TCONS_00069157 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069157
Unique NameTCONS_00069157
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1924

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069157 ID=TCONS_00069157|Name=TCONS_00069157|organism=Clytia hemisphaerica|type=transcript|length=1924bp
ATTTAAACTAAGAAGACGAGAAGAGAGTTGCTGAGATATTTATTAAGAAT
CATTTCTTGAACTTTGttcttttttctacaaaaacatGCtagatttATGT
ATCGACCCAAATTCGGATCGATTAAATTCAGAAATGTACTGAATCTAGAC
TTGACGGAGGATTAGATAATGATGTCGTACGGCTAGTTAACAGGAATaat
taaaaaacattaaaaacccTTTGTAAAGCTCACccaagaaataaaaacaa
ttttaaccaAGGCTTTAAGAATATGGGGAGAGAAATTAGATTCacaattt
gtttcattttgatatttttgtcaaCAATACAATCAAACCtggatccaagc
cacgatatcAACACAATCAATACCACAAGTGAAATTCTTTATGGAGTACC
TTGTCATAAAGATATTGGTAAATCGTCTGCCGTGAATTTCAACCATAATT
CAGAACGccagattttcaaaaaggataaaaaGTACACATCTTCACAATGG
GTTATGCAACTTCGTCTATCAAGCATTAACACTGTGGTCAACTCAATGCT
GGTCATTGATAACAGCACCGTCATTGAAATGTTTCTTGAtaAATACAGAG
TCACCTCTCTGACCAACACAACTGTAACCACAAGTAAATTGCAATCCATC
TTCTCACACATTTATGACATCTCAATAACATGTGCATCATCAACTATCAA
TGAAATCGCTGTAAAGGTTCAACTAATTGACACCAAAATTATTGGCGTTA
ACCATAAACATATCCaaccaaaaaacgaGCATTTCCTTCACACAAGCCCG
ATCGGGTACTTCACATCATTTTATTATCCGTTTGGATACAAATATGGCAG
CCGAGTAGTGcacaaaatcaaaacttttggaaaacACAAGATAATTCACA
TCCATTTTATGGACGTTCAAATGACACAATATGGATTTGTTTGTAGCAGC
CATGATGATAATCTAAGGATTAGAGGAAGCGATCAACTTGATGAGAGGTT
TGAATATGCAGATACAGTCGGTTATACTTTAATGTGTCATTTCGATACAC
CATACTCGATTGAGGTCTCCGGCTACGAATATATCTTTATACAGTTCAAT
GCACTGCATTCAACCATCGCGCATCGTGGGTACGCAATTGGTTATGAAAT
AAAGGATGATGTTTCAAAGACAAATCCAGAAGTCTCAAAAGCCCGTATCA
TAATGGCGACCATTGTCGGTATAGTATTCGGTATGTGTTTGAGTACCGCT
GTTATAGTGATTGTATTATACCGGAAAAGAAAACGGAAAGTGCCAGAAGA
TCCGGAAGAGATGTCAAAACATACGGAAGACGAGCTTAGTGGAGATAATa
cgaaaaatgatgaaaattataGTTCCAATACAGGAGATGAAGACTCAAGG
CAATCTGTTGATATATGTGAAGGTGGAACTTCAAGAGATTTTGGTGCACT
TAACGGATTGAATTTAGAACATTTACAAAGATTAAATAAATTGTTTAGTT
CAACTGTTGCAGCGGACGGTGAGGGACAAAAGGAAAGTAAAGATGAAGCA
AATGAAAAGGATAACTCATCTCaaaatgatgatgaaatacGCTGTGAAAG
TCAGTTTCAGTCGAGATGGggtttttataagatgctttgatAATTGgtga
taattggtcatttgaagtaataaaatgacacgttctttagaaaaaaggaa
caagattgttttattactggttaacgaccaactaaattaaataagagctt
gtaaactNgcctgccccaaagttttagcctcgttttggcgaaaactcgtg
accacacccttaaaaatgaaaattttcaaaaaatgaaaaaaacatccgca
gatattcacccaaggaacaagtgtgccatttatatgaacaaactataagg
tttcgatggctaaaaaatcaaaat
Run BLAST on NCBI

protein sequence of TCONS_00069157-protein

>TCONS_00069157-protein ID=TCONS_00069157-protein|Name=TCONS_00069157-protein|organism=Clytia hemisphaerica|type=polypeptide|length=455bp
MGREIRFTICFILIFLSTIQSNLDPSHDINTINTTSEILYGVPCHKDIGK
SSAVNFNHNSERQIFKKDKKYTSSQWVMQLRLSSINTVVNSMLVIDNSTV
IEMFLDKYRVTSLTNTTVTTSKLQSIFSHIYDISITCASSTINEIAVKVQ
LIDTKIIGVNHKHIQPKNEHFLHTSPIGYFTSFYYPFGYKYGSRVVHKIK
TFGKHKIIHIHFMDVQMTQYGFVCSSHDDNLRIRGSDQLDERFEYADTVG
YTLMCHFDTPYSIEVSGYEYIFIQFNALHSTIAHRGYAIGYEIKDDVSKT
NPEVSKARIIMATIVGIVFGMCLSTAVIVIVLYRKRKRKVPEDPEEMSKH
TEDELSGDNTKNDENYSSNTGDEDSRQSVDICEGGTSRDFGALNGLNLEH
LQRLNKLFSSTVAADGEGQKESKDEANEKDNSSQNDDEIRCESQFQSRWG
FYKML
Run BLAST on NCBI

transcript from alignment at scaffold_495:172385..176837+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069157 ID=TCONS_00069157|Name=TCONS_00069157|organism=Clytia hemisphaerica|type=transcript|length=4453bp|location=Sequence derived from alignment at scaffold_495:172385..176837+ (Clytia hemisphaerica)
ATTTAAACTAAGAAGACGAGAAGAGAGTTGCTGAGATATTTATTAAGAAT CATTTCTTGAACTTTGttcttttttctacaaaaacatGCtagatttATGT ATCGACCCAAATTCGGATCGATTAAATTCAGAAATGTACTGAATCTAGAC TTGACGGAGGATTAGATAATGATGTCGTACGGCTAGTTAACAGGAATaat taaaaaacattaaaaacccTTTGTAAAGCTCACccaagaaataaaaacaa ttttaaccaAGGCTTTAAGAATATGGGGAGAGAAATTAGATTCacaattt gtttcattttgatatttttgtcaaCAATACAATCAAACCtggatccaagc cacgatatcAACACAATCAATACCACAAGTGAAATTCTTTATGGAGTACC TTGTCATAAAGATATTGGTAAATCGTCTGCCGTGAATTTCAACCATAATT CAGAACGccagattttcaaaaaggataaaaagtaatttgatttttttgtt actgtccccatctttgctgaaaacatatttttgtttgaaTGCATTCATTA CATGTTAAATTTAGGTGAATtttggatcctaacctaaaAAAAAGATTAGN TATTTTTGTGTTTGAATGCATTCATTACATGTTAAATTATGAATTTTGGA TCCTAACCTGAAAAAATCTTCTCTGGTCACAAATATTTGACATTCATTGG TCTGTAATAATATTCGTTGTTTTACTATTAAGGTACACATCTTCACAATG GGTTATGCAACTTCGTCTATCAAGCATTAACACTGTGGTCAACTCAATGC TGGTCATTGATAACAGCACCGTCATTGAAATGTTTCTTGAGTAAGCTTAC TTTACTTTATTