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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070637 ID=TCONS_00070637|Name=TCONS_00070637|organism=Clytia hemisphaerica|type=transcript|length=1605bp
CTGAGCCCAACTTTAATGCAGAAGTATACACAacagaagaaattctttaa
gcAAGATTTATGTCATTTATTAAGAGGATTACCAAACTCAAAACGTAAAC
AAGTTTTGAAAGAAGTTGCAACAGGAATGATTTGCCAAGGAGTTGCACTA
GATGCCTTCCTTAAGCAACAAAAATGCATTGACAATTATGTTCGTCTCAG
TATCCACCAGCATCATCCTGAAACCGGAAAATTCGCTATCGATCTCTTCA
AAAATAAGTGTAGGTTGTACGGTGGTAGCGCCCAGCTTCGGACACCTTGG
CACAATACGGTACTATTCGATACACAGACCGGTGAattcaaaattgattt
caaagaaGCTAACAGAGAAGCTAGCAAGGTGGAAGACAGTCTAACCAGCA
TGGTTTATTACCGTTCCAAACCTTATTTTTATGTTAAGCTTTACTTGTCT
CGTCCATTGAAAGGTGATTATTTGAATCTGAAGATCTCCATGGTTCGAAA
CTCATGTGGAATGGTAATTGAAGCTTATGAGAGGAGTAAAGTTGGTCCTG
ATATTTTTACACCTGAAACTATTCTTGCTTTAACGCATGAATTTGGTGTT
GTTGTGCTTAGAGGTTTTAATGAGTTTGAAGACGAACAAGACCTTCTACA
TTACTATAGAGATCACATGAAGCAAAGAGTCTTGAACTGGAGTTTTGGTC
CCATCCATAAAGTCAAACCAGACAAAGATATGCCTGGCTATGTTAATAGT
CATGATGGGATACCCGTTCATTGGGATATGGTGGCCCCACCTAAATACAT
GGGCGTTGACCAAGCTATACACAAGTATGAGGATTTCATTTGTCCAGTAT
TTGCGCTTTACTGTCGTAGCACTAACCGTTTGTCGGACTCCGTAGGTGAA
GATGACAGGGAAGGCGCAACGACGTTTATCGATTCAATAGCTGTGGTTCA
ATCACTTCACGGATGCACCATAGAAGATTGGAAAAATACAAAACTCCAGT
ATGAGACTCGACTTCTCAAAACGGACAACCAAGGAAATGAAGTCTATTTT
GGTGGCAAAGATAACTCATATACGTACCCACTTATACATGAATGCCCAAA
CAAAGATGGTGTTGATTCTCTACGGTGGTGGCAGAGCTGGTCAAAAGGAG
AATTCGCAAATGCCAAGCAACATAATCAATTCAATATTCAAGATTCACCC
GACTCGATGAGTGACGTAACCTCACAAGAGCTGGAAGAAGAGATACGTAA
AGCTGCttttgacgaaagatttttcttttggcATCAATACAAACAAGGTG
ATCTAGTTTTTGTCAACAATGAAACGACACTTCACGGTCGTAACGCGTTT
GGAAATTCTGACAGGGAATTATGGAGAATACAATCATTGCCAGATTCTCA
AAACTTGCCAGAGTTTTTTAATCGACAATGAAATAAATCTTGGACTAAAT
TGTATAATTAGCTTCACCAACGATGCAAGTACAATGAAAAAGATTCCAAA
GATTTccatatatttttatttaaagagTATTTAACGTTTTAAGGACTAAC
TTTATGAGTGTATTCAGTAATTttataaaattaatttcagATTTTATTTA
AGCAG Run BLAST on NCBI protein sequence of TCONS_00070637-protein >TCONS_00070637-protein ID=TCONS_00070637-protein|Name=TCONS_00070637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=476bp
LSPTLMQKYTQQKKFFKQDLCHLLRGLPNSKRKQVLKEVATGMICQGVAL
DAFLKQQKCIDNYVRLSIHQHHPETGKFAIDLFKNKCRLYGGSAQLRTPW
HNTVLFDTQTGEFKIDFKEANREASKVEDSLTSMVYYRSKPYFYVKLYLS
RPLKGDYLNLKISMVRNSCGMVIEAYERSKVGPDIFTPETILALTHEFGV
VVLRGFNEFEDEQDLLHYYRDHMKQRVLNWSFGPIHKVKPDKDMPGYVNS
HDGIPVHWDMVAPPKYMGVDQAIHKYEDFICPVFALYCRSTNRLSDSVGE
