TCONS_00069673 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069673
Unique NameTCONS_00069673
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2886

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069673 ID=TCONS_00069673|Name=TCONS_00069673|organism=Clytia hemisphaerica|type=transcript|length=2886bp
TAATAATAAATGTTTGATAAGCCTTTTCATTGAACCGAGTTTCGTCTCTC
AATATATGAGAATATATCAATCGAAAACTGTGAATGAAAATATGATCAGT
TGATAAAAAACTCGCTGgagaaaacatcaaaaaatatatttctcagAAGA
AAGAGATTGTCTATATATATTTTGGTGTGTTGAAAGGAAACGTTTCTgaa
attttagttttgttttttttgtggggAAAGATGGCTGTTGAGAGAGCAGA
GGAACTCCGGTTGTTTTGCCCGACCGAACCATTGGCCAAAATGATGAGAG
GAGATGTAAGGTCGAAGGAGGATTCCTTCAAATTCACCATGACGCAACTT
CAACAACGTCATCCGTCCGTCACTAAACCGTTCCAAGAAGAATTCGTCGA
CGTTAACATCAAAAATGGATTCTTCGACGCTGCCAACAAAATGAGACGAC
AagGTGTTTTGACAGACGTATCGCTAGTTGTTGATCAACAAACCTTTCAC
ACTCATAAACTGATATTATGTTCATGCAGTGATTATTTTACTAGCATGTT
TAACGGTCCTTTGGCGCATCACGGCCAACAAGTCTTCATATCGGGCGTCA
GTGCCCAAAGCATGGAAGCTATTTTGAATTACGTTTATACGGGATCGATT
ATCATCAACGAGGAGTTTATACAAGACATTTTAGAAGCAGCTtgtttgtt
tctattgaaaaactTACGCGAACGATGCGCGCGATTTCTGCGCGACCGAT
TAGATGGTGGCAATTGTTTACAGATTTTCAGTATCGCTAAAAGTTGTTCA
TTGTTGGCTTTGATGGAGGATTCCCTAGAGTTCATCTCCGCGATCTTTCA
AGATATTTCAGCGCTGAATGATTTTAAACAATTAAGTTTTGATGAACTTA
TTGATGTATTATCTCTTGAAGATTTAGCAGTGCCAAGTGAAGATTACGTT
TTAGAGGCAGCATTTCGATGGTTAAATCATGATTTATAcggacgtcagca
aaaatttgtaGAAGTGCTAAAAGCTATACATTTACCATACGTTAGTGACG
ATATGTTAAAACAGGTCATGGAGAATGAAAAATCTTTACGTACTTTTCCT
GAGCTGGAAATTCTCTTCCGTTCCGCCTTACGTCTTACCGTTGAAAACTG
GACTCTCTCCAAAGACAGTGATTTTAATTTACTCCAACCAAAATCATGGA
TAAATCCACGAAAATGTATTCAATGTATACCGAGTCTTATCGCTATGGGT
GGGCCTACATTGAACTTATTTAACAGCGAACTTGGAAAATGGTGTGAAAT
AACGAAATGTAAACCACGGCATTGTCCAGGTATGGATGTTGTTGGGTCCA
CTATCTATGTTGTAGGTGGTTCACTGGAATGGAAACGAAAACGTACTGGA
GAGTATTACAACACTGAGAAAAATGAATGGATCCCAATGGCGGATATGCA
CACACCACGAAGTAATTTCGGTCTCGTCAATTTGGAAGGGAAACTGTATG
CTATCGGTGGTTATGATGGGAATTTCCCTTTAAAATCAGCAGAGGTTTAT
GATCCACGTACCAACCAATGGACGCAAATCTCCGACATGACGACGGCAAG
AGACGGCGCATGTAATGTGTCGGACGGCGAATCGATTTACGTGATTGGAG
GATACGACGGCCACGAATACAGACTGACGACAGAAGTTTATAAACCAGAA
ACTGGTCTATGGGATATCAGTTCTATTCCAGAGACATCAGTGCAACGTCA
GAACGCGATGTGTGTATACTTTGATTCGAGTATTTACATTATTGGTGGTT
ACCATGGAGATACTTATCATTCATCGATGGAAGTATTAGACCTGGAAACG
AACGAATGGTCTTTTTCAAGCCCCTTAAGTGCACCAAGACATCACGCAGG
CGCCGCTGCCATGAATGGAAACATTTACATTTGTGGTGGTTGGAGTGCAC
ATATTCCCGTCAGCCACGTTGACGTCTACTCTATCGCTCAAGATACGTGG
CGTCGCGTTTCGCCTCTTCCCACACCAACAATGATTCGCTCAGTAGCGGT
TAACTTCCCACGAAAATGCATCTTGAATTTATTCGCTAACTCAAACAGTG
ATATGGCGGCTTATCGTGCGTCAAGAATACGCTCCTTGCGTTCCATCTCG
GAGTCATCTTCTTCAGGTAATGAGAAAACACAAACAGAAGCTGAAGCTTT
TTTGACTTCCTCGACTGATGAGTAGAATCTTGATTTTGTGTTAATATTTA
TTTCATGCTTTGAGTATATATTACCCTTTCTAATCGGTCTCTTGAATCAA
GAAACTTGATGAAGCTTGGCAAAGTAAGTCTCTCAGTTCGcccatttttt
taacaatataGTGTAGCACCTAATATGGATACCATACTAGCAAATAGCAC
GAAATCATTAACTACCCAACAAGCAGTTTTAAGGTGCGTTTGAAAAATGT
CTTGGGTAAAAAGCTTCGAGGGATCTTATAACATTTATATTTCTTATGAA
CTTTCATTTTGTATTGTATATAATTTATTAAAATTGAAACGTTTTTATAc
aattaacatattttgaagtttaattttcttcaattttcgtTTTTGTAAAT
ACGATACCAAAAGTATCAGGgacaaatttcatttttggtgACAACTTTTA
TGAAGATTCTCCTGCATCGCCTGTTTTGTTTCTAGATGATCTTCAAAATG
ACAAAGCTCTTCTATAGCCGACCATTGTCCCCCCACCTCCAAAgcaaatt
ttcccaaaaattagtGTCTTTTCATTCCCTTTGCTTTTTTGTATTAATTT
TTTGCCTTTTGTAAAATAGAATATGATGAATATATTTTGTGTTACTTGAT
ATTCAAATAAGATTGACAGTATTAACTACTAAAGAA
Run BLAST on NCBI

transcript from alignment at scaffold_505:42034..54219+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069673 ID=TCONS_00069673|Name=TCONS_00069673|organism=Clytia hemisphaerica|type=transcript|length=12186bp|location=Sequence derived from alignment at scaffold_505:42034..54219+ (Clytia hemisphaerica)
TAATAATAAATGTTTGATAAGCCTTTTCATTGAACCGAGTTTCGTCTCTC AATATATGAGAATATATCAATCGAAAACTGTGAATGAAAATATGATCAGT TGATAAAAAACTCGCTGgagaaaacatcaaaaaatatatttctcagAAGA AAGAGATTGTCTATATATATTTTGGTGTGTTGAAAGGAAACGTTTCTgaa attttagttttgttttttttgtggggAAAGATGGCTGTTGAGAGAGCAGA GGAACTCCGGTTGTTTTGCCCGACCGAACCATTGGCCAAAATGATGAGAG GAGATGTAAGGTAAGGATGTTCCTTTATCATTATGGACATATGACTTGAT ATTTCTGGGATCTAAGGTTCTGACTTGATTTTTCCCGTTCGAGACCGTGT AGTGtctttcgctagcgattttacAGCAAAAGTTCGATTTGTTTTGGGCC TAGGATATAGTAGAAGCTTCTTTGTAAGCCTTCgactgaatttcaaaatt ctttccaaatttaagaaattctaataattatttctattttgggCCTCCTT ATTTCCGATAGCCTGAATAAGTCACGCACGATCTCACGAGACCGGCTTTT CGGTGATGAGAATACCGTAATTGGCCATCGTTTATCAAGGATTAATTTAC CATCTCATGCAACTATTCagtaaaagttttgatttttcaaagttcatttt tgactgGTGCCTAGGACTAAAGCTATTTTTGAAGTAATTTgcatcatcat cgtcatcgtcATATGTAACAATTTCGTAATTAGatgagattttttctttt atgcTGACTTTCTAATTACTATTAGCCAATAATGACCccttaaaaagatt ttgatgtttttgaaaaaagcagTATCACAGCCAGATTTAcaagtttttca tgttttcaatcCGATTCATAAATCTCTCGTTCATAGTCATCAAGCTTAGA