TCONS_00070388 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070388
Unique NameTCONS_00070388
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4250

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070388 ID=TCONS_00070388|Name=TCONS_00070388|organism=Clytia hemisphaerica|type=transcript|length=4250bp
CGTATACTCCCCTGTATAGTACACGTATACTAAACAGCAAGtcagaaatt
tgaccctgacacccccatGTATAGTACACAAGtactaaacagcaaaaaaa
atttgaaaacacccacccaccccatgatacatgccgcttttttgtacatg
gaccccccccTGGCTATATTGCTAGCTTTATGTCTGGTATAGTTGTGCAA
CGCTGTCCAATGAGTGGAGGGATGCGTTCATCTGGTTTTGAAAAGACACT
GGAGAATTGGTGGTTCCGTACGTCTGCTTTCTTTTTGTCATCAATGTGGA
TGTGACCCTTGTCACAAAGAGGGGCAACACCATCATTATCACACTTACGA
GATTTTATAAAtgtaaaacactttttttaggATTGTTGTTCTCTCCCGGA
TCAACACATTTCACTACATAATTGTTGAATGCTGCTCTACAGGCTTTCGA
TCTGACCACTCAAGAGCAGTTGATTTTACGTAGGATCGGTTTGTTAAGAG
TTTGTATAAGTTGAATATGGAGTGTGGGTATAAGTATctaaaaggtttgt
ttttatttcgtttTATCAAGACATAAAAGGGTGATGCAAGTAGTTGATGA
AATTGCGTACAGTAGGTATAACCCGTATTTTCCCAATAAATTCGATATTC
CAACTGTAAAAAaggaaaacactttttttgaacAGACACATCGGATGGAA
AGAACTGATTTGAAAGCTCAGGTTTGCTGACTTAATATGAAATATACTTC
ACTtgtcttattttcttttttaaattgtttgtGAATGTGACATGTGTCTG
GTGTTTGGCTTTCACATACAGTCTCTTTCATCCAACCTACTTTGTGCATT
GTGGGAAGACAAGAATAGAATTTGATATAATAAAGGTATTTTATTCTTAG
GTGACTATTTACtaagttatttaaaaagaaatgggACAAGATCAAAGTAC
TGTTGATGGTGCTCAAAGACGAGATCCACGGCAACGCTCAGAATCGTCAG
CAAAAAAAGTCAATCAGATTGTTGTTGTGGCAAATAAAACAGAAACAAAG
AAGAAAGATGTTGACGAAGATATGAAAAATCTACGGACAACAAAATTAAC
AAGACCAATTCTTGGGAATAATGCTGTTGGGGAAATTGAAACCATCAAAG
CCCCAAAAATTGTATCAGGACCTTTAACAGAAATGATTTTGCGTTATCAA
TATCATCTTACTGAATGTGCGGAGGCTGTTTCTTTTGATCAAGGAGCACT
cacaaaacaaataaaagagacTGATGCATTGGCATCGAGAATATATAAAA
GttcaaatgagaaaaacaaGGCTTGCGAAAAGGCCATCTCTCAAATTGAA
ACAGTAAAGGATCTAACTAACACACTCAGACAAATTGAGAATAATATGAG
CACTGTAATagctcttttcaaaaaagtaaacaaaaactttcCAATGGAAG
ACCAAATTTATGATCCTGAATTCCTATAGCATTTTTGTTACCTATATTGA
TATCTGATTAGGATTTAGATTCTCTACCATTTTCTTTCGTGCTGCTTTTT
TTGGGTTAATTAACTGATGATCTAGTTCGAATTACTGTTAATTCATTCTG
tggtttaatttgaaatttaaaaaggagGGATGTATTATTGTGTATTATTG
TgtatcaattttttaaataatttattcAATCAAgtatattttttgtaaat
aacaTTTTACAtttgcattttcagaaaaacatCACTGTTTGAAATATAAC
AGTACTTTGTCATTCTTCTATGCCATTTTCATGACTAGGAAAcattttgc
ttttgtttatcAACAAAGGGTCTCCATGTATCCAGATCTTTttgtttatg
tatttttttgttttttatcttttagaaaaaataatagaaaatgtTAATTT
GAATAGCAGAATGAGTAAAGCACCTAAAAGGAAGGGTAGACGTAAAAAGA
AAGATAGACCTGAATTAGAGTTCATCGAAAGTCCTATTGATAAATACTCC
AGTGTTGATCATCCTGATTTTGGTGAGCCAATTGAATTTCCGACATCTAT
CGTGAATGGACAAACACAATGGATAACGCCTCACATAACCCAAGTAAATG
TCACTCCAAAACAAAAACGGTCGGGTATGAAAAGATtgactaaaaaagag
aaatcaGCCAAAGTTGTATTGAAAAAACAAGACGATAACCTGATGCATGA
TTTATCAACTCAAATTGAGTACAATGAGATTGAAGAAGATGAGACCATAG
TCCTTGGTGGTAACAGAAGATACACTAGAAGTATGGCAAAAACATTTTGC
CGCTCACCGGAAAAGGAGAATGTAACTTTAATCGATGACATAGATTCACC
AAATCTACCTTCTAATTTATCTACACCAGAACTGGAAAACACCTTAACTT
CTCGTTGCACAGAATTGAAAAACAATTTCTCATCAGAAAAGACACCTGGA
AAATCCCCTCATTATTTGTTTAGGGGTCAaacaccaaaatcaaaaagttt
cattGTCCTTGCAAAGGATACTCCCTTATGACATTGAAGGTGTTTTGTCG
CTTGTTTGTAAATAACTGTAATTTAAGAATCCTTTTGTACATTTAATAAC
TTATTATTATAATTTTATCTTTAGACACATCAACACACATTCTTTTTGAA
TCAGTATAAATTTTGAGCTTCTGGCTTGCTCTAGTTTTAGTCTAAAATCG
ATTatgttatgttatgattctctaagATTtcatttcctttaaaaatgatt
tcaagtCCAAATAATTGACTGCAAAATGTAGGTGGAGCTTTTATTCtgtt
ttctaaaatattttattttcatctttttcttcaGTGGAACattatattaa
aataaaaaatgtgacAGTGAATCAATGAGTGAGAAACGCCGACGTGCAAG
GGTCCAAGGGGGGTGGGCTTCAACCTCCAAGCCACGAAGAGATGAGGGAC