DDREGATTFIDSIAVVQSLHGCTIEDWKNTKLQYETRLLKTDNQGNEVYF
GGKDNSYTYPLIHECPNKDGVDSLRWWQSWSKGEFANAKQHNQFNIQDSP
DSMSDVTSQELEEEIRKAAFDERFFFWHQYKQGDLVFVNNETTLHGRNAF
GNSDRELWRIQSLPDSQNLPEFFNRQ Run BLAST on NCBI transcript from alignment at scaffold_57:546170..548284+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070637 ID=TCONS_00070637|Name=TCONS_00070637|organism=Clytia hemisphaerica|type=transcript|length=2115bp|location=Sequence derived from alignment at scaffold_57:546170..548284+ (Clytia hemisphaerica)
CTGAGCCCAACTTTAATGCAGAAGTATACACAacagaagaaattctttaa
gcAAGATTTATGTCATTTATTAAGAGGATTACCAAACTCAAAACGTAAAC
AAGTTTTGAAAGAAGTTGCAACAGGAATGATTTGCCAAGGTgattgtctt
tctttttttacacttATTAATTCTTACATTTTACAATATCTTGAAGTCTT
CAATCCTGGGAGTGAGTTTCAGAGGATACCCAATTCCAACATTCCGTCAA
TTGTTTGTACAGTTCCCGTCACACCCTAAGAACGTGAACCGAAATTCCGC
CAacgaaaatttctttgaatgtGAAGTTGTTCTTTTTTCAAAGTATCATT
TTTCTGGTAAAAAGTCATATGTTTTTGCATTATCAGAACCATAATTGTTA
atagtcttttttttttgcagtatGAACATTCCCGAGACAACCTAGTGAGC
TCTTTCTGGTTTTCGCCATTTCCTTAAAGAATATATGAAAGTAGATATCC
CACCAGCGCAGACTTGACTTAAAGAATGGATGTGGGAAAaatgttttctc
aaaatttaacTCGAAAAAAAGCCCTTTTTCTTGTGATTAAAAATGCGCAA
ACAGTAGGTAACGTCTTTATAAatgattttcattaattttcatttgtaGG
AGTTGCACTAGATGCCTTCCTTAAGCAACAAAAATGCATTGACAATTATG
TTCGTCTCAGTATCCACCAGCATCATCCTGAAACCGGAAAATTCGCTATC
GATCTCTTCAAAAATAAGTGTAGGTTGTACGGTGGTAGCGCCCAGCTTCG
GACACCTTGGCACAATACGGTACTATTCGATACACAGACCGGTGAattca
aaattgatttcaaagaaGCTAACAGAGAAGCTAGCAAGGTGGAAGACAGT
CTAACCAGCATGGTTTATTACCGTTCCAAACCTTATTTTTATGTTAAGCT
TTACTTGTCTCGTCCATTGAAAGGTGATTATTTGAATCTGAAGATCTCCA
TGGTTCGAAACTCATGTGGAATGGTAATTGAAGCTTATGAGAGGAGTAAA
GTTGGTCCTGATATTTTTACACCTGAAACTATTCTTGCTTTAACGCATGA
ATTTGGTGTTGTTGTGCTTAGAGGTTTTAATGAGTTTGAAGACGAACAAG
ACCTTCTACATTACTATAGAGATCACATGAAGCAAAGAGTCTTGAACTGG
AGTTTTGGTCCCATCCATAAAGTCAAACCAGACAAAGATATGCCTGGCTA
TGTTAATAGTCATGATGGGATACCCGTTCATTGGGATATGGTGGCCCCAC
CTAAATACATGGGCGTTGACCAAGCTATACACAAGTATGAGGATTTCATT
TGTCCAGTATTTGCGCTTTACTGTCGTAGCACTAACCGTTTGTCGGACTC
CGTAGGTGAAGATGACAGGGAAGGCGCAACGACGTTTATCGATTCAATAG
CTGTGGTTCAATCACTTCACGGATGCACCATAGAAGATTGGAAAAATACA
AAACTCCAGTATGAGACTCGACTTCTCAAAACGGACAACCAAGGAAATGA
AGTCTATTTTGGTGGCAAAGATAACTCATATACGTACCCACTTATACATG
AATGCCCAAACAAAGATGGTGTTGATTCTCTACGGTGGTGGCAGAGCTGG
TCAAAAGGAGAATTCGCAAATGCCAAGCAACATAATCAATTCAATATTCA
AGATTCACCCGACTCGATGAGTGACGTAACCTCACAAGAGCTGGAAGAAG
AGATACGTAAAGCTGCttttgacgaaagatttttcttttggcATCAATAC
