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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070869 ID=TCONS_00070869|Name=TCONS_00070869|organism=Clytia hemisphaerica|type=transcript|length=2887bp
TTTACGAAAGAACTTTGATTGATATATAAGAAAGcaaaagaaacaagaaa
atgTGTGGAATTTGGGCCATCTTTGGTTACGATCATCAAGTTTCGTCAGA
ACTCCATCATGCTCTCCTCATCGCTCACCGAGGACCGGATTTCTTCCGTA
TCGAAAGTCTTCCGAACTTTAAACACTCCTACTTAGCGTTCCATCGACTC
TCCATCATGGATAATTTGACAGGACAACAACCCATGCGTTTGTATTCACT
ACCTCACATCCATCTCACGTACAACGGTGAAATCTATAACTTCAAAGAAC
TCTTCCAAAAATATGGATTCGAACAAACGACATCAATGGATGGTGAGATC
ATTATTCATCTTTACAACAAATTTGGCATGGAGAAAACATTACAATTACT
GGATGGAGTGTTCGCTGTCTCCATCTTCGATTCGGAAAATGGAACTTTCC
ACATTGGAAGAGACACATTTGGGGTGCGTCCGTTATTCACGTTACGTCCG
GATTCCGGTGAGTTAGGAGTTTCATCCGAAGCTAAAGGTTTGATTGGTTT
GAACAAATCGAACGGAAAAGCAAGACCTATCAAGCAACTGAAGCCTGGAA
CCTATGCTACCTTCAACATCTGTAAAGAAACTGGCCTCTCTAAATTAGTA
GAAGAAAAATCTTTCACAGATGTAGACGTTCCACAAGCCTTCGACATCCC
AATCACCCTCACCGATGACGTCAAAGAAAATATCCGTAACCTGTTGACTG
ATGCCGTCCGAAAGCGATTGATGGCCGAACGGAGGATAGGATGTTTGCTC
TCCGGTGGACTTGATTCTAGTCTAGTTGCAGCATTGGTTGTCAAGCTATC
CAGAGAAATGGGCATCAAATACCCCATCCAAACCTTTTCAATCGGTTTCC
CAGGGTCACCTGATGTAATGAAAGCACGAAAAGTGGCCGAAATGTTGCAG
ACAGAGCACCACGAAGTCCTCATCACGCCACAAGAAGCTTTAGATGCTCT
TCCTGATGTAAACTATGCCTTAGAGAGTTATGATATCACCACAAACAGGG
CGTCCACACCCATGTTTTTGTTGGCCAAATACATCCGCAAAAACACAAAC
ACTGTCGTCATTTTCTCCGGCGAAGGATCAGACGAGCTCACTCAAGGTTA
CATCTACTTCCACAAAGCACCAACGCCCGAAGCCGCCCATGAAGATTCCA
AACGCCTCTTACGTGAATTGTACATCTTTGACAACTTGAGAGCGGATCGA
ACCATCTCCGCCCATGGATTGGAGCTACGTGTACCTTTCCTGGACAAAGC
TTTCACCTCATATTACCTCTCCATTGGTAAACAACTCGTCCAGCCAAAAG
ATGGCGTCGAAAAATTCCTCCTTCGCTCGGCGTTTGATGGCCACCTCAAA
GGCCTGCTACCGGATGAGATCTTATGGCGACCCAAAGAAGCATTTAGTGA
TGGAATCTCTCAGAAAACTGATTCATGGTTTTCACACATCCAACGCCATG
CAGCTACACTTTTCACCAAACAACAACTGGAGGAAGCTGCAGAGAAATTC
CCCATCAACCCACCTTTCTCCTTCGAAAGCCTGTATTACCGCACTATGTT
TGAATCCAAGTATCCCGGTCAGTGCCATATATTGCCATACTTTTGGATGC
CCAGATGGCAAGAGGGAGATGTGAAAGACCCCTCGGCTAGAGTGCTAACA
AACTATaaacaataaactaaaaatagaaCGTCGTAAAAACAATTATCTAA
AAGATGATTAGCTAAACAGTTGACCtacataaaaataacaatatacaggc
aaaattcataaaatggacttccaatttaatttattttattgcCGAAAATG
GAGCGAaatttttagaaacaaaatgtcTTAGGGGTTAATTATTGTTCCAA
ATATTCCAATTTTTtaggaattatttttttgtaacaaGTTGTCATTATTT
ATTTATAGACCACTGaattaataacaaaaagaaactaATGTTTACCGCAA
