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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071573 ID=TCONS_00071573|Name=TCONS_00071573|organism=Clytia hemisphaerica|type=transcript|length=610bp
ACATATTCCTTTTACTTTCGTCCAACAATAATTTTACTTTGATATAGTGA
GATTTTGTGGTCCAAAATCTCAATATTCAGTCAGGCATTATTCACTGTAA
AATAAGCAAAATTTGATTTGTGTCCTATTGAATGTTTTTGACTGTATGAA
TTTGTCTATTAGTCTACTCAAACCTCAATTCACTTATTTTTTGGGATTGA
ATCTCACCTAAATAGCATTTCATAATAACCATTGCATAATCAATTACTAA
TAACCCCCTAGTATCTCCTCTCCCATACTTTTCCACTACATAGAACAAAT
TAGCTGGAATCAATTTTGAATACTTATAGAGCGTATGGCAGTGATCACTC
CATGCTTTCACGTGAAAGGGAAAGGACCGTGAAATGTATGGAACGTAAAT
CGGATGCAATCTCAAGAACAAAACTCCAGAATGAATTGATTGCTGCCGGT
ACAAAGAGACCCCGTTGCAGTGTTGGCCCCACTAGTAGCTACACAATTGA
AGATTTGGATGGGTGTTTGGAGAAGGTTCGGGGATTGAAGAGAAATAATG
AATTGGTTATCTTTGATAAGCTTGCCAGGGAGCACAAACTCAAAAACAAA
AAAGGTTTta Run BLAST on NCBI transcript from alignment at scaffold_62:47589..48470+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071573 ID=TCONS_00071573|Name=TCONS_00071573|organism=Clytia hemisphaerica|type=transcript|length=882bp|location=Sequence derived from alignment at scaffold_62:47589..48470+ (Clytia hemisphaerica)
ACATATTCCTTTTACTTTCGTCCAACAATAATTTTACTTTGATATAGTGA
GATTTTGTGGTCCAAAATCTCAATATTCAGTCAGGCATTATTCACTGTAA
AATAAGCAAAATTTGATTTGTGTCCTATTGAATGTTTTTGACTGTATGAA
TTTGTCTATTAGTCTACTCAAACCTCAATTCACTTATTTTTTGGGATTGA
ATCTCACCTAAATAGCATTTCATAATAACCATTGCATAATCAATTACTAA
TAACCCCCTAGTATCTCCTCTCCCATACTTTTCCACTACATAGAACAAAT
TAGCTGGAATCAATTTTGAATACTTATAGAGCGTATGGCAGTGATCACTC
CATGCTTTCACGTGAAAGGGAAAGGACCGTGAAATGTATGGAACGTAAAT
CGGATGCAATCTCAAGAACAAAACTCCAGAATGAATTGATTGCTGCCGGT
ACAAAGAGACCCCGTTGCAGTGTTGGCCCCACTAGTAGCTACACAATTGA
AGATTTGGATGGGTGTTTGGAGAAGGTTTTTTGCAACTGTTTTCAATCTG
TATTTAAAGTTCTTGAAAATATTGAAGATTCAAAAAAACTGAACTACTTT
TTAGATAACATTATTTTGTATGAAATCTTTATGAAAATGAGTTCAATAAT
TTCTGTTATAATTGCCAACCTTATAATAACCCTTCTAGCTTGGACCAATA
CTTTATTTTGATAAAGTTTTTAACAATCAAATGCAGGTCATTTCTGTTAC
TTGATATTCATTTTTACTGATCAGTCAGCATTTCCTTTACTTTCCAGGTT
CGGGGATTGAAGAGAAATAATGAATTGGTTATCTTTGATAAGCTTGCCAG
GGAGCACAAACTCAAAAACAAAAAAGGTTTta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071573-exon-scaffold_62-1491911889:47589..48113 | TCONS_00071573-exon-scaffold_62-1491911889:47589..48113 | Clytia hemisphaerica | exon |
| TCONS_00071573-exon-scaffold_62-1510915933:47589..48113 | TCONS_00071573-exon-scaffold_62-1510915933:47589..48113 | Clytia hemisphaerica | exon |
| TCONS_00071573-exon-scaffold_62-1575043694:47589..48113 | TCONS_00071573-exon-scaffold_62-1575043694:47589..48113 | Clytia hemisphaerica | exon |
| TCONS_00071573-exon-scaffold_62-1491911889:48386..48470 | TCONS_00071573-exon-scaffold_62-1491911889:48386..48470 | Clytia hemisphaerica | exon |
| TCONS_00071573-exon-scaffold_62-1510915933:48386..48470 | TCONS_00071573-exon-scaffold_62-1510915933:48386..48470 | Clytia hemisphaerica | exon |
| TCONS_00071573-exon-scaffold_62-1575043694:48386..48470 | TCONS_00071573-exon-scaffold_62-1575043694:48386..48470 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_62 | supercontig | scaffold_62:47589..48470 + |
Blast
The following BLAST results are available for this feature:
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