAACCTCTCAACCCTACTACCCACCCACTTCTCAACCGCAGTACCCA
CCCACCTCTCAACCAGGATATGGGTACCCACCACACCAGCAACCACCACC
CAGTGGAAAATACCCTGAACCACCACCAGGGTATACCGCTCAACAACCCA
TGCCCCAACAACATTATCAACAGAATAGTATGACCACCAATTCAACCACT
GTCATCATGGCTGGCGGTATGGCTCCACAACCGCAAATTGTGCACCAAGC
GGCACCACCAAATTACATGGCTTTATCATGGATTGTCTGTTTATTCTGTT
GTTGGCCAATTGGTATCGCTGCCATTATGGCTTCCTCGAGGGTTGATTCG
GCCGTAGCAGTTGGCAACTATGCTGAAGCACAAAGTCAATCATCACGAGC
AAAGGGTCTGGGAATAGCTGGTCTGGTCTGTGGAATTATCATTATTGTTA
TCATTGTGATACGTTTCACTGTTATCGTGAATTCGTCTTCTTCGAGCTAC
TATAGCAAATAAATGGATAGTCAAGcaCCACCATACAACCCTGCAGCAGC
ACCACAGTACCCACCCACCTCACAACCCTACCCACCAACGTCTCAGCCTC
AATATCCACCAACCTCTCAACCCTACTACCCACCCACTTCTCAACCGCAG
TACCCACCCACCTCTCAACCAGGATATGGGTACCCACCACACCAGCAACC
ACCACCCAGTGGAAAATACCCTGAACCACCACCAGGGTATACCGCTCAAC
AACCCATGCCCCAACAACATTATCAACAGAATAGTATGACCACCAATTCA
ACCACTGTCATCATGGCTGGCGGTATGGCTCCACAACCGCAAATTGTGCA
CCAAGCGGCACCACCAAATTACATGGCTTTATCATGGATTGTCTGTTTAT
TCTGTTGTTGGCCAATTGGTATCGCTGCCATTATGGCTTCCTCGAGGGTT
GATTCGGCCGTAGCAGTTGGCAACTATGCTGAAGCACAAAGTCAATCATC
ACGAGCAAAGGGTCTGGGAATAGCTGGTCTGGTCTGTGGAATTATCATTA
TTGTTATCATTGTGATACGTTTCACTGTTATCGTGAATTCGTCTTCTTCG
AGCTACTATAGCAAATAAATGGATAGTCAAGcaCCACCATACAACCCTGC
AGCAGCACCACAGTACCCACCCACCTCACAACCCTACCCACCAACGTCTC
AGCCTCAATATCCACCAACCTCTCAACCCTACTACCCACCCACTTCTCAA
CCGCAGTACCCACCCACCTCTCAACCAGGATATGGGTACCCACCACACCA
GCAACCACCACCCAGTGGAAAATACCCTGAACCACCACCAGGGTATACCG
CTCAACAACCCATGCCCCAACAACATTATCAACAGAATAGTATGACCACC
AATTCAACCACTGTCATCATGGCTGGCGGTATGGCTCCACAACCGCAAAT
TGTGCACCAAGCGGCACCACCAAATTACATGGCTTTATCATGGATTGTCT
GTTTATTCTGTTGTTGGCCAATTGGTATCGCTGCCATTATGGCTTCCTCG
AGGGTTGATTCGGCCGTAGCAGTTGGCAACTATGCTGAAGCACAAAGTCA
ATCATCACGAGCAAAGGGTCTGGGAATAGCTGGTCTGGTCTGTGGAATTA
TCATTATTGTTATCATTGTGATACGTTTCACTGTTATCGTGAATTCGTCT
TCTTCGAGCTACTATAGCAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044518XLOC_044518Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071648-exon-scaffold_63-1491911889:396013..396069TCONS_00071648-exon-scaffold_63-1491911889:396013..396069Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1510915933:396013..396069TCONS_00071648-exon-scaffold_63-1510915933:396013..396069Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1575043694:396013..396069TCONS_00071648-exon-scaffold_63-1575043694:396013..396069Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1491911889:396244..396349TCONS_00071648-exon-scaffold_63-1491911889:396244..396349Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1510915933:396244..396349TCONS_00071648-exon-scaffold_63-1510915933:396244..396349Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1575043694:396244..396349TCONS_00071648-exon-scaffold_63-1575043694:396244..396349Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1491911889:400453..400697TCONS_00071648-exon-scaffold_63-1491911889:400453..400697Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1510915933:400453..400697TCONS_00071648-exon-scaffold_63-1510915933:400453..400697Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1575043694:400453..400697TCONS_00071648-exon-scaffold_63-1575043694:400453..400697Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1491911889:400997..401173TCONS_00071648-exon-scaffold_63-1491911889:400997..401173Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1510915933:400997..401173TCONS_00071648-exon-scaffold_63-1510915933:400997..401173Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1575043694:400997..401173TCONS_00071648-exon-scaffold_63-1575043694:400997..401173Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1491911889:402168..402770TCONS_00071648-exon-scaffold_63-1491911889:402168..402770Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1510915933:402168..402770TCONS_00071648-exon-scaffold_63-1510915933:402168..402770Clytia hemisphaericaexon
TCONS_00071648-exon-scaffold_63-1575043694:402168..402770TCONS_00071648-exon-scaffold_63-1575043694:402168..402770Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071648-proteinTCONS_00071648-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:396013..402770 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.108716 0.154363 0.451345 0.160571 3.51883 2.48803 34.7368 48.2379 62.084 125.659 125.067 27.5048 291.497 249.562 151.051 164.279 75.5745 61.7537 170.368 285.882 28.1785 30.9311 43.1646 72.0118 156.969 176.96 331.696 319.641 301.492 253.61
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007593CD225/Dispanin_fam
Vocabulary: Biological Process
TermDefinition
GO:0009607response to biotic stimulus
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071648 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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