TTGGTTGTCATAATCTTCTGTGGGTGGGGGGGGCGGCGGCCTTGAAATTC
TGCCTGGCGTCAAACATTTCAAGAATTGATTCGAATTTACTTCTTTTTGA
GGCTATATTTGCTATCGTTGTTATACATAAATATCTCTATATGTTTCAAT
TTTACTTTATGTAAAGAGTCAAGCTCTCCATCTgttatttatttacaaaa
aacaaactatGGTCAAATTCAATCCACCCAAATATCAAACACTACAGCTC
AAGAGGTCCGAAAACTTTTTATACAGGAGTCGGGAGTGTAATAAACATTG
TAAGGAATACTGAAAGGTAGCTGGTCAAAATCGGTTAAAAGCAATTTTGT
ATCTGGTTGGGATGGTCATAAAGTATtatttaaaattcataaaaaactga
ttttcaaCTTAGAACCTTGTGCAAATTTGACTTAAAAAGCTAGTCACGAT
CAAGAATATTTGGTTGGTAATGAGAAAGATCGCTGAAAACACAATTTTCC
CTAGAAAAACTTCTTCTAAGAGAGATGTACAAATATGGGTGACTTTTTGT
TACGGACTCTGGAATTTGGCTGATTACGCccttttttggaagaatgtaCG
TTTGGAGATAAAACCTAATTGTTCAGCAACAATATCGTGGTTGTACCACG
CAATTCTATATTGAAGGCATACTCCAACCTTGTCCCAAGGTACAAAGTGG
GGGTGGAAGGCCAAAgacaaaaaacaagaaagtactCATTCTCAGTACTC
TAacggggggggtttcagggggtacccgattccgtaattccgccaatttt
ttctccaatttccgtctcaccgtcttaaattgaaccaaaattccgtcacc
gaaaattcctttgaaattcaaaatttttgtcgaaaat Run BLAST on NCBI protein sequence of TCONS_00070869-protein >TCONS_00070869-protein ID=TCONS_00070869-protein|Name=TCONS_00070869-protein|organism=Clytia hemisphaerica|type=polypeptide|length=554bp
MCGIWAIFGYDHQVSSELHHALLIAHRGPDFFRIESLPNFKHSYLAFHRL
SIMDNLTGQQPMRLYSLPHIHLTYNGEIYNFKELFQKYGFEQTTSMDGEI
IIHLYNKFGMEKTLQLLDGVFAVSIFDSENGTFHIGRDTFGVRPLFTLRP
DSGELGVSSEAKGLIGLNKSNGKARPIKQLKPGTYATFNICKETGLSKLV
EEKSFTDVDVPQAFDIPITLTDDVKENIRNLLTDAVRKRLMAERRIGCLL
SGGLDSSLVAALVVKLSREMGIKYPIQTFSIGFPGSPDVMKARKVAEMLQ
TEHHEVLITPQEALDALPDVNYALESYDITTNRASTPMFLLAKYIRKNTN
TVVIFSGEGSDELTQGYIYFHKAPTPEAAHEDSKRLLRELYIFDNLRADR
TISAHGLELRVPFLDKAFTSYYLSIGKQLVQPKDGVEKFLLRSAFDGHLK
GLLPDEILWRPKEAFSDGISQKTDSWFSHIQRHAATLFTKQQLEEAAEKF
PINPPFSFESLYYRTMFESKYPGQCHILPYFWMPRWQEGDVKDPSARVLT
NYKQ Run BLAST on NCBI transcript from alignment at scaffold_58:1051319..1055260+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070869 ID=TCONS_00070869|Name=TCONS_00070869|organism=Clytia hemisphaerica|type=transcript|length=3942bp|location=Sequence derived from alignment at scaffold_58:1051319..1055260+ (Clytia hemisphaerica)
TTTACGAAAGAACTTTGATTGATATAGTGAGGTTTGTTAATATGGTTTGG
CCTGTTGTGACAAAAATCTCTCATGAAGACATATAAAAGTTAAGACATGT
TCAATTGTGGGGTAGTACCAAAGAACTCTCTTCAGTAGCAGTTCTGGTGC
AGTGCATGAAAAAAGTGTTTCTGGAACAGTAGTCTGTTTGGAAGTAAAAA
GTAGCAAAGTATTGCTACATTGCAAAGAATGTAGTTTCTACAAGTTTATT
GAAAGACGTCAGCAGAGAGCTGCTGTAGCTTTATAGCTAGGCTGGCATCC
TTATACTActtgcggttttgtagaggttttTGATTCAGACTTTGTTATAG
CTGAAGTAGAAGCGCATAGAAATAGCGTTCAGTAGCACGTTTTACATGAT
CGATTTGTTTTCCAAGTACACAATGTTTAAACATCTAAGTGTGAAGATGT
GTTTTCGCTTGAAGATAAAAAGGGGGTCTAAAGTCAAAATAGTCTCGAAT
TTCGTATTTCTTCGATATTTACTTTTGTCTATTTGGAAAGgttctgaaaa
atgaaaagaataaaaTCTGATGAGAAATCAACGTGGTTCTTGTTTCGCGC
TCGTTATATTTGCATGTGTGTGTTTGAAGTAGTTTAAAATGAAGTTCCAC
TTCTGTGATTTATGCAACTCTCAAGGGACCAGGGACTTTCTTTGAGTTtg
agagagattcgaattacagaaagtatcTTATATTATACTTTCTAGTTGAG
GGGACCGATATTCTTATAACAGTTCGAACTATTgtgaaagattcgaataa
cagaggtAAAAAAAATAGAGAGAGTGAACTGTACAAATGTCTTTCAATCA
CATACTAAATTGACTTCTTTCTTCTAATTTCAGTAAGAAAGcaaaagaaa
caagaaaatgTGTGGAATTTGGGCCATCTTTGGTTACGATCATCAAGTTT
CGTCAGAACTCCATCATGCTCTCCTCATCGCTCACCGAGGACCGGATTTC
TTCCGTATCGAAAGTCTTCCGAACTTTAAACACTCCTACTTAGCGTTCCA
TCGACTCTCCATCATGGATAATTTGACAGGACAACAACCCATGCGTTTGT
ATTCACTACCTCACATCCATCTCACGTACAACGGTGAAATCTATAACTTC
AAAGAACTCTTCCAAAAATATGGATTCGAACAAACGACATCgtaagttaa
aaatatttattttgaatttcacCATGTGAAAAGATTTCCCGACATCCTTT
GCAGCCTCAACCATTCAAAACTTCCACAAATGACACAAACTGCAAATTGC
TCTCAAAAACTCTGTCTGTAAGTTTGGGCAGTTCTAGTCAATTTCTTCCA
TAAGAATGATTTAATAAATGAGTTTCCCCTCTCTCATAGAATGGATGGTG
AGATCATTATTCATCTTTACAACAAATTTGGCATGGAGAAAACATTACAA
TTACTGGATGGAGTGTTCGCTGTCTCCATCTTCGATTCGGAAAATGGAAC
TTTCCACATTGGAAGAGACACATTTGGGGTGCGTCCGTTATTCACGTTAC
GTCCGGATTCCGGTGAGTTAGGAGTTTCATCCGAAGCTAAAGGTTTGATT
GGTTTGAACAAATCGAACGGAAAAGCAAGACCTATCAAGCAACTGAAGCC
TGGAACCTATGCTACCTTCAACATCTGTAAAGAAACTGGCCTCTCTAAAT
TAGTAGAAGAAAAATCTTTCACAGATGTAGACGTTCCACAAGCCTTCGAC
ATCCCAATCACCCTCACCGATGACGTCAAAGAAAATATCCGTAACCTGTT
GACTGATGCCGTCCGAAAGCGATTGATGGCCGAACGGAGGATAGGATGTT
TGCTCTCCGGTGGACTTGATTCTAGTCTAGTTGCAGCATTGGTTGTCAAG
CTATCCAGAGAAATGGGCATCAAATACCCCATCCAAACCTTTTCAATCGG
TTTCCCAGGGTCACCTGATGTAATGAAAGCACGAAAAGTGGCCGAAATGT
TGCAGACAGAGCACCACGAAGTCCTCATCACGCCACAAGAAGCTTTAGAT
GCTCTTCCTGATGTAAACTATGCCTTAGAGAGTTATGATATCACCACAAA
CAGGGCGTCCACACCCATGTTTTTGTTGGCCAAATACATCCGCAAAAACA
CAAACACTGTCGTCATTTTCTCCGGCGAAGGATCAGACGAGCTCACTCAA
GGTTACATCTACTTCCACAAAGCACCAACGCCCGAAGCCGCCCATGAAGA
TTCCAAACGCCTCTTACGTGAATTGTACATCTTTGACAACTTGAGAGCGG
ATCGAACCATCTCCGCCCATGGATTGGAGCTACGTGTACCTTTCCTGGAC
AAAGCTTTCACCTCATATTACCTCTCCATTGGTAAACAACTCGTCCAGCC
AAAAGATGGCGTCGAAAAATTCCTCCTTCGCTCGGCGTTTGATGGCCACC