CAACAAAGATTGccaacaaagatgaaaaatatcctattaatttcaaattt
aaaccAACTGTAGAGAACAGAAGTAAGCCTAAAGAGCTGGTCATAAAgaa
GAATGGGGTTCATCAACTGAGTGATACTGACAATGGactatccagGATAT
TTctccaaaatgaatttttcgaTAGCAATGAATGTGAATGGATTTTTGAA
CAGTTGCATGCTGAGGTGCCTTGGAAGCAAGAACTCATTAAAATTAAAGG
TGAAACAGTAGAACAACCAAGACATACAGCATGGTTTGGAGATATTACAT
ACACATACTCAGGACTTACACTAAATCCACATCAGTTTTCACCACTGTTG
ATCATGATCAGAGACAAGATTGAATCATATATGAATGAGCAGCAGATCAA
TCGCGTGCCATTCAACTCAATGCTGGCAAATTTGTATCGTGGCGAGAAAG
ACAGTATCGACTGGCATTCAGACGATGAAGTATCTTTACAAAGAAATCCT
GTCATTGCTTCTTTATCATTTGGTgaaacaagaaattttgaaCTGCGGCG
GAAAGACCAAAGTGAAATTATTGATGGTGAAGTTGATTACACTTATTCGC
AACACGTTAAAGTACCTCTATCCAATGGTAGTTTGCTAATCATGGATGGA
GCTTGTCAAGAAGACTGGCAGCATAGTGTTCCAAAAGAATACCATGATCG
ACAGCCAAGGATCAATTTGACATTTAGAACAATTTATCCAAGCTAAAAGT
TGGCCTTTTGACCATCATGTtctgttgaaagaaaaatataaagctTATTG
CATATTTATATTAATGTTATGAAATTTTTACACTGACATTTATGTATTGG
GTTTAACGATTATTCTAATGAAGCATTATAGTAAAGAAGGACATTAGAGA
TTGCACAAGAGATTTTTCATATTGTACAGTTTTGAGTTGAGAGGCTCCAG
AAAATAATATCCTCTTAAATTTTGTCTTTGGTCAAAAATTCATCTTGATG
AAATTcaacaatttttatttgaagtgtTTTGAATTCATAATTCCAAAGAT
TtgaaagaagtatttttttggGCAGTTATATTTAGTGGTCTAtagaaaat
caaattaatttgtcattcgtttaaaaaaatatttacgcTGATTTATTTAT
CACTTTATTACTTAGTTCGACACTTTTTTAGAATTATgcattttttatag
aaaatttataactatcaaaaagcttttattattatttaactagaataatg
agaaaatatatttgattaCTGTTATATCTCTTTATTATTGCAACAGTAGG
Run BLAST on NCBI

protein sequence of TCONS_00070388-protein

>TCONS_00070388-protein ID=TCONS_00070388-protein|Name=TCONS_00070388-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
MSEKRRRARVQGGWASTSKPRRDEGPTKIANKDEKYPINFKFKPTVENRS
KPKELVIKKNGVHQLSDTDNGLSRIFLQNEFFDSNECEWIFEQLHAEVPW
KQELIKIKGETVEQPRHTAWFGDITYTYSGLTLNPHQFSPLLIMIRDKIE
SYMNEQQINRVPFNSMLANLYRGEKDSIDWHSDDEVSLQRNPVIASLSFG
ETRNFELRRKDQSEIIDGEVDYTYSQHVKVPLSNGSLLIMDGACQEDWQH
SVPKEYHDRQPRINLTFRTIYPS
Run BLAST on NCBI

transcript from alignment at scaffold_55:77076..85380-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070388 ID=TCONS_00070388|Name=TCONS_00070388|organism=Clytia hemisphaerica|type=transcript|length=8305bp|location=Sequence derived from alignment at scaffold_55:77076..85380- (Clytia hemisphaerica)
CGTATACTCCCCTGTATAGTACACGTATACTAAACAGCAAGTCAGAAATT
TGACCCTGACACCCCCATGTATAGTACACAAGTACTAAACAGCAAAAAAA
ATTTGAAAACACCCACCCACCCCATGATACATGCCGCTTTTTTGTACATG
GACCCCCCCCTGGCTATATTGCTAGCTTTATGTCTGGTATAGTTGTGCAA
CGCTGTCCAATGAGTGGAGGGATGCGTTCATCTGGTTTTGAAAAGACACT
GGAGAATTGGTGGTTCCGTACGTCTGCTTTCTTTTTGTCATCAATGTGGA
TGTGACCCTTGTCACAAAGAGGGGCAACACCATCATTATCACACTTACGA
GATTTTATAAATGTAAAACACTTTTTTTAGGATTGTTGTTCTCTCCCGGA
TCAACACATTTCACTACATAATTGTTGAATGCTGCTCTACAGGCTTTCGA
TCTGACCACTCAAGAGCAGTTGATTTTACGTAGGATCGGTTTGTTAAGAG
TTTGTATAAGTTGAATATGGAGTGTGGGTATAAGTATCTAAAAGGTTTGT
TTTTATTTCGTTTTATCAAGACATAAAAGGGTGATGCAAGTAGTTGATGA
AATTGCGTACAGTAGGTATAACCCGTATTTTCCCAATAAATTCGATATTC
CAACTGTAAAAAAGGAAAACACTTTTTTTGAACAGACACATCGGATGGAA
AGAACTGATTTGAAAGCTCAGGTTTGCTGACTTAATATGAAATATACTTC
ACTTGTCTTATTTTCTTTTTTAAATTGTTTGTGAATGTGACATGTGTCTG
GTGTTTGGCTTTCACATACAGTCTCTTTCATCCAACCTACTTTGTGCATT
GTGGGAAGACAAGAATAGAATTTGATATAATAAAGGTATTTTATTCTTAG
GTGACTATTTACTAAGTTATTTAAAAAGAAATGGGACAAGATCAAAGTAC
TGTTGATGGTGCTCAAAGACGAGATCCACGGCAACGCTCAGAATCGTCAG
CAAAAAAAGTCAATCAGATTGTTGTTGTGGCAAATAAAACAGAAACAAAG
AAGAAAGATGTTGACGAAGATATGAAAAATCTACGGACAACAAAATTAAC
AAGACCAATTCTTGGGAATAATGCTGTTGGGGAAATTGAAACCATCAAAG
CCCCAAAAATTGTATCAGGACCTTTAACAGAAATGATTTTGCGTTATCAA
TATCATCTTACTGAATGTGCGGAGGCTGTTTCTTTTGATCAAGGAGCACT
CACAAAACAAATAAAAGAGACTGATGCATTGGCATCGAGAATATATAAAA
GTTCAAATGAGAAAAACAAGGCTTGCGAAAAGGCCATCTCTCAAATTGAA
ACAGTAAAGGATCTAACTAACACACTCAGACAAATTGAGAATAATATGAG
CACTGTAATAGCTCTTTTCAAAAAAGTAAACAAAAACTTTCCAATGGAAG
ACCAAATTTATGATCCTGAATTCCTATAGCATTTTTGTTACCTATATTGA
TATCTGATTAGGATTTAGATTCTCTACCATTTTCTTTCGTGCTGCTTTTT
TTGGGTTAATTAACTGATGATCTAGTTCGAATTACTGTTAATTCATTCTG
TGGTTTAATTTGAAATTTAAAAAGGAGGGATGTATTATTGTGTATTATTG
TGTATCAATTTTTTAAATAATTTATTCAATCAAGTATATTTTTTGTAAAT
AACATTTTACATTTGCATTTTCAGAAAAACATCACTGTTTGAAATATAAC
AGTACTTTGTCATTCTTCTATGCCATTTTCATGACTAGGAAACATTTTGC
TTTTGTTTATCAACAAAGGGTCTCCATGTATCCAGATCTTTTTGTTTATG
TATTTTTTTGTTTTTTATCTTTTAGAAAAAATAATAGAAAATGTTAATTT
GAATAGCAGAATGAGTAAAGCACCTAAAAGGAAGGGTAGACGTAAAAAGA
AAGATAGACCTGAATTAGAGTTCATCGAAAGTCCTATTGATAAATACTCC
AGTGTTGATCATCCTGATTTTGGTGAGCCAATTGAATTTCCGACATCTAT
CGTGAATGGACAAACACAATGGATAACGCCTCACATAACCCAAGTAAATG
TCACTCCAAAACAAAAACGGTCGGGTATGAAAAGATTGACTAAAAAAGAG
AAATCAGCCAAAGTTGTATTGAAAAAACAAGACGATAACCTGATGCATGA
TTTATCAACTCAAATTGAGTACAATGAGATTGAAGAAGATGAGACCATAG
TCCTTGGTGGTAACAGAAGATACACTAGAAGTATGGCAAAAACATTTTGC
CGCTCACCGGAAAAGGAGAATGTAACTTTAATCGATGACATAGATTCACC
AAATCTACCTTCTAATTTATCTACACCAGAACTGGAAAACACCTTAACTT
CTCGTTGCACAGAATTGAAAAACAATTTCTCATCAGAAAAGACACCTGGA
AAATCCCCTCATTATTTGTTTAGGGGTCAAACACCAAAATCAAAAAGTTT
CATTGTCCTTGCAAAGGATACTCCCTTATGACATTGAAGGTGTTTTGTCG
CTTGTTTGTAAATAACTGTAATTTAAGAATCCTTTTGTACATTTAATAAC
TTATTATTATAATTTTATCTTTAGACACATCAACACACATTCTTTTTGAA
TCAGTATAAATTTTGAGCTTCTGGCTTGCTCTAGTTTTAGTCTAAAATCG
ATTATGTTATGTTATGATTCTCTAAGATTTCATTTCCTTTAAAAATGATT
TCAAGTCCAAATAATTGACTGCAAAATGTAGGTGGAGCTTTTATTCTGTT
TTCTAAAATATTTTATTTTCATCTTTTTCTTCAGTGGAACATTATATTAA
AATAAAAAATGTGACAGTGAATCAATGAGTGAGAAACGCCGACGTGCAAG
GGTCCAAGGGGGGTGGGCTTCAACCTCCAAGCCACGAAGAGATGAGGGAC
CAACAAAGATTGCCAACAAAGATGAAAAATATCCTATTAATTTCAAATTT
AAACCAACTGTAGAGGTAAAGATATAATTTTTTGGTTTTTCTTATTTTGA
TTATCTTTTTGGTGTGTACTGTTTTTGAAAATGAACTTTTTGATTTCTAT
AAAATTGACAAAAAGTGAATAAAAGTTTTTAAAAAATATCAACAAGTAAA
AGAAACAATGACATGTTCTATCTTTGCAAGTTTGCAATAGAATGAAAAAC
CTTCAAAATATATTATATTTGTCTTCAGAACAGAAGTAAGCCTAAAGAGC
TGGTCATAAAGTAAGTTTTCGCTTATTATTACCTCTCCATCAAATTGTTA
TGAATAGAATTATACGGGTCAAGCAATTATCTTAAATTTTGACCTAATAT
TGTTTGGAAACTTTTAGTAGTTGTGACTTTGTCTTTCAAGGATATATATA
ATTTGTTTTTTATATGCCATACAAAGCAACCCAGACTGCATCATTTGAAA
ATTCCAGGTGTGTGGTTAATCACACCCTAGAATGTTAATTTTAGTAATTT
AGGCGTGTGATAAGTGAGTGCTATAAACAACTTTTAGTTGTGAAACTAAC
TTTATGTTGTGTGATTGATGGCATGCTCCTTAGACATTTTAGGTGTTTAT
GGGGGTGTGCGCGTGCTATGGCACGCCTCAAATGATGTAGCCTGGCAAGC
CTGTCATACTGATTGATGCAAATGTTGCCATTGTTTATTTTTCATTTTTA
GGAAGAATGGGGTTCATCAACTGAGTGATACTGACAATGGACTATCCAGG
TCAGAGTGCTAGATAATATTTTATTATGCTATGCTATTTTAGCTTAATTG
AGTTTTGATTCCTGAAAACCTAATACTCTGAAGATTCATTTATTTGACAA
TTTTCTGACAATTCCTTCAGTGGATTAATTTTCGCGCTTTTCGCAAATTT
TGGTCATTTTCGCAAAATTTAATCCAGGGCAAAATTTTTAAAATCCTTGA
TACGCAAAAATTAATCCTGGTTCTCATGATAATTAATCCACTTAAGGTGG
TTAGAGTTTAAATTAAAAGTAATACTCATTTAGAATATTTCCATTGTTCT
CTTTTTGGACCTACCTTAAGGTAGTCCTTTAAATTAACCCTTGTCCGTTC
GTCCGTTCGTCCGTCCGTTCGTTCGTCTGTTGCCAGCTTTTCTCGGGATC
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGAGATTTCAT
CATTAGTTTTTTCTGATTTTTTGCTCAAAGATGCGTATTAACAATGCCCA
AAACATGGCCTAGTCCAATTCTTGAGAAAAAATTTTTTCCGGCTGAAAAT
GCCGGAAATATGCCGGAAATCGCCGTTTTTCTGGATTTTCATTGGATTTT
TTCCATATAATTGGTTTTTTTTTTCATTCAAAAACATTATTAATAGCAAT
GCCCACCATTAAGTNNATTTTTGAAGCCGGAACTTTCTAAAAATCGCCGG
AACAGCCGATTTTCGCCGGAAAAACGGTTTTTCTTGAATTTCTTGAGCTG
TACTTTATATTTTTTCATTTTTTCAATTTTGCACACTGATGCAAAATGTC
AATACCTAAATTGTGATAGAGCCCGATTTTCGAAAAAAAATTCAATTCCT
GCCGAAAATGCCGGAAATATGCCGGAAAAACTGGTTTTTTGGCATTTTCT
CAAGATTTTATCATTAGTTTTTTCTGATTTTTTGCTCAAAGAATCGTATT
AACAATGCCCAAAACTTGACCTAGTCCGACTCTTGAGAAAAAATTTTTCC
GGTTTAGTTTACTTATATTTCTATGCTTTTCACACAAAAACATTATTCAT
AACAATGCTCATTATCAAGCATGATTCAATTGTCAATAAAACTGATTTTT
GCGACCAGAACTTCCTATTTATTATTTCCCTACAACCCTTCCCTCTCCCC
CCCATCAACAATCAATGATGAATTTATTGTGTTGTGTATTTTCGCTAAAC
GCTATATTTTCTGACTGATTTTTTTCATTTTTCTTTTCGCATTGCTATCT
AACTTTAATCATCAGGTAGGTCCATTCAGCATATTGCTTGTTATGTTACA
GGATATTTCTCCAAAATGAATTTTTCGATAGCAATGAATGTGAATGGATT
TTTGAACAGTTGCATGCTGAGGTGCCTTGGAAGCAAGAACTCATTAAAAT
TAAAGGTTTCATTACTATATAATATAGAAGCTCTAAATTCCCTCACACCA
AAAATGCTTTTGAAAGAGGATTTCAGAGAAATATTCGACCAACTAGAAAT
TAAAATATATTTTTCCCAATGCATTGAGATCAGCGTAGATAAATCTCGTG
ATCCAAGCCACAATAGACTTCCCTTTTAAAACTAAACCCAAATTTTGAAG
TTTAGGAATGGAAGACGTGTAGTAACTAATGCTTGCTATTATACTTAAGC
GTTTATAATGTTATTATTTTAGGTGAAACAGTAGAACAACCAAGACATAC
AGCATGGTTTGGAGATATTACATACACATACTCAGGACTTACACTAAATC
CACATCAGGTTTGAATGACCTATTCACATACAGTAATCCAGAAAAATGGA
CATAGTTGAAACTCAGACTGTTAACTTTCTTGAAGTTCATTTTGATCCGT
ATAATAATTGTTACTGGGCTGAAATGAAAATCATTTGTTTTCTGGTTAAC
TAGCTGTTGTAAATTCAGATGCAGATGACCCCTAATTGAAACTTAGAATT
CTTTTTTGTTCGGTGTAGGTATTTTAATCTTAAATTCAATTTAGTTTGCT
TTTCTATATACTTTTAGTTTTCACCACTGTTGATCATGATCAGAGACAAG
ATTGAATCATATATGAATGAGCAGCAGATCAATCGCGTGCCATTCAACTC
AATGCTGGCAAATTTGTATCGTGGCGAGAAAGACAGTATCGTAAATACAT
CATTTCTTGCTTTTTTCTATACTTTAAACTCAACAAAAAATTACGAATCA
AATTTCATCTTTAACCCATTAAATGCCATTGAATAACTTCAAATTTTCTT
ATATTTTTTTTTGATTTCAAACGCCTGTACACACCCCAACTAAAAATAAA
ATACCAATCTGGACTTTTATTGGACGTTTTTTATTTAGGTGGGGTTAAAA
AACCTAGTACAGGACTGAATAAATTGAGCGATCTCGTATAATACCATTGG
CACTTTTAATGGGTTAAGATCATTATTTCCAACACCATAACTGCACAAAA
CGAGGACCACTTAGTTCTATTCACTTGGATGTCTAAAGATGTGAACTGAT
TCCCTTTCCATATCTCTTCAGGACTGGCATTCAGACGATGAAGTATCTTT
ACAAAGAAATCCTGTCATTGCTTCTTTATCATTTGGTGAAACAAGAAATT
TTGAACTGCGGCGGAAAGACCAAAGTGAAGTAAAAGTTTTAATATTTTAA
TTGTTTTTTTCAACTATAAAGTAGCATTATCTGTATTATTTTCCAAATAA
AAATGGTTTGGTTGTATTTTTTGCTTATTTTTAGAGGGAATTTTGTACTC
TTTTATATATATGCTAACAATTAAAACATTTACCAAACTTTTACATGCAG
ATTATTGATGGTGAAGTTGATTACACTTATTCGCAACACGTTAAAGTACC
TCTATCCAATGGTAGTTTGCTAATCATGGATGGAGCTTGTCAAGAAGACT
GGCAGGTATATAGTCTAAGAATTTCTCTAAACAAAAAGGAGAAACTCTTG
CAAAAATTTCCAATTATTTCTAATTTTTGTCAAAATTAAGTGGAGTTGTA
GGGTGAACCTTCTCTGGACCTGCAAGTTTGTTCAACATCATAATGTTAAA
TTGTTTTATCTTTCATATCATTCTAGCATAGTGTTCCAAAAGAATACCAT
GATCGACAGCCAAGGATCAATTTGACATTTAGAACAATTTATCCAAGCTA
AAAGTTGGCCTTTTGACCATCATGTTCTGTTGAAAGAAAAATATAAAGCT
TATTGCATATTTATATTAATGTTATGAAATTTTTACACTGACATTTATGT
ATTGGGTTTAACGATTATTCTAATGAAGCATTATAGTAAAGAAGGACATT
AGAGATTGCACAAGAGATTTTTCATATTGTACAGTTTTGAGTTGAGAGGC
TCCAGAAAATAATATCCTCTTAAATTTTGTCTTTGGTCAAAAATTCATCT
TGATGAAATTCAACAATTTTTATTTGAAGTGTTTTGAATTCATAATTCCA
AAGATTTGAAAGAAGTATTTTTTTGGGCAGTTATATTTAGTGGTCTATAG
AAAATCAAATTAATTTGTCATTCGTTTAAAAAAATATTTACGCTGATTTA
TTTATCACTTTATTACTTAGTTCGACACTTTTTTAGAATTATGCATTTTT
TATAGAAAATTTATAACTATCAAAAAGCTTTTATTATTATTTAACTAGAA
TAATGAGAAAATATATTTGATTACTGTTATATCTCTTTATTATTGCAACA
GTAGG

Coding sequence (CDS) from alignment at scaffold_55:77076..85380-

>TCONS_00070388 ID=TCONS_00070388|Name=TCONS_00070388|organism=Clytia hemisphaerica|type=CDS|length=7398bp|location=Sequence derived from alignment at scaffold_55:77076..85380- (Clytia hemisphaerica)
CATAGTGTTCCAAAAGAATACCATGATCGACAGCCAAGGATCAATTTGAC
ATTTAGAACAATTTATCCAAGCTAAATTATTGATGGTGAAGTTGATTACA
CTTATTCGCAACACGTTAAAGTACCTCTATCCAATGGTAGTTTGCTAATC
ATGGATGGAGCTTGTCAAGAAGACTGGCAGGACTGGCATTCAGACGATGA
AGTATCTTTACAAAGAAATCCTGTCATTGCTTCTTTATCATTTGGTGAAA
CAAGAAATTTTGAACTGCGGCGGAAAGACCAAAGTGAATTTTCACCACTG
TTGATCATGATCAGAGACAAGATTGAATCATATATGAATGAGCAGCAGAT
CAATCGCGTGCCATTCAACTCAATGCTGGCAAATTTGTATCGTGGCGAGA
AAGACAGTATCGTGAAACAGTAGAACAACCAAGACATACAGCATGGTTTG
GAGATATTACATACACATACTCAGGACTTACACTAAATCCACATCAGGAT
ATTTCTCCAAAATGAATTTTTCGATAGCAATGAATGTGAATGGATTTTTG
AACAGTTGCATGCTGAGGTGCCTTGGAAGCAAGAACTCATTAAAATTAAA
GGAAGAATGGGGTTCATCAACTGAGTGATACTGACAATGGACTATCCAGA
ACAGAAGTAAGCCTAAAGAGCTGGTCATAAAATGAGTGAGAAACGCCGAC
GTGCAAGGGTCCAAGGGGGGTGGGCTTCAACCTCCAAGCCACGAAGAGAT
GAGGGACCAACAAAGATTGCCAACAAAGATGAAAAATATCCTATTAATTT
CAAATTTAAACCAACTGTAGAGCATAGTGTTCCAAAAGAATACCATGATC
GACAGCCAAGGATCAATTTGACATTTAGAACAATTTATCCAAGCTAAATT
ATTGATGGTGAAGTTGATTACACTTATTCGCAACACGTTAAAGTACCTCT
ATCCAATGGTAGTTTGCTAATCATGGATGGAGCTTGTCAAGAAGACTGGC
AGGACTGGCATTCAGACGATGAAGTATCTTTACAAAGAAATCCTGTCATT
GCTTCTTTATCATTTGGTGAAACAAGAAATTTTGAACTGCGGCGGAAAGA
CCAAAGTGAATTTTCACCACTGTTGATCATGATCAGAGACAAGATTGAAT
CATATATGAATGAGCAGCAGATCAATCGCGTGCCATTCAACTCAATGCTG
GCAAATTTGTATCGTGGCGAGAAAGACAGTATCGTGAAACAGTAGAACAA
CCAAGACATACAGCATGGTTTGGAGATATTACATACACATACTCAGGACT
TACACTAAATCCACATCAGGATATTTCTCCAAAATGAATTTTTCGATAGC
AATGAATGTGAATGGATTTTTGAACAGTTGCATGCTGAGGTGCCTTGGAA
GCAAGAACTCATTAAAATTAAAGGAAGAATGGGGTTCATCAACTGAGTGA
TACTGACAATGGACTATCCAGAACAGAAGTAAGCCTAAAGAGCTGGTCAT
AAAATGAGTGAGAAACGCCGACGTGCAAGGGTCCAAGGGGGGTGGGCTTC
AACCTCCAAGCCACGAAGAGATGAGGGACCAACAAAGATTGCCAACAAAG
ATGAAAAATATCCTATTAATTTCAAATTTAAACCAACTGTAGAGCATAGT
GTTCCAAAAGAATACCATGATCGACAGCCAAGGATCAATTTGACATTTAG
AACAATTTATCCAAGCTAAATTATTGATGGTGAAGTTGATTACACTTATT
CGCAACACGTTAAAGTACCTCTATCCAATGGTAGTTTGCTAATCATGGAT
GGAGCTTGTCAAGAAGACTGGCAGGACTGGCATTCAGACGATGAAGTATC
TTTACAAAGAAATCCTGTCATTGCTTCTTTATCATTTGGTGAAACAAGAA
ATTTTGAACTGCGGCGGAAAGACCAAAGTGAATTTTCACCACTGTTGATC
ATGATCAGAGACAAGATTGAATCATATATGAATGAGCAGCAGATCAATCG
CGTGCCATTCAACTCAATGCTGGCAAATTTGTATCGTGGCGAGAAAGACA
GTATCGTGAAACAGTAGAACAACCAAGACATACAGCATGGTTTGGAGATA
TTACATACACATACTCAGGACTTACACTAAATCCACATCAGGATATTTCT
CCAAAATGAATTTTTCGATAGCAATGAATGTGAATGGATTTTTGAACAGT
TGCATGCTGAGGTGCCTTGGAAGCAAGAACTCATTAAAATTAAAGGAAGA
ATGGGGTTCATCAACTGAGTGATACTGACAATGGACTATCCAGAACAGAA
GTAAGCCTAAAGAGCTGGTCATAAAATGAGTGAGAAACGCCGACGTGCAA
GGGTCCAAGGGGGGTGGGCTTCAACCTCCAAGCCACGAAGAGATGAGGGA
CCAACAAAGATTGCCAACAAAGATGAAAAATATCCTATTAATTTCAAATT
TAAACCAACTGTAGAGCATAGTGTTCCAAAAGAATACCATGATCGACAGC
CAAGGATCAATTTGACATTTAGAACAATTTATCCAAGCTAAATTATTGAT
GGTGAAGTTGATTACACTTATTCGCAACACGTTAAAGTACCTCTATCCAA
TGGTAGTTTGCTAATCATGGATGGAGCTTGTCAAGAAGACTGGCAGGACT
GGCATTCAGACGATGAAGTATCTTTACAAAGAAATCCTGTCATTGCTTCT
TTATCATTTGGTGAAACAAGAAATTTTGAACTGCGGCGGAAAGACCAAAG
TGAATTTTCACCACTGTTGATCATGATCAGAGACAAGATTGAATCATATA
TGAATGAGCAGCAGATCAATCGCGTGCCATTCAACTCAATGCTGGCAAAT
TTGTATCGTGGCGAGAAAGACAGTATCGTGAAACAGTAGAACAACCAAGA
CATACAGCATGGTTTGGAGATATTACATACACATACTCAGGACTTACACT
AAATCCACATCAGGATATTTCTCCAAAATGAATTTTTCGATAGCAATGAA
TGTGAATGGATTTTTGAACAGTTGCATGCTGAGGTGCCTTGGAAGCAAGA
ACTCATTAAAATTAAAGGAAGAATGGGGTTCATCAACTGAGTGATACTGA
CAATGGACTATCCAGAACAGAAGTAAGCCTAAAGAGCTGGTCATAAAATG
AGTGAGAAACGCCGACGTGCAAGGGTCCAAGGGGGGTGGGCTTCAACCTC
CAAGCCACGAAGAGATGAGGGACCAACAAAGATTGCCAACAAAGATGAAA
