Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070609 ID=TCONS_00070609|Name=TCONS_00070609|organism=Clytia hemisphaerica|type=transcript|length=3084bpRun BLAST on NCBI transcript from alignment at scaffold_57:98185..101268+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00070609 ID=TCONS_00070609|Name=TCONS_00070609|organism=Clytia hemisphaerica|type=transcript|length=3084bp|location=Sequence derived from alignment at scaffold_57:98185..101268+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00070609 vs. Swiss-Prot (Human)
Match: ZFP2 (Zinc finger protein 2 homolog OS=Homo sapiens GN=ZFP2 PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.957e-66 Identity = 125/305 (40.98%), Postives = 171/305 (56.07%), Query Frame = 3 Query: 1740 KEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHSGIKPFHCERCDKYFSTEWHLKKHVRIHNGKIKKNYHCEHCDRYFVSGADLKDHKNSHTGNRPYECKACGKSFSRRDAFYTHKQSHNTIECFECKECGKRFTTKRKLTVHGYKHRTDKPFKCTVCGNCYTHNYILTKH 2642 K +KC ECGK +L H+ H G P++C+ CGK F ++L H +IH E Y C ECG FT +L H R+ H G P+EC CGK F + HL VH+R H E + C++C ++F+ S LTLH Q H G K ++CN CGK F++ L H HSG+KPF C C K FS L +H RIH G+ K Y C C ++F + L H+ HTG +PYEC CGK+FS+ H++ H + +EC +CGK F LTVH H +KP++C CG ++ + LT+H Sbjct: 156 KPYKCNECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQHERIHTGEKPYKCNECGKAFTQSMNLTVHQRT-HTGEKPYECNECGKAFSQSMHLIVHQRSHTGEKPYECSQCGKAFSKSSTLTLH-QRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNECGKAFSKNSSLTQHRRIHTGE--KPYECMVCGKHFTGRSSLTVHQVIHTGEKPYECNECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLTVHQRTHTGEKPYQCNECGKAFSRSTNLTRH 456 HSP 2 Score: 206.453 bits (524), Expect = 2.966e-57 Identity = 112/281 (39.86%), Postives = 155/281 (55.16%), Query Frame = 3 Query: 1740 KEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHSGIKPFHCERCDKYFSTEWHLKKHVRIHNGKIKKNYHCEHCDRYFVSGADLKDHKNSHTGNRPYECKACGKSFSRRDAFYTHKQSHNTIECFECKECGKRFTTKRKLTVHGYKH 2570 K ++C+ECGK SL+ HE H G P++C CGK F NL +H + H E Y C ECG F+ LI H RS H G P+EC CGK F K + L +H+R H E + C +C +SF+ + L H Q H G+K F+CN+CGK F++ +L H H+G KP+ C C K+F+ L H IH G+ K Y C C + F A L +H+ HTG +PYEC CGK+F + + H+++H + ++C ECGK F+ LT H H Sbjct: 184 KPYQCKECGKAFHKNSSLIQHERIHTGEKPYKCNECGKAFTQSMNLTVHQRTHTGEKPYECNECGKAFSQSMHLIVHQRS-HTGEKPYECSQCGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEH-QRLHSGVKPFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGE--KPYECNECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLTVHQRTHTGEKPYQCNECGKAFSRSTNLTRHQRTH 460 HSP 3 Score: 201.83 bits (512), Expect = 1.148e-55 Identity = 115/309 (37.22%), Postives = 160/309 (51.78%), Query Frame = 3 Query: 1728 PKMIKEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHSGIKPFHCERCDKYFSTEWHLKKHVRIHNGKIKKNYHCEHCDRYFVSGADLKDHKNSHTGNRPYECKACGKSFSRRDAFYTHKQSHNTIECFECKECGKRFTTKRKLTVHGYKHRTDKPFKCTVCGNCYTHNYILTKH 2642 P + + C G+ L+ + G +EC C K F ++L H +IH E Y C CG F +S L H R H G P++C CGK F + +L VH+R H E + C EC ++F S L H ++ H G K ++CN+CGK F + L +H TH+G KP+ C C K FS HL H R H G+ K Y C C + F + L H+ +HTG +PY+C CGKSFS+ H++ H+ ++ FEC ECGK F+ LT H H +KP++C VCG +T LT H Sbjct: 68 PMVKRPHNCNSHGEDATQNSELIKTQRMFVGKKIYECNQCSKTFSQSSSLLKHQRIHTGEKPYKCNVCGKHFIERSSLTVHQR-IHTGEKPYKCNECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQHERI-HTGEKPYKCNECGKAFTQSMNLTVHQRTHTGEKPYECNECGKAFSQSMHLIVHQRSHTGE--KPYECSQCGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVH 372 HSP 4 Score: 161.384 bits (407), Expect = 7.314e-42 Identity = 89/226 (39.38%), Postives = 122/226 (53.98%), Query Frame = 3 Query: 1740 KEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHSGIKPFHCERCDKYFSTEWHLKKHVRIHNGKIKKNYHCEHCDRYFVSGADLKDHKNSHT 2405 K ++C ECGK L+ H+ +H G P+EC CGK F + L +H + H E Y C +CG F+ + LI+H R H G PFEC CGK F K + L H+RIH E + C C + F +S LT+H QV H G K ++CN+CGK F++ L H H+G KP+ C++C K F L H R H G+ K Y C C + F +L H+ +HT Sbjct: 240 KPYECNECGKAFSQSMHLIVHQRSHTGEKPYECSQCGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQR-LHSGVKPFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVH-QVIHTGEKPYECNECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLTVHQRTHTGE--KPYQCNECGKAFSRSTNLTRHQRTHT 461 HSP 5 Score: 158.303 bits (399), Expect = 8.099e-41 Identity = 85/198 (42.93%), Postives = 112/198 (56.57%), Query Frame = 1 Query: 886 KEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHSGIKPFHCERCDKYFSTEWHLKKHVRIHNGK 1467 K +KC ECGK +L H+ H G P++C+ CGK F ++L H +IH E Y C ECG FT +L H R+ H G P+EC CGK F + HL VH+R H E + C++C ++F+ S LTLH Q H G K ++CN CGK F++ L H HSG+KPF C C K FS L +H RIH G+ Sbjct: 156 KPYKCNECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQHERIHTGEKPYKCNECGKAFTQSMNLTVHQRT-HTGEKPYECNECGKAFSQSMHLIVHQRSHTGEKPYECSQCGKAFSKSSTLTLH-QRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNECGKAFSKNSSLTQHRRIHTGE 351 HSP 6 Score: 153.295 bits (386), Expect = 4.156e-39 Identity = 80/197 (40.61%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 886 KEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHSGIKPFHCERCDKYFSTEWHLKKHVRIHNG 1464 K +KC CGK ++ SL H+ H G P++C CGK F NL +H + H E Y C ECG F S LI+H R H G P++C CGK F + +L VH+R H E + C EC ++F+ L +H Q +H G K ++C+ CGK F++ TL LH H+G KP+ C +C K FS +L +H R+H+G Sbjct: 128 KPYKCNVCGKHFIERSSLTVHQRIHTGEKPYKCNECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQHER-IHTGEKPYKCNECGKAFTQSMNLTVHQRTHTGEKPYECNECGKAFSQSMHLIVH-QRSHTGEKPYECSQCGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSG 322 HSP 7 Score: 150.599 bits (379), Expect = 3.273e-38 Identity = 81/198 (40.91%), Postives = 110/198 (55.56%), Query Frame = 1 Query: 886 KEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHSGIKPFHCERCDKYFSTEWHLKKHVRIHNGK 1467 K ++C+ECGK SL+ HE H G P++C CGK F NL +H + H E Y C ECG F+ LI H RS H G P+EC CGK F K + L +H+R H E + C +C +SF+ + L H Q H G+K F+CN+CGK F++ +L H H+G KP+ C C K+F+ L H IH G+ Sbjct: 184 KPYQCKECGKAFHKNSSLIQHERIHTGEKPYKCNECGKAFTQSMNLTVHQRTHTGEKPYECNECGKAFSQSMHLIVHQRS-HTGEKPYECSQCGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEH-QRLHSGVKPFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGE 379 HSP 8 Score: 149.828 bits (377), Expect = 6.267e-38 Identity = 80/198 (40.40%), Postives = 109/198 (55.05%), Query Frame = 1 Query: 886 KEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHSGIKPFHCERCDKYFSTEWHLKKHVRIHNGK 1467 K ++C ECGK L+ H+ +H G P+EC CGK F + L +H + H E Y C +CG F+ + LI+H R H G PFEC CGK F K + L H+RIH E + C C + F +S LT+H QV H G K ++CN+CGK F++ L H H+G KP+ C++C K F L H R H G+ Sbjct: 240 KPYECNECGKAFSQSMHLIVHQRSHTGEKPYECSQCGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQR-LHSGVKPFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVH-QVIHTGEKPYECNECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLTVHQRTHTGE 435 HSP 9 Score: 143.665 bits (361), Expect = 6.093e-36 Identity = 75/195 (38.46%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 886 KEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRD--EYSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHSGIKPFHCERCDKYFSTEWHLKKHVRIH 1458 K ++C +CGK +L H+ H G P++C CGK F L H ++H + C ECG F+ S L +H R H G P+EC VCGKHF ++ L VH+ IH E + C EC ++F+ + L H Q H G K ++C+ CGK F + +L +H TH+G KP+ C C K FS +L +H R H Sbjct: 268 KPYECSQCGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNECGKAFSKNSSLTQHRR-IHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGEKPYECNECGKAFSQSAYLIEH-QRIHTGEKPYECDQCGKAFIKNSSLTVHQRTHTGEKPYQCNECGKAFSRSTNLTRHQRTH 460 HSP 10 Score: 136.346 bits (342), Expect = 1.313e-33 Identity = 72/168 (42.86%), Postives = 96/168 (57.14%), Query Frame = 1 Query: 886 KEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHS 1377 K +KC +CGK L+ H+ H G+ PFEC CGK F ++L H +IH E Y C+ CG FT +S L H + H G P+EC CGK F + A+L H+RIH E + C +C ++F S LT+H Q TH G K +QCN+CGK F+R L H TH+ Sbjct: 296 KPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVH-QVIHTGEKPYECNECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLTVH-QRTHTGEKPYQCNECGKAFSRSTNLTRHQRTHT 461 HSP 11 Score: 122.479 bits (306), Expect = 4.356e-29 Identity = 72/202 (35.64%), Postives = 100/202 (49.50%), Query Frame = 1 Query: 874 PKMIKEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTHQGIKSFQCNDCGKMFARKFTLQLHAATHSGIKPFHCERCDKYFSTEWHLKKHVRIHNGK 1467 P + + C G+ L+ + G +EC C K F ++L H +IH E Y C CG F +S L H R H G P++C CGK F + +L VH+R H E + C EC ++F S L H ++ H G K ++CN+CGK F + L +H TH+G KP+ C C K FS HL H R H G+ Sbjct: 68 PMVKRPHNCNSHGEDATQNSELIKTQRMFVGKKIYECNQCSKTFSQSSSLLKHQRIHTGEKPYKCNVCGKHFIERSSLTVHQR-IHTGEKPYKCNECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQHERI-HTGEKPYKCNECGKAFTQSMNLTVHQRTHTGEKPYECNECGKAFSQSMHLIVHQRSHTGE 267 HSP 12 Score: 115.931 bits (289), Expect = 4.993e-27 Identity = 73/179 (40.78%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 766 KEVKCIKCITIFESTKLNNEKQKDLLRVNIGVKIPKPKMIKEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTH 1290 K KC KC F + E Q R++ GVK F+C ECGK SL H H G P+EC VCGK F G+++L +H IH E Y C ECG F+ + LI+H R H G P+EC+ CGK F K + L VH+R H E + C EC ++F+ + LT H Q TH Sbjct: 296 KPYKCNKCGKSFSQSTYLIEHQ----RLHSGVK--------PFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGEKPYECNECGKAFSQSAYLIEHQR-IHTGEKPYECDQCGKAFIKNSSLTVHQRTHTGEKPYQCNECGKAFSRSTNLTRH-QRTH 460 HSP 13 Score: 113.235 bits (282), Expect = 4.152e-26 Identity = 73/179 (40.78%), Postives = 94/179 (52.51%), Query Frame = 3 Query: 1620 KEVKCIKCITIFESTKLNNEKQKDLLRVNIGVKIPKPKMIKEFKCQECGKILMDGGSLLAHENAHKGITPFECEVCGKCFPGKNNLRMHLKIHRDE--YSCLECGGIFTSKSDLIKHNRSAHQGTAPFECEVCGKHFPKKAHLRVHKRIHAKE--FNCTECERSFALKSELTLHFQVTH 2144 K KC KC F + E Q R++ GVK F+C ECGK SL H H G P+EC VCGK F G+++L +H IH E Y C ECG F+ + LI+H R H G P+EC+ CGK F K + L VH+R H E + C EC ++F+ + LT H Q TH Sbjct: 296 KPYKCNKCGKSFSQSTYLIEHQ----RLHSGVK--------PFECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGEKPYECNECGKAFSQSAYLIEHQR-IHTGEKPYECDQCGKAFIKNSSLTVHQRTHTGEKPYQCNECGKAFSRSTNLTRH-QRTH 460 The following BLAST results are available for this feature:
BLAST of TCONS_00070609 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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