TCAAAGGCCTGCTACCGGATGAGATCTTATGGCGACCCAAAGAAGCATTT
AGTGATGGAATCTCTCAGAAAACTGATTCATGGTTTTCACACATCCAACG
CCATGCAGCTACACTTTTCACCAAACAACAACTGGAGGAAGCTGCAGAGA
AATTCCCCATCAACCCACCTTTCTCCTTCGAAAGCCTGTATTACCGCACT
ATGTTTGAATCCAAGTATCCCGGTCAGTGCCATATATTGCCATACTTTTG
GATGCCCAGATGGCAAGAGGGAGATGTGAAAGACCCCTCGGCTAGAGTGC
TAACAAACTATaaacaataaactaaaaatagaaCGTCGTAAAAACAATTA
TCTAAAAGATGATTAGCTAAACAGTTGACCtacataaaaataacaatata
caggcaaaattcataaaatggacttccaatttaatttattttattgcCGA
AAATGGAGCGAaatttttagaaacaaaatgtcTTAGGGGTTAATTATTGT
TCCAAATATTCCAATTTTTtaggaattatttttttgtaacaaGTTGTCAT
TATTTATTTATAGACCACTGaattaataacaaaaagaaactaATGTTTAC
CGCAATTGGTTGTCATAATCTTCTGTGGGTGGGGGGGGCGGCGGCCTTGA
AATTCTGCCTGGCGTCAAACATTTCAAGAATTGATTCGAATTTACTTCTT
TTTGAGGCTATATTTGCTATCGTTGTTATACATAAATATCTCTATATGTT
TCAATTTTACTTTATGTAAAGAGTCAAGCTCTCCATCTgttatttattta
caaaaaacaaactatGGTCAAATTCAATCCACCCAAATATCAAACACTAC
AGCTCAAGAGGTCCGAAAACTTTTTATACAGGAGTCGGGAGTGTAATAAA
CATTGTAAGGAATACTGAAAGGTAGCTGGTCAAAATCGGTTAAAAGCAAT
TTTGTATCTGGTTGGGATGGTCATAAAGTATtatttaaaattcataaaaa
actgattttcaaCTTAGAACCTTGTGCAAATTTGACTTAAAAAGCTAGTC
ACGATCAAGAATATTTGGTTGGTAATGAGAAAGATCGCTGAAAACACAAT
TTTCCCTAGAAAAACTTCTTCTAAGAGAGATGTACAAATATGGGTGACTT
TTTGTTACGGACTCTGGAATTTGGCTGATTACGCccttttttggaagaat
gtaCGTTTGGAGATAAAACCTAATTGTTCAGCAACAATATCGTGGTTGTA
CCACGCAATTCTATATTGAAGGCATACTCCAACCTTGTCCCAAGGTACAA
AGTGGGGGTGGAAGGCCAAAgacaaaaaacaagaaagtactCATTCTCAG
TACTCTAacggggggggtttcagggggtacccgattccgtaattccgcca
attttttctccaatttccgtctcaccgtcttaaattgaaccaaaattccg
tcaccgaaaattcctttgaaattcaaaatttttgtcgaaaat Coding sequence (CDS) from alignment at scaffold_58:1051319..1055260+ >TCONS_00070869 ID=TCONS_00070869|Name=TCONS_00070869|organism=Clytia hemisphaerica|type=CDS|length=3330bp|location=Sequence derived from alignment at scaffold_58:1051319..1055260+ (Clytia hemisphaerica)
atgTGTGGAATTTGGGCCATCTTTGGTTACGATCATCAAGTTTCGTCAGA
ACTCCATCATGCTCTCCTCATCGCTCACCGAGGACCGGATTTCTTCCGTA
TCGAAAGTCTTCCGAACTTTAAACACTCCTACTTAGCGTTCCATCGACTC
TCCATCATGGATAATTTGACAGGACAACAACCCATGCGTTTGTATTCACT
ACCTCACATCCATCTCACGTACAACGGTGAAATCTATAACTTCAAAGAAC
TCTTCCAAAAATATGGATTCGAACAAACGACATCAATGGATGGTGAGATC
ATTATTCATCTTTACAACAAATTTGGCATGGAGAAAACATTACAATTACT
GGATGGAGTGTTCGCTGTCTCCATCTTCGATTCGGAAAATGGAACTTTCC
ACATTGGAAGAGACACATTTGGGGTGCGTCCGTTATTCACGTTACGTCCG