AATATCCTATTAATTTCAAATTTAAACCAACTGTAGAGCATAGTGTTCCA
AAAGAATACCATGATCGACAGCCAAGGATCAATTTGACATTTAGAACAAT
TTATCCAAGCTAAATTATTGATGGTGAAGTTGATTACACTTATTCGCAAC
ACGTTAAAGTACCTCTATCCAATGGTAGTTTGCTAATCATGGATGGAGCT
TGTCAAGAAGACTGGCAGGACTGGCATTCAGACGATGAAGTATCTTTACA
AAGAAATCCTGTCATTGCTTCTTTATCATTTGGTGAAACAAGAAATTTTG
AACTGCGGCGGAAAGACCAAAGTGAATTTTCACCACTGTTGATCATGATC
AGAGACAAGATTGAATCATATATGAATGAGCAGCAGATCAATCGCGTGCC
ATTCAACTCAATGCTGGCAAATTTGTATCGTGGCGAGAAAGACAGTATCG
TGAAACAGTAGAACAACCAAGACATACAGCATGGTTTGGAGATATTACAT
ACACATACTCAGGACTTACACTAAATCCACATCAGGATATTTCTCCAAAA
TGAATTTTTCGATAGCAATGAATGTGAATGGATTTTTGAACAGTTGCATG
CTGAGGTGCCTTGGAAGCAAGAACTCATTAAAATTAAAGGAAGAATGGGG
TTCATCAACTGAGTGATACTGACAATGGACTATCCAGAACAGAAGTAAGC
CTAAAGAGCTGGTCATAAAATGAGTGAGAAACGCCGACGTGCAAGGGTCC
AAGGGGGGTGGGCTTCAACCTCCAAGCCACGAAGAGATGAGGGACCAACA
AAGATTGCCAACAAAGATGAAAAATATCCTATTAATTTCAAATTTAAACC
AACTGTAGAGCATAGTGTTCCAAAAGAATACCATGATCGACAGCCAAGGA
TCAATTTGACATTTAGAACAATTTATCCAAGCTAAATTATTGATGGTGAA
GTTGATTACACTTATTCGCAACACGTTAAAGTACCTCTATCCAATGGTAG
TTTGCTAATCATGGATGGAGCTTGTCAAGAAGACTGGCAGGACTGGCATT
CAGACGATGAAGTATCTTTACAAAGAAATCCTGTCATTGCTTCTTTATCA
TTTGGTGAAACAAGAAATTTTGAACTGCGGCGGAAAGACCAAAGTGAATT
TTCACCACTGTTGATCATGATCAGAGACAAGATTGAATCATATATGAATG
AGCAGCAGATCAATCGCGTGCCATTCAACTCAATGCTGGCAAATTTGTAT
CGTGGCGAGAAAGACAGTATCGTGAAACAGTAGAACAACCAAGACATACA
GCATGGTTTGGAGATATTACATACACATACTCAGGACTTACACTAAATCC
ACATCAGGATATTTCTCCAAAATGAATTTTTCGATAGCAATGAATGTGAA
TGGATTTTTGAACAGTTGCATGCTGAGGTGCCTTGGAAGCAAGAACTCAT
TAAAATTAAAGGAAGAATGGGGTTCATCAACTGAGTGATACTGACAATGG
ACTATCCAGAACAGAAGTAAGCCTAAAGAGCTGGTCATAAAATGAGTGAG
AAACGCCGACGTGCAAGGGTCCAAGGGGGGTGGGCTTCAACCTCCAAGCC
ACGAAGAGATGAGGGACCAACAAAGATTGCCAACAAAGATGAAAAATATC
CTATTAATTTCAAATTTAAACCAACTGTAGAGCATAGTGTTCCAAAAGAA
TACCATGATCGACAGCCAAGGATCAATTTGACATTTAGAACAATTTATCC
AAGCTAAATTATTGATGGTGAAGTTGATTACACTTATTCGCAACACGTTA
AAGTACCTCTATCCAATGGTAGTTTGCTAATCATGGATGGAGCTTGTCAA
GAAGACTGGCAGGACTGGCATTCAGACGATGAAGTATCTTTACAAAGAAA
TCCTGTCATTGCTTCTTTATCATTTGGTGAAACAAGAAATTTTGAACTGC
GGCGGAAAGACCAAAGTGAATTTTCACCACTGTTGATCATGATCAGAGAC
AAGATTGAATCATATATGAATGAGCAGCAGATCAATCGCGTGCCATTCAA
CTCAATGCTGGCAAATTTGTATCGTGGCGAGAAAGACAGTATCGTGAAAC
AGTAGAACAACCAAGACATACAGCATGGTTTGGAGATATTACATACACAT
ACTCAGGACTTACACTAAATCCACATCAGGATATTTCTCCAAAATGAATT
TTTCGATAGCAATGAATGTGAATGGATTTTTGAACAGTTGCATGCTGAGG
TGCCTTGGAAGCAAGAACTCATTAAAATTAAAGGAAGAATGGGGTTCATC
AACTGAGTGATACTGACAATGGACTATCCAGAACAGAAGTAAGCCTAAAG
AGCTGGTCATAAAATGAGTGAGAAACGCCGACGTGCAAGGGTCCAAGGGG
GGTGGGCTTCAACCTCCAAGCCACGAAGAGATGAGGGACCAACAAAGATT
GCCAACAAAGATGAAAAATATCCTATTAATTTCAAATTTAAACCAACTGT
AGAGCATAGTGTTCCAAAAGAATACCATGATCGACAGCCAAGGATCAATT
TGACATTTAGAACAATTTATCCAAGCTAAATTATTGATGGTGAAGTTGAT
TACACTTATTCGCAACACGTTAAAGTACCTCTATCCAATGGTAGTTTGCT
AATCATGGATGGAGCTTGTCAAGAAGACTGGCAGGACTGGCATTCAGACG
ATGAAGTATCTTTACAAAGAAATCCTGTCATTGCTTCTTTATCATTTGGT
GAAACAAGAAATTTTGAACTGCGGCGGAAAGACCAAAGTGAATTTTCACC
ACTGTTGATCATGATCAGAGACAAGATTGAATCATATATGAATGAGCAGC
AGATCAATCGCGTGCCATTCAACTCAATGCTGGCAAATTTGTATCGTGGC
GAGAAAGACAGTATCGTGAAACAGTAGAACAACCAAGACATACAGCATGG
TTTGGAGATATTACATACACATACTCAGGACTTACACTAAATCCACATCA
GGATATTTCTCCAAAATGAATTTTTCGATAGCAATGAATGTGAATGGATT
TTTGAACAGTTGCATGCTGAGGTGCCTTGGAAGCAAGAACTCATTAAAAT
TAAAGGAAGAATGGGGTTCATCAACTGAGTGATACTGACAATGGACTATC
CAGAACAGAAGTAAGCCTAAAGAGCTGGTCATAAAATGAGTGAGAAACGC
CGACGTGCAAGGGTCCAAGGGGGGTGGGCTTCAACCTCCAAGCCACGAAG