AGTAGACAGGTCTTTAAAAATAATTGCGTcatgtttttgtgtttttacgG TCtgttcaaaactttaaaactacCCCTTTCTCGCAAACTACATTGATTTT CTGCCTTATCCCTTTGCTTTATAAGCATTAAATCATGAATACGTGATGTC TCGATCATTGCAATCCATAGACAATCATACCCTCAAACACTCCTCTGTGG TTGTCATGACGAACAATGTTTCATCTGTTTCTCAGAAATGTTGTTTTCCT TCTCAGTTCTCAGTTAACACACGGTCGAGATATGGAAAGAATTTCGATCA TATTTATATAGCAAATCATGATATGTGACCCTTTCAAGGTTTCAATTTTA CTGGGATTTCGAAGCAGTAACTCTTTAGTATCTGAAAACCTTCAGATTGC TCTTATAGCTCTCTCAGCtttgtttttgatttcccaGCTGGATTCTCTCA AAACACAGTGCCCTCtatcataaagaaaaaaattatcaatgcATAACAAC TTTCCCACTGCGTTTTCTGCAATAATCAATTCAACAGACTTTAAAACGAT CGATTCGAAAGGTCATTTCTAGCATAACATGTCACAAGCTATGGAACAAA TATTTCaggatcaaaataaaaaaatttgacttgTCTACCACCAGGTCCAG AACCTCTAGGTCCTTAAAATCAAACCCACCACATCACATTGGAGAAGCTT CGTCTTTCTCTTTAGATAGAAGTAAAGTTTGCCCCTCAAAtctatattga gaattccgcttattttaacgtttttcaagatttaaagttgcggcgagaaa gtcgattttgggctatctctttcatttaatcgaatatttcaatttgggag gggttggcagacttccaagctatattctgagccttctTGGactatttttg gatttttgggtcctcagatcctaaggtccttcctaagtcttaagtctagc gttaaaaatCAGAGTTGAAATTCTGCCCTTCGAACCTACCCCCGGGGGgt tactaggtttgcgaggtgacgggtatgtccgagccgaaaatcgaaaattt tgagagacaaaattttggtgattttgggaccctttgagagactttttcct aaattttgatccattttttccaaattttggtttgattttcaccaaatNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTtacaacttatcaagttt taattgctagcaaactcgtaaaaaagtttgataacctaacgaggagtgtt ttctatgagttcttaatccacctattctaatccgttggtgTAAGTAACTT ATTTCAGGCGATCAATGTTTTTTCTTGGAAGGATTTTATCTTCTCCTCAT CGTGTGCTCGATAAGTTAATAGAGCAGTATTATATTCATATTAAGATTGT TCATTAAAGGTTTGCGTGGAAGCGCCAAAAAAGTCCTGAGTTTTAAATCA GATTTTATGTCACCTTATTATAGGGGTTTCTTCGAATTTGGATACCCCTA TGGATAGCGGCAGCTTTAGTTTTAATCTTTAGGTTTCCTTataaaagttt gtgtgtgtttgAGGAACTAGCTCGTTTTCTTTCCTATTCATTCTTTAAAA GCTAtggtttacacgtttttttttttaagaaactagttttaccaagcagc ctcaatgtttcttaagaaatcggccttttgagtcttaaatgtttcttaca tgtttcNgcctcaatgtttcttaagaaatcggccttttgagccttaaatg tttcttacatgtttctaaactttttgacataatcagccttataaaaggct ggattggaaggttcttaaaaaaacgaattaaagaatgtttttttttcctt ctcagcctcagcatgtttcttagatgtttcttagtttttagacattctga gcctcatgtttcttaaaagtgtgtttcttaaaaaaaaaaacgtgtattct ttatgattcttCAGGTCGAAGGAGGATTCCTTCAAATTCACCATGACGCA ACTTCAACAACGTCATCCGTCCGTCACTAAACCGTTCCAAGAAGAATTCG TCGACGTTAACATCAAAAATGGATTCTTCGACGCTGCCAACAAAATGAGA CGACAaggtatttgattttttctcaCTCCGTTCAGAGGGATTCAAACACG TTTATAGCAACGAAATCAACCTTTACCCTGATCTAGGGTACGTCATTATT