GATTCCGGTGAGTTAGGAGTTTCATCCGAAGCTAAAGGTTTGATTGGTTT
GAACAAATCGAACGGAAAAGCAAGACCTATCAAGCAACTGAAGCCTGGAA
CCTATGCTACCTTCAACATCTGTAAAGAAACTGGCCTCTCTAAATTAGTA
GAAGAAAAATCTTTCACAGATGTAGACGTTCCACAAGCCTTCGACATCCC
AATCACCCTCACCGATGACGTCAAAGAAAATATCCGTAACCTGTTGACTG
ATGCCGTCCGAAAGCGATTGATGGCCGAACGGAGGATAGGATGTTTGCTC
TCCGGTGGACTTGATTCTAGTCTAGTTGCAGCATTGGTTGTCAAGCTATC
CAGAGAAATGGGCATCAAATACCCCATCCAAACCTTTTCAATCGGTTTCC
CAGGGTCACCTGATGTAATGAAAGCACGAAAAGTGGCCGAAATGTTGCAG
ACAGAGCACCACGAAGTCCTCATCACGCCACAAGAAGCTTTAGATGCTCT
TCCTGATGTAAACTATGCCTTAGAGAGTTATGATATCACCACAAACAGGG
CGTCCACACCCATGTTTTTGTTGGCCAAATACATCCGCAAAAACACAAAC
ACTGTCGTCATTTTCTCCGGCGAAGGATCAGACGAGCTCACTCAAGGTTA
CATCTACTTCCACAAAGCACCAACGCCCGAAGCCGCCCATGAAGATTCCA
AACGCCTCTTACGTGAATTGTACATCTTTGACAACTTGAGAGCGGATCGA
ACCATCTCCGCCCATGGATTGGAGCTACGTGTACCTTTCCTGGACAAAGC
TTTCACCTCATATTACCTCTCCATTGGTAAACAACTCGTCCAGCCAAAAG
ATGGCGTCGAAAAATTCCTCCTTCGCTCGGCGTTTGATGGCCACCTCAAA
GGCCTGCTACCGGATGAGATCTTATGGCGACCCAAAGAAGCATTTAGTGA
TGGAATCTCTCAGAAAACTGATTCATGGTTTTCACACATCCAACGCCATG
CAGCTACACTTTTCACCAAACAACAACTGGAGGAAGCTGCAGAGAAATTC
CCCATCAACCCACCTTTCTCCTTCGAAAGCCTGTATTACCGCACTATGTT
TGAATCCAAGTATCCCGGTCAGTGCCATATATTGCCATACTTTTGGATGC
CCAGATGGCAAGAGGGAGATGTGAAAGACCCCTCGGCTAGAGTGCTAACA
AACTATaaacaataaatgTGTGGAATTTGGGCCATCTTTGGTTACGATCA
TCAAGTTTCGTCAGAACTCCATCATGCTCTCCTCATCGCTCACCGAGGAC
CGGATTTCTTCCGTATCGAAAGTCTTCCGAACTTTAAACACTCCTACTTA
GCGTTCCATCGACTCTCCATCATGGATAATTTGACAGGACAACAACCCAT
GCGTTTGTATTCACTACCTCACATCCATCTCACGTACAACGGTGAAATCT
ATAACTTCAAAGAACTCTTCCAAAAATATGGATTCGAACAAACGACATCA
ATGGATGGTGAGATCATTATTCATCTTTACAACAAATTTGGCATGGAGAA
AACATTACAATTACTGGATGGAGTGTTCGCTGTCTCCATCTTCGATTCGG
AAAATGGAACTTTCCACATTGGAAGAGACACATTTGGGGTGCGTCCGTTA
TTCACGTTACGTCCGGATTCCGGTGAGTTAGGAGTTTCATCCGAAGCTAA
AGGTTTGATTGGTTTGAACAAATCGAACGGAAAAGCAAGACCTATCAAGC
AACTGAAGCCTGGAACCTATGCTACCTTCAACATCTGTAAAGAAACTGGC
CTCTCTAAATTAGTAGAAGAAAAATCTTTCACAGATGTAGACGTTCCACA
AGCCTTCGACATCCCAATCACCCTCACCGATGACGTCAAAGAAAATATCC
GTAACCTGTTGACTGATGCCGTCCGAAAGCGATTGATGGCCGAACGGAGG
ATAGGATGTTTGCTCTCCGGTGGACTTGATTCTAGTCTAGTTGCAGCATT
GGTTGTCAAGCTATCCAGAGAAATGGGCATCAAATACCCCATCCAAACCT
TTTCAATCGGTTTCCCAGGGTCACCTGATGTAATGAAAGCACGAAAAGTG
GCCGAAATGTTGCAGACAGAGCACCACGAAGTCCTCATCACGCCACAAGA
AGCTTTAGATGCTCTTCCTGATGTAAACTATGCCTTAGAGAGTTATGATA