AGATGAGGGACCAACAAAGATTGCCAACAAAGATGAAAAATATCCTATTA
ATTTCAAATTTAAACCAACTGTAGAGCATAGTGTTCCAAAAGAATACCAT
GATCGACAGCCAAGGATCAATTTGACATTTAGAACAATTTATCCAAGCTA
AATTATTGATGGTGAAGTTGATTACACTTATTCGCAACACGTTAAAGTAC
CTCTATCCAATGGTAGTTTGCTAATCATGGATGGAGCTTGTCAAGAAGAC
TGGCAGGACTGGCATTCAGACGATGAAGTATCTTTACAAAGAAATCCTGT
CATTGCTTCTTTATCATTTGGTGAAACAAGAAATTTTGAACTGCGGCGGA
AAGACCAAAGTGAATTTTCACCACTGTTGATCATGATCAGAGACAAGATT
GAATCATATATGAATGAGCAGCAGATCAATCGCGTGCCATTCAACTCAAT
GCTGGCAAATTTGTATCGTGGCGAGAAAGACAGTATCGTGAAACAGTAGA
ACAACCAAGACATACAGCATGGTTTGGAGATATTACATACACATACTCAG
GACTTACACTAAATCCACATCAGGATATTTCTCCAAAATGAATTTTTCGA
TAGCAATGAATGTGAATGGATTTTTGAACAGTTGCATGCTGAGGTGCCTT
GGAAGCAAGAACTCATTAAAATTAAAGGAAGAATGGGGTTCATCAACTGA
GTGATACTGACAATGGACTATCCAGAACAGAAGTAAGCCTAAAGAGCTGG
TCATAAAATGAGTGAGAAACGCCGACGTGCAAGGGTCCAAGGGGGGTGGG
CTTCAACCTCCAAGCCACGAAGAGATGAGGGACCAACAAAGATTGCCAAC
AAAGATGAAAAATATCCTATTAATTTCAAATTTAAACCAACTGTAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043839XLOC_043839Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070388-exon-scaffold_55-1575043694:82366..85380TCONS_00070388-exon-scaffold_55-1575043694:82366..85380Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1575043694:82121..82152TCONS_00070388-exon-scaffold_55-1575043694:82121..82152Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1575043694:81632..81679TCONS_00070388-exon-scaffold_55-1575043694:81632..81679Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1575043694:79376..79479TCONS_00070388-exon-scaffold_55-1575043694:79376..79479Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1575043694:79023..79108TCONS_00070388-exon-scaffold_55-1575043694:79023..79108Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1575043694:78641..78763TCONS_00070388-exon-scaffold_55-1575043694:78641..78763Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1575043694:78152..78259TCONS_00070388-exon-scaffold_55-1575043694:78152..78259Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1575043694:77876..77980TCONS_00070388-exon-scaffold_55-1575043694:77876..77980Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1575043694:77076..77704TCONS_00070388-exon-scaffold_55-1575043694:77076..77704Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1510915933:82366..85380TCONS_00070388-exon-scaffold_55-1510915933:82366..85380Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1510915933:82121..82152TCONS_00070388-exon-scaffold_55-1510915933:82121..82152Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1510915933:81632..81679TCONS_00070388-exon-scaffold_55-1510915933:81632..81679Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1510915933:79376..79479TCONS_00070388-exon-scaffold_55-1510915933:79376..79479Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1510915933:79023..79108TCONS_00070388-exon-scaffold_55-1510915933:79023..79108Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1510915933:78641..78763TCONS_00070388-exon-scaffold_55-1510915933:78641..78763Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1510915933:78152..78259TCONS_00070388-exon-scaffold_55-1510915933:78152..78259Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1510915933:77876..77980TCONS_00070388-exon-scaffold_55-1510915933:77876..77980Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1510915933:77076..77704TCONS_00070388-exon-