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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069579 ID=TCONS_00069579|Name=TCONS_00069579|organism=Clytia hemisphaerica|type=transcript|length=525bp
CCGCGCGCCATAGGACTCTCTTATTAATGGAGATGTAATCATAAATTCTA
TCCGCAAAATCTTGACAATTATCGTTCAACCAattatatcttttacccag
ttCGCGTTTCTTGAACAAGTAATCGAAAAGGTTTTTCAATCTCAGGTCGC
TCCATTGATGCTTATAGAACAGGTCTTTTTTTACCATGCAAATATTCTTT
AACGTTATTACCAACCTTGCTACGCTGTAGGACCAACTCATCTGCATTTT
TCTCGAGTgaccaaaaataatcatttgtTTCTAAAACAATATATGCATGA
TAAAGAAGCGCATGAGTAAGTTGCCAGCCACTTAGTGGAGTTGTGTACAA
CCAGACTTCCTTTATATTCTCTTCAACATCCACCAAGCTTGCCAACTTTG
ATTGAAGCTCATCGTGCGACAGATTGATTCCCTCATCTTTTCCTACTTTT
GCATCAGGGTTGAAATAAAGCTTTCCTTTCCATTCACCTCCCTTCTTTTT
TTTGGATGGGCTCATTTTATCtctg Run BLAST on NCBI transcript from alignment at scaffold_502:154779..157160- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069579 ID=TCONS_00069579|Name=TCONS_00069579|organism=Clytia hemisphaerica|type=transcript|length=2382bp|location=Sequence derived from alignment at scaffold_502:154779..157160- (Clytia hemisphaerica)
CCGCGCGCCATAGGACTCTCTTATTAATGGAGATGTAATCATAAATTCTA
TCCGCAAAATCTTGACAATTATCGTTCAACCAATTATATCTTTTACCCAG
TTCGCGTTTCTTGAACAAGTAATCGAAAAGGTTTTTTAAGCTCAGATCGC
TCCATTGATGCTTGTGTGTAGATGGCTTAGAGCGACCCAAAAGTAAAGGT
CTTTTCTGACCACGACAATAATCTTTAACACTATTGGGATTTTTACTACG
TTGCAGGTCTAGCCCTTTTACATTCTTTTCGAGAGACCAAAAGTGTTTAT
TGGTTTCCAAAACAACATAAGAATGATAAAATAATGCATGAGTAAGTTGC
CAGCCACTTAGTGGAGTTGTGTACAACCAGACTTCCTTTATATTCTCTTC
AACATCCACCAAGCTTGCCAACTTTGATTGAAGCTCATCGTGCGACAGAT
AAAATCCTTTATTTTCCCCTTCATCAGCATCAGGGTTGAAATATAGACTG
CTTCGCCAATACATTCCTTTCTTTACCATTTTAACCTTNATAAAATCCTT
TATTTTCATCAGCATCAGGGTTGAAATATAGACTGCTTTGCCAATACATT
CCTTTCATCTTTGCCATTTTAACCTTGAAATGAAAGAAATATATACTAGA
TGTCATGTACATTAAATTATTCCTTAAAAGTTCACAGTAATTCTGTAGCC
CTAAAGAGCAAGTACAATCATGGTCGAAATCTATTGAGAATTAAGCTTTC
ATTTGAAACATAAGAATTATGTTTTTTCTCGGTTTGTTCGTCGTGAACAA
CTTTTAAACCTGATTCAAGATTGTTTGCGATCAGGCGTTTGGCTATCAAA
CATGCAGATTTGAGTCTTTCTGATAGTTTACATTGTTTCGTTAGTTGTAA
ACATCCTAAGGGTATTTAGTTTTTTCCTTGGTGTTCCATGCTATTATATC
TGGTATTCAAATGTTGGCCTACTGACATTCACCCTGACATTCACCCACTC
TAAAGCTCTGAAGAAGTGGGTGGATATTCGATCTAAGAGGACTCCAGTTG
ATGTGTTTCGCCGACGGTCTGTTCCAGCTTTCCTTCCTTCGACATACTGG
AAATATTGATGCTTGACCATTCTTATAAAAAGTGTGTAGCTTATTTTGTA
GTTAAGGAAGATATGTCCTATAATCTGGTTCAAATTGGATACCACATTCT
TTTTTATCGTTTCCACTTTTCTCGTAACGAATTTTCATTTTTCAACGAAT
TAAAATCGAAGGGATTATCCATGTATCCTAATTGTAAAAACTCAGCACTT
CTAGAAGTAATTGCTTCATCTTTCTTTTGTAGAAAAAATCTTGTGACCTC
AGATCAGAACTCTCAAAATTTCGCCAAAATAAGTAAACAATTAGTATCCT
TCGTATCAAATCATTGGTTTGTTCCTTTCTGCCGGCTAATGGTCTTCAAA
AATTATGGTAATTTTCATGTATTTGAGACATGCCATAACTTATGTGAGTG
CAGGCGAAAGTTTCGGTCTAAGAAAAGTCAAACAGCTTAAGGAGGAGGTC
TTAAAAAGGTCAAAGGTAGACAAGGAACATTTGAAACCTATTTAAACCCT
CTAGAATCCTCTACCCCCCTAGTAGATACTTTCTGACCACTCCCTAAGGT
TATTCTTTATCTTTATATTGTAACCTAGCGACAGATTTAACACTCAGAAT
CTTCAGTTTTTAGCTTTATATTTTCCGATTATAAAGAAGAATTGTATAAA
ATTAGCCAAAAAAATCAAAACTTTCTATCGAATAATGTTAACATAATGAT
ATCTATTGTGAATCTTTTTGCATCATACTCATTTATATCTGTGAGAAGGT
CCAAAATAGCCTTGGTTCGGGTCTCTCTTATTATTGGAGATATAATCATA
AATTCTATCCGCAAAATCTTGACAATTATCGTTCAACCAATTATACGTTT
TACTCAGTTCGCCTTTCTTGAACAAGTGATCAAAAAGGTTTTTCAATCTC
AGGTCGCTCCATTGATGCTTATAGAACAGGTCTTTTTTTACCATGCAAAT
ATTCTTTAACGTTATTACCAACCTTGCTACGCTGTAGGACCAACTCATCT
GCATTTTTCTCGAGTGACCAAAAATAATCATTTGTTTCTAAAACAATATA
TGCATGATAAAGAAGCGCATGAGTAAGTTGCCAGCCACTTAGTGGAGTTG
TGTACAACCAGACTTCCTTTATATTCTCTTCAACATCCACCAAGCTTGCC
AACTTTGATTGAAGCTCATCGTGCGACAGATTGATTCCCTCATCTTTTCC
TACTTTTGCATCAGGGTTGAAATAAAGCTTTCCTTTCCATTCACCTCCCT
TCTTTTTTTTGGATGGGCTCATTTTATCTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069579-exon-scaffold_502-1575043694:157031..157160 | TCONS_00069579-exon-scaffold_502-1575043694:157031..157160 | Clytia hemisphaerica | exon |
| TCONS_00069579-exon-scaffold_502-1575043694:154779..155173 | TCONS_00069579-exon-scaffold_502-1575043694:154779..155173 | Clytia hemisphaerica | exon |
| TCONS_00069579-exon-scaffold_502-1510915933:157031..157160 | TCONS_00069579-exon-scaffold_502-1510915933:157031..157160 | Clytia hemisphaerica | exon |
| TCONS_00069579-exon-scaffold_502-1510915933:154779..155173 | TCONS_00069579-exon-scaffold_502-1510915933:154779..155173 | Clytia hemisphaerica | exon |
| TCONS_00069579-exon-scaffold_502-1491911889:157031..157160 | TCONS_00069579-exon-scaffold_502-1491911889:157031..157160 | Clytia hemisphaerica | exon |
| TCONS_00069579-exon-scaffold_502-1491911889:154779..155173 | TCONS_00069579-exon-scaffold_502-1491911889:154779..155173 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_502 | supercontig | scaffold_502:154779..157160 - |
Blast
The following BLAST results are available for this feature:
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