TCACCACAAACAGGGCGTCCACACCCATGTTTTTGTTGGCCAAATACATC
CGCAAAAACACAAACACTGTCGTCATTTTCTCCGGCGAAGGATCAGACGA
GCTCACTCAAGGTTACATCTACTTCCACAAAGCACCAACGCCCGAAGCCG
CCCATGAAGATTCCAAACGCCTCTTACGTGAATTGTACATCTTTGACAAC
TTGAGAGCGGATCGAACCATCTCCGCCCATGGATTGGAGCTACGTGTACC
TTTCCTGGACAAAGCTTTCACCTCATATTACCTCTCCATTGGTAAACAAC
TCGTCCAGCCAAAAGATGGCGTCGAAAAATTCCTCCTTCGCTCGGCGTTT
GATGGCCACCTCAAAGGCCTGCTACCGGATGAGATCTTATGGCGACCCAA
AGAAGCATTTAGTGATGGAATCTCTCAGAAAACTGATTCATGGTTTTCAC
ACATCCAACGCCATGCAGCTACACTTTTCACCAAACAACAACTGGAGGAA
GCTGCAGAGAAATTCCCCATCAACCCACCTTTCTCCTTCGAAAGCCTGTA
TTACCGCACTATGTTTGAATCCAAGTATCCCGGTCAGTGCCATATATTGC
CATACTTTTGGATGCCCAGATGGCAAGAGGGAGATGTGAAAGACCCCTCG
GCTAGAGTGCTAACAAACTATaaacaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070869-exon-scaffold_58-1491911889:1051319..1051344 | TCONS_00070869-exon-scaffold_58-1491911889:1051319..1051344 | Clytia hemisphaerica | exon |
| TCONS_00070869-exon-scaffold_58-1510915933:1051319..1051344 | TCONS_00070869-exon-scaffold_58-1510915933:1051319..1051344 | Clytia hemisphaerica | exon |
| TCONS_00070869-exon-scaffold_58-1575043694:1051319..1051344 | TCONS_00070869-exon-scaffold_58-1575043694:1051319..1051344 | Clytia hemisphaerica | exon |
| TCONS_00070869-exon-scaffold_58-1491911889:1052202..1052509 | TCONS_00070869-exon-scaffold_58-1491911889:1052202..1052509 | Clytia hemisphaerica | exon |
| TCONS_00070869-exon-scaffold_58-1510915933:1052202..1052509 | TCONS_00070869-exon-scaffold_58-1510915933:1052202..1052509 | Clytia hemisphaerica | exon |
| TCONS_00070869-exon-scaffold_58-1575043694:1052202..1052509 | TCONS_00070869-exon-scaffold_58-1575043694:1052202..1052509 | Clytia hemisphaerica | exon |
| TCONS_00070869-exon-scaffold_58-1491911889:1052708..1055260 | TCONS_00070869-exon-scaffold_58-1491911889:1052708..1055260 | Clytia hemisphaerica | exon |
| TCONS_00070869-exon-scaffold_58-1510915933:1052708..1055260 | TCONS_00070869-exon-scaffold_58-1510915933:1052708..1055260 | Clytia hemisphaerica | exon |
| TCONS_00070869-exon-scaffold_58-1575043694:1052708..1055260 | TCONS_00070869-exon-scaffold_58-1575043694:1052708..1055260 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:1051319..1055260 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006529 | asparagine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006529 |