scaffold_55-1510915933:77076..77704Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1491911889:82366..85380TCONS_00070388-exon-scaffold_55-1491911889:82366..85380Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1491911889:82121..82152TCONS_00070388-exon-scaffold_55-1491911889:82121..82152Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1491911889:81632..81679TCONS_00070388-exon-scaffold_55-1491911889:81632..81679Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1491911889:79376..79479TCONS_00070388-exon-scaffold_55-1491911889:79376..79479Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1491911889:79023..79108TCONS_00070388-exon-scaffold_55-1491911889:79023..79108Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1491911889:78641..78763TCONS_00070388-exon-scaffold_55-1491911889:78641..78763Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1491911889:78152..78259TCONS_00070388-exon-scaffold_55-1491911889:78152..78259Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1491911889:77876..77980TCONS_00070388-exon-scaffold_55-1491911889:77876..77980Clytia hemisphaericaexon
TCONS_00070388-exon-scaffold_55-1491911889:77076..77704TCONS_00070388-exon-scaffold_55-1491911889:77076..77704Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070388-proteinTCONS_00070388-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_55supercontigscaffold_55:77076..85380 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.8894	45.5744	28.3555	26.1217	17.2147	13.7624	13.8383	14.3184	14.7595	13.5077	15.5747	12.01	13.7003	12.643	10.0702	10.5516	14.0555	13.551	9.18999	12.2955	12.8645	12.2202	41.3193	36.426	18.0072	20.2995	14.9514	10.4323	27.7843	26.2325
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027450AlkB-like
IPR005123Oxoglu/Fe-dep_dioxygenase
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
Blast
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BLAST of TCONS_00070388 vs. Swiss-Prot (Human)
Match: ALKB3 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens GN=ALKBH3 PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 4.536e-75
Identity = 139/289 (48.10%), Postives = 183/289 (63.32%), Query Frame = 1 
Query: 2875 MSEKRRRARVQGGWASTSKPRRDEGPTKIAN-----------KDEKYPIN---FKFK-PTVENRSKPKELVIKKNGVHQLSDTDNGLSRIFLQNEFFDSNECEWIFEQLHAEVPWKQELIKIKGETVEQPRHTAWFGDITYTYSGLTL--NPHQFSPLLIMIRDKIESYMNEQQINRVPFNSMLANLYRGEKDSIDWHSDDEVSLQRNPVIASLSFGETRNFELRRKDQSEIIDGEVDYTYSQHVKVPLSNGSLLIMDGACQEDWQHSVPKEYHDRQPRINLTFRTIYP 3690
            M EKRRRARVQG WA+  K +    P   A            K++++ ++   F FK P    R  P+  VI + GV+++S +  G+SR+ L   F D  E +WI EQL  +VPWKQ     +  T +QPR TAW+G++ YTYS +T+  NPH + P+L  ++++IE            FNS+L NLYR EKDS+DWHSDDE SL R P+IASLSFG TR FE+R+K   E      DYTY + VK+PL +G+LLIM+GA Q DWQH VPKEYH R+PR+NLTFRT+YP
Sbjct:    1 MEEKRRRARVQGAWAAPVKSQAIAQPATTAKSHLHQKPGQTWKNKEHHLSDREFVFKEPQQVVRRAPEPRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPH-WHPVLRTLKNRIEENTGHT------FNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPE---ENGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYP 279
The following BLAST results are available for this feature:
BLAST of TCONS_00070388 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALKB34.536e-7548.10Alpha-ketoglutarate-dependent dioxygenase alkB hom... [more]
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