TTCTTTTGCCGCGAGCATAAAACACCTCTAATAAGTACCTTTTAACTAAA GATCTTCTATATATGTTATCGCACTGCCCTTTGGTCAAAATCTTTCGGCA TCTGTTAGACCTAGAAATCTAGCTTCAGTGTATACCCCAATGTTAAGTTT TCCAAGCGttgaatatatatatatactatAAGAGTATCTTAGCCAGTATT CTTACGATTTCTTCCCATTTCTTTCTCAGGTGTTTTGACAGACGTATCGC TAGTTGTTGATCAACAAACCTTTCACACTCATAAACTGATATTATGTTCA TGCAGTGATTATTTTACTAGCATGTTTAACGGTCCTTTGGCGCATCACGG CCAACAAGTCTTCATATCGGGCGTCAGTGCCCAAAGCATGGAAGCTATTT TGAATTACGTTTATACGGGATCGATTATCATCAACGAGGAGTTTATACAA GACATTTTAGAAGCAGCTtgtttgtttctattgaaaaactTACGCGAACG ATGCGCGCGATTTCTGCGCGACCGATTAGATGGTGGCAATTGTTTACAGA TTTTCAGTATCGCTAAAAGTTGTTCATTGTTGGCTTTGATGGAGGATTCC CTAGAGTTCATCTCCGCGATCTTTCAAGATATTTCAGCGCTGAATGATTT TAAACAATTAAGTTTTGATGAACTTATTGATGTATTATCTCTTGAAGATT TAGCAGTGCCAAGTGAAGATTACGTTTTAGAGGCAGCATTTCGATGGTTA AATCATGATTTATAcggacgtcagcaaaaatttgtaGAAGTGCTAAAAGC TATACATTTACCATACGTTAGTGACGATATGTTAAAACAGGTCATGGAGA ATGAAAAATCTTTACGTACTTTTCCTGAGCTGGAAATTCTCTTCCGTTCC GCCTTACGTCTTACCGTTGAAAACTGGACTCTCTCCAAAGACAGTGATTT TAATTTACTCCAACCAAAATCATGGATAAATCCACGAAAATGTATTCAAT GTATACCGAGTCTTATCGCTATGGGTGGGCCTACATTGAACTTATTTAAC AGCGAACTTGGAAAATGGTGTGAAATAACGAAATGTAAACCACGGCATTG TCCAGGTATGGATGTTGTTGGGTCCACTATCTATGTTGTAGGTGGTTCAC TGGAATGGAAACGAAAACGTACTGGAGAGTATTACAACACTGAGAAAAAT GAATGGATCCCAATGGCGGATATGCACACACCACGAAGTAATTTCGGTCT CGTCAATTTGGAAGGGAAACTGTATGCTATCGGTGGTTATGATGGGAATT TCCCTTTAAAGTAAGCTTGATAAAATCTCCTTTTTACTTCACTGTACTAT AAAACTTGAGCCTAATTTTGGTTGTAAAATAATTCGGTCTACTAGGTAGC TCTTGCAGCTCATGTTTGCAAATTGGATTCTACAACAATTAGTATTTCCA ATGAGCTAAACTTAGGCGAATTAAATTGAACAGTCATGTGAACTTACTTT TGTTCCATCAGATCAGCAGAGGTTTATGATCCACGTACCAACCAATGGAC GCAAATCTCCGACATGACGACGGCAAGAGACGGCGCATGTAATGTGTCGG ACGGCGAATCGATTTACGTGATTGGAGGATACGACGGCCACGAATACAGA CTGACGACAGAAGTTTATAAACCAGAAACTGGTCTATGGGATATCAGTTG TAAGTTGCGACATCCTCCcctatttttttctattttaagtCAACTCACTC CTTTTAATTCGAATcattttaactaaaacattggatcttgagctttaaat atgTATACTATATTCaagcttagttaactaggcctGTATTTACAAGACTA AGACATTATGGACGTTGAAGTTTGCCTTCTAGGCTACACTAGAATCTGCG TAAAAATATATggaggatttttttatttcctcgttttttgAAGTTCGgtc gagaaagtcgcttttggtcTTTTTCTTAAATGTAGGGGTTTATAAACTTC CAGGCAATATTCTGAGTCTTGTTGGGCCACTATTAaacttttgaatcctc agatcctaaggacCTAATCTAAGTCTAGCGTAAAAACACTACCGTTCCAA CCAAAGTTAGcccgcttccaaatcgtttgtggctactataagatttcgtg ggattttccctttttttctcaaatacatGTATTACGATCTTGATTGTATA TCCTCCGTAATTGACGTAATTCTGAATGTTGTGAAAGAGTTAACTTACAT