asparagine biosynthetic process |
| molecular_function |
GO:0004066 |
asparagine synthase (glutamine-hydrolyzing) activity |
Blast
BLAST of TCONS_00070869 vs. Swiss-Prot (Human)
Match: ASNS (Asparagine synthetase [glutamine-hydrolyzing] OS=Homo sapiens GN=ASNS PE=1 SV=4) HSP 1 Score: 528.48 bits (1360), Expect = 2.515e-176 Identity = 289/564 (51.24%), Postives = 387/564 (68.62%), Query Frame = 3
Query: 51 MCGIWAIFGYDHQVSSELHHALLIAHRGPDFFRIESLPNFKHSYLAFHRLSIMDNLTGQQPMRLYSLPHIHLTYNGEIYNFKELFQKYGFEQTTSMDGEIIIHLYNKFGMEKTLQLLDGVFAVSIFDSENGTFHIGRDTFGVRPLFTLRPDSGELGVSSEAKGLIGLNKSNGKARPIKQLKPGTYATFNICKETGLS--KLVEEKSFTDVDVPQAFD-----IPITLTDDVKENIRNLLTDAVRKRLMAERRIXXXXXXXXXXXXVAALVVKLSREMGIKYPIQTFSIGFPGSPDVMKARKVAEMLQTEHHEVLITPQEALDALPDVNYALESYDITTNRASTPMFLLAKYIRKNTNTVVIFSGEGSDELTQGYIYFHKAPTPEAAHEDSKRLLRELYIFDNLRADRTISAHGLELRVPFLDKAFTSYYLSIGKQLVQPKDGVEKFLLRSAFDGHLKGLLPDEILWRPKEAFSDGISQKTDSWFSHIQRHAATLFTKQQLEEAAEKFPINPPFSFESLYYRTMFESKYPGQCHILPYFWMPRWQEGDVKDPSARVLTNYKQ*TK 1721
MCGIWA+FG D +S + A+ IAHRGPD FR E++ + + FHRL+++D L G QP+R+ P++ L YNGEIYN K++ Q + FE T +DGEII+HLY+K G+E+T+ +LDGVFA + D+ N +GRDT+GVRPLF + G L V SEAKGL+ L S ++ PG Y ++ ++ ++V+ DV + +D P + VK N+R L +AV+KRLM +RRIGCLLSGGLDSSLVAA ++K +E ++YP+QTF+IG SPD++ ARKVA+ + +EH+EVL +E + AL +V ++LE+YDITT RAS M+L++KYIRKNT++VVIFSGEGSDELTQGYIYFHKAP+PE A E+S+RLLRELY+FD LRADRT +AHGLELRVPFLD F+SYYLS+ ++ PK+G+EK LLR F+ L+P EILWRPKEAFSDGI+ +SWF +Q + + AA+KFP N P + E YYR +FE YPG+ L ++WMP+W + DPSAR LT+YK K
Sbjct: 1 MCGIWALFGSDDCLSVQCLSAMKIAHRGPDAFRFENVNGYTNCCFGFHRLAVVDPLFGMQPIRVKKYPYLWLCYNGEIYNHKKMQQHFEFEYQTKVDGEIILHLYDKGGIEQTICMLDGVFAFVLLDTANKKVFLGRDTYGVRPLFKAMTEDGFLAVCSEAKGLVTLKHSATPFLKVEPFLPGHYEVLDLKPNGKVASVEMVKYHHCRDVPLHALYDNVEKLFPGFEIETVKNNLRILFNNAVKKRLMTDRRIGCLLSGGLDSSLVAATLLKQLKEAQVQYPLQTFAIGMEDSPDLLAARKVADHIGSEHYEVLFNSEEGIQALDEVIFSLETYDITTVRASVGMYLISKYIRKNTDSVVIFSGEGSDELTQGYIYFHKAPSPEKAEEESERLLRELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLPPEMRIPKNGIEKHLLRETFED--SNLIPKEILWRPKEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHYPGRADWLSHYWMPKWI--NATDPSARTLTHYKSAVK 560
The following BLAST results are available for this feature:
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