AAACAAGGTGATCTAGTTTTTGTCAACAATGAAACGACACTTCACGGTCG
TAACGCGTTTGGAAATTCTGACAGGGAATTATGGAGAATACAATCATTGC
CAGATTCTCAAAACTTGCCAGAGTTTTTTAATCGACAATGAAATAAATCT
TGGACTAAATTGTATAATTAGCTTCACCAACGATGCAAGTACAATGAAAA
AGATTCCAAAGATTTccatatatttttatttaaagagTATTTAACGTTTT
AAGGACTAACTTTATGAGTGTATTCAGTAATTttataaaattaatttcag
ATTTTATTTAAGCAG Coding sequence (CDS) from alignment at scaffold_57:546170..548284+ >TCONS_00070637 ID=TCONS_00070637|Name=TCONS_00070637|organism=Clytia hemisphaerica|type=CDS|length=2862bp|location=Sequence derived from alignment at scaffold_57:546170..548284+ (Clytia hemisphaerica)
CTGAGCCCAACTTTAATGCAGAAGTATACACAacagaagaaattctttaa
gcAAGATTTATGTCATTTATTAAGAGGATTACCAAACTCAAAACGTAAAC
AAGTTTTGAAAGAAGTTGCAACAGGAATGATTTGCCAAGGAGTTGCACTA
GATGCCTTCCTTAAGCAACAAAAATGCATTGACAATTATGTTCGTCTCAG
TATCCACCAGCATCATCCTGAAACCGGAAAATTCGCTATCGATCTCTTCA
AAAATAAGTGTAGGTTGTACGGTGGTAGCGCCCAGCTTCGGACACCTTGG
CACAATACGGTACTATTCGATACACAGACCGGTGAattcaaaattgattt
caaagaaGCTAACAGAGAAGCTAGCAAGGTGGAAGACAGTCTAACCAGCA
TGGTTTATTACCGTTCCAAACCTTATTTTTATGTTAAGCTTTACTTGTCT
CGTCCATTGAAAGGTGATTATTTGAATCTGAAGATCTCCATGGTTCGAAA
CTCATGTGGAATGGTAATTGAAGCTTATGAGAGGAGTAAAGTTGGTCCTG
ATATTTTTACACCTGAAACTATTCTTGCTTTAACGCATGAATTTGGTGTT
GTTGTGCTTAGAGGTTTTAATGAGTTTGAAGACGAACAAGACCTTCTACA
TTACTATAGAGATCACATGAAGCAAAGAGTCTTGAACTGGAGTTTTGGTC
CCATCCATAAAGTCAAACCAGACAAAGATATGCCTGGCTATGTTAATAGT
CATGATGGGATACCCGTTCATTGGGATATGGTGGCCCCACCTAAATACAT
GGGCGTTGACCAAGCTATACACAAGTATGAGGATTTCATTTGTCCAGTAT
TTGCGCTTTACTGTCGTAGCACTAACCGTTTGTCGGACTCCGTAGGTGAA
GATGACAGGGAAGGCGCAACGACGTTTATCGATTCAATAGCTGTGGTTCA
ATCACTTCACGGATGCACCATAGAAGATTGGAAAAATACAAAACTCCAGT
ATGAGACTCGACTTCTCAAAACGGACAACCAAGGAAATGAAGTCTATTTT
GGTGGCAAAGATAACTCATATACGTACCCACTTATACATGAATGCCCAAA
CAAAGATGGTGTTGATTCTCTACGGTGGTGGCAGAGCTGGTCAAAAGGAG
AATTCGCAAATGCCAAGCAACATAATCAATTCAATATTCAAGATTCACCC
GACTCGATGAGTGACGTAACCTCACAAGAGCTGGAAGAAGAGATACGTAA
AGCTGCttttgacgaaagatttttcttttggcATCAATACAAACAAGGTG
ATCTAGTTTTTGTCAACAATGAAACGACACTTCACGGTCGTAACGCGTTT
GGAAATTCTGACAGGGAATTATGGAGAATACAATCATTGCCAGATTCTCA
AAACTTGCCAGAGTTTTTTAATCGACAATGACTGAGCCCAACTTTAATGC
AGAAGTATACACAacagaagaaattctttaagcAAGATTTATGTCATTTA
TTAAGAGGATTACCAAACTCAAAACGTAAACAAGTTTTGAAAGAAGTTGC
AACAGGAATGATTTGCCAAGGAGTTGCACTAGATGCCTTCCTTAAGCAAC
AAAAATGCATTGACAATTATGTTCGTCTCAGTATCCACCAGCATCATCCT
GAAACCGGAAAATTCGCTATCGATCTCTTCAAAAATAAGTGTAGGTTGTA
CGGTGGTAGCGCCCAGCTTCGGACACCTTGGCACAATACGGTACTATTCG