GAAAACTCCATTTGGTTTATCAGCTATTCCAGAGACATCAGTGCAACGTC AGAACGCGATGTGTGTATACTTTGATTCGAGTATTTACATTATTGGTGGT TACCATGGAGATACTTATCATTCATCGATGGAAGTATTAGACCTGGAAAC GAACGAATGGTCTTTTTCAAGCCCCTTAAGTGCACCAAGACATCACGCAG GCGCCGCTGCCATGAATGGGTAAGTCGTGTTTGATTCTTTATGAATGTTT ACTTCAGTATCTATCAGCATCATATTGTCCTTTAAGTTATTGCTTAATTT TTAGAGAAATTGTATTCTACTTTTCCACAAAGGACCTTTCTTGCATCtaa tgtttcattttcaaagcgTATGCTtaatttatcgttctttaaacCGTTAG TGCTTAACCTCTGTAATGTACAAAAAGGAATGAAATCGCTGGGATGGTTT CACTACTACGGTTCGGGGGTTGGGATGGCTAAATTAGTCGTTCTTTATTg ttttgaattcaatttttcgttgatgagaattttttttttcttctttctga aaGAAAGAgtaaattttaaattcaaaaccaCAGAATTCACAATCTTGCTT GGTTTCTGTATGAAATAGAATTTGCCATGTacgatatttttgacatttcg tTGTGATTTACAACATATAATTTCCTCAAGGTTTCTTAACATGAATCTAT TCTTCTCTTTTTCTGCAGAAACATTTACATTTGTGGTGGTTGGAGTGCAC ATATTCCCGTCAGCCACGTTGACGTCTACTCTATCGCTCAAGATACGTGG CGTCGCGTTTCGCCTCTTCCCACACCAACAATGATTCGCTCAGTAGCGGT TAACTTCCCACGAAAATGCATCTTGAATTTATTCGCTAACTCAAACAGTG ATATGGCGGCTTATCGTGCGTCAAGAATACGCTCCTTGCGTTCCATCTCG GAGTCATCTTCTTCAGGTAATGAGAAAACACAAACAGAAGCTGAAGCTTT TTTGACTTCCTCGACTGATGAGTAGAATCTTGATTTTGTGTTAATATTTA TTTCATGCTTTGAGTATATATTACCCTTTCTAATCGGTCTCTTGAATCAA GAAACTTGATGAAGCTTGGCAAAGTAAGTCTCTCAGTTCGcccatttttt taacaatataGTGTAGCACCTAATATGGATACCATACTAGCAAATAGCAC GAAATCATTAACTACCCAACAAGCAGTTTTAAGGTGCGTTTGAAAAATGT CTTGGGTAAAAAGCTTCGAGGGATCTTATAACATTTATATTTCTTATGAA CTTTCATTTTGTATTGTATATAATTTATTAAAATTGAAACGTTTTTATAc aattaacatattttgaagtttaattttcttcaattttcgtTTTTGTAAAT ACGATACCAAAAGTATCAGGgacaaatttcatttttggtgACAACTTTTA TGAAGATTCTCCTGCATCGCCTGTTTTGTTTCTAGATGATCTTCAAAATG ACAAAGCTCTTCTATAGCCGACCATTGTCCCCCCACCTCCAAAgcaaatt ttcccaaaaattagtGTCTTTTCATTCCCTTTGCTTTTTTGTATTAATTT TTTGCCTTTTGTAAAATAGAATATGATGAATATATTTTGTGTTACTTGAT ATTCAAATAAGATTGACAGTATTAACTACTAAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043382XLOC_043382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069673-exon-scaffold_505-1491911889:42034..42343TCONS_00069673-exon-scaffold_505-1491911889:42034..42343Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1510915933:42034..42343TCONS_00069673-exon-scaffold_505-1510915933:42034..42343Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1575043694:42034..42343TCONS_00069673-exon-scaffold_505-1575043694:42034..42343Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1491911889:50048..50190TCONS_00069673-exon-scaffold_505-1491911889:50048..50190Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1510915933:50048..50190TCONS_00069673-exon-scaffold_505-1510915933:50048..50190Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1575043694:50048..50190TCONS_00069673-exon-scaffold_505-1575043694:50048..50190Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1491911889:50513..51593TCONS_00069673-exon-scaffold_505-1491911889:50513..51593Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1510915933:50513..51593TCONS_00069673-exon-scaffold_505-1510915933:50513..51593Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1575043694:50513..51593TCONS_00069673-exon-scaffold_505-1575043694:50513..51593Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1491911889:51795..51982TCONS_00069673-exon-scaffold_505-1491911889:51795..51982Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1510915933:51795..51982TCONS_00069673-exon-scaffold_505-1510915933:51795..51982Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1575043694:51795..51982TCONS_00069673-exon-scaffold_505-1575043694:51795..51982Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1491911889:52557..52752TCONS_00069673-exon-scaffold_505-1491911889:52557..52752Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1510915933:52557..52752TCONS_00069673-exon-scaffold_505-1510915933:52557..52752Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1575043694:52557..52752TCONS_00069673-exon-scaffold_505-1575043694:52557..52752Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1491911889:53252..54219TCONS_00069673-exon-scaffold_505-1491911889:53252..54219Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1510915933:53252..54219TCONS_00069673-exon-scaffold_505-1510915933:53252..54219Clytia hemisphaericaexon
TCONS_00069673-exon-scaffold_505-1575043694:53252..54219TCONS_00069673-exon-scaffold_505-1575043694:53252..54219Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_505supercontigscaffold_505:42034..54219 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.670508 0.277189 1.02477 0.770485 2.39105 0.918496 3.29601 2.17004 3.17994 4.11517 1.01501 1.00603 14.5358 5.80507 6.31807 5.06436 25.2177 22.5174 10.9062 15.2344 9.57891 9.05471 20.0202 24.8844 12.1485 10.0536
Blast