ATACACAGACCGGTGAattcaaaattgatttcaaagaaGCTAACAGAGAA
GCTAGCAAGGTGGAAGACAGTCTAACCAGCATGGTTTATTACCGTTCCAA
ACCTTATTTTTATGTTAAGCTTTACTTGTCTCGTCCATTGAAAGGTGATT
ATTTGAATCTGAAGATCTCCATGGTTCGAAACTCATGTGGAATGGTAATT
GAAGCTTATGAGAGGAGTAAAGTTGGTCCTGATATTTTTACACCTGAAAC
TATTCTTGCTTTAACGCATGAATTTGGTGTTGTTGTGCTTAGAGGTTTTA
ATGAGTTTGAAGACGAACAAGACCTTCTACATTACTATAGAGATCACATG
AAGCAAAGAGTCTTGAACTGGAGTTTTGGTCCCATCCATAAAGTCAAACC
AGACAAAGATATGCCTGGCTATGTTAATAGTCATGATGGGATACCCGTTC
ATTGGGATATGGTGGCCCCACCTAAATACATGGGCGTTGACCAAGCTATA
CACAAGTATGAGGATTTCATTTGTCCAGTATTTGCGCTTTACTGTCGTAG
CACTAACCGTTTGTCGGACTCCGTAGGTGAAGATGACAGGGAAGGCGCAA
CGACGTTTATCGATTCAATAGCTGTGGTTCAATCACTTCACGGATGCACC
ATAGAAGATTGGAAAAATACAAAACTCCAGTATGAGACTCGACTTCTCAA
AACGGACAACCAAGGAAATGAAGTCTATTTTGGTGGCAAAGATAACTCAT
ATACGTACCCACTTATACATGAATGCCCAAACAAAGATGGTGTTGATTCT
CTACGGTGGTGGCAGAGCTGGTCAAAAGGAGAATTCGCAAATGCCAAGCA
ACATAATCAATTCAATATTCAAGATTCACCCGACTCGATGAGTGACGTAA
CCTCACAAGAGCTGGAAGAAGAGATACGTAAAGCTGCttttgacgaaaga
tttttcttttggcATCAATACAAACAAGGTGATCTAGTTTTTGTCAACAA
TGAAACGACACTTCACGGTCGTAACGCGTTTGGAAATTCTGACAGGGAAT
TATGGAGAATACAATCATTGCCAGATTCTCAAAACTTGCCAGAGTTTTTT
AATCGACAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070637-exon-scaffold_57-1491911889:546170..546308 | TCONS_00070637-exon-scaffold_57-1491911889:546170..546308 | Clytia hemisphaerica | exon |
| TCONS_00070637-exon-scaffold_57-1510915933:546170..546308 | TCONS_00070637-exon-scaffold_57-1510915933:546170..546308 | Clytia hemisphaerica | exon |
| TCONS_00070637-exon-scaffold_57-1575043694:546170..546308 | TCONS_00070637-exon-scaffold_57-1575043694:546170..546308 | Clytia hemisphaerica | exon |
| TCONS_00070637-exon-scaffold_57-1491911889:546819..548284 | TCONS_00070637-exon-scaffold_57-1491911889:546819..548284 | Clytia hemisphaerica | exon |
| TCONS_00070637-exon-scaffold_57-1510915933:546819..548284 | TCONS_00070637-exon-scaffold_57-1510915933:546819..548284 | Clytia hemisphaerica | exon |
| TCONS_00070637-exon-scaffold_57-1575043694:546819..548284 | TCONS_00070637-exon-scaffold_57-1575043694:546819..548284 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_57 | supercontig | scaffold_57:546170..548284 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0016491 |
oxidoreductase activity |
Blast
The following BLAST results are available for this feature:
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