BLAST of TCONS_00069673 vs. Swiss-Prot (Human)
Match: KLH17 (Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.502e-77
Identity = 170/578 (29.41%), Postives = 279/578 (48.27%), Query Frame = 3
Query:  423 FDAANKMRRQGVLTDVSLVVDQQTFHTHKLILCSCSDYFTSMFNGPLAHHGQ-QVFISGVSAQSMEAILNYVYTGSIIINEEFIQDILEAACLFLLKNLRERCARFLRDRLDGGNCLQIFSIAKSCSLLALMEDSLEFISAIFQDISALNDFKQLSFDELIDVLSLEDLAVPSEDYVLEAAFRWLNHDLYGRQQKFVEVLKAIHLPYVSDDMLKQVMENEKSLRTFPELEILFRSALRLTVENWTLSKDSDFNLLQPK------SWINPRKCIQCIPSLIAMGGPTL-------NLFNSELGKWCEITKCKPRHCP-GMDVVGSTIYVVGGSLEWKRKRTGEYYNTEKNEWIPMADMHTPRSNFGLVNLEGKLYAIGGYDGNFPLKSAEVYDPRTNQWTQISDMTTARDGACNVSDGESIYVIGGYDGHEYRLTTEVYKPETGLWDISSIPETSVQRQNAMCVYFDSSIYIIGGYHGDTYHSSMEVLDLETNEWSFSSPLSAPRHHAGAAAMNGNIYICGGWSAHIPVSHVDVYSIAQDTWRRVSPLPTPTMIRSVAV----NFPRKCILNLFANSNS 2099
            F A ++MR++G+L D+ L V  +    HK++L SCS YF +MF   ++   Q  V +  +  Q+++ ++ + YT  I++ E  +Q +L AA L  L  +R+ C +FL  +LD  NCL I   A + S   L++ +  ++   F D++   +F  L   ++++++S + L VPSE+ V  A   W+ HD+  R+Q    ++K + LP +S D L   ++ E  +R  P+ + L   AL+             F+LL  +      S   PR+C    P L A+GG +L         +++   +W  +     R    G+  VG+ +Y VGG        T E Y+   N W P   M T RS  G+  L G LY+ GGYDG   L SAE YDP T  WT ++ M+T R      +   ++Y +GGYD   +  T E Y+P+  +W  S +     +R +A     + ++Y+ GG  G +  +S+E    +   W   +P++  R      AM+G +Y  GG      ++ ++ Y+   + W   S + T      VAV    NFP      L  +S S
Sbjct:   79 FVAMSRMRQRGLLCDIVLHVAAKEIRAHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDPQALDQLVQFAYTAEIVVGEGNVQTLLPAASLLQLNGVRDACCKFLLSQLDPSNCLGIRGFADAHSCSDLLKAAHRYVLQHFVDVAKTEEFMLLPLKQVLELVSSDSLNVPSEEEVYRAVLSWVKHDVDARRQHVPRLMKCVRLPLLSRDFLLGHVDAESLVRHHPDCKDLLIEALK-------------FHLLPEQRGVLGTSRTRPRRCEGAGPVLFAVGGGSLFAIHGDCEAYDTRTDRWHVVASMSTRRARVGVAAVGNRLYAVGGYDGTSDLATVESYDPVTNTWQPEVSMGTRRSCLGVAALHGLLYSAGGYDGASCLNSAERYDPLTGTWTSVAAMSTRRRYVRVATLDGNLYAVGGYDSSSHLATVEKYEPQVNVW--SPVASMLSRRSSAGVAVLEGALYVAGGNDGTSCLNSVERYSPKAGAWESVAPMNIRRSTHDLVAMDGWLYAVGGNDGSSSLNSIEKYNPRTNKWVAASCMFTRRSSVGVAVLELLNFPPPSSPTLSVSSTS 641          
The following BLAST results are available for this feature:
BLAST of TCONS_00069673 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH171.502e-7729.41Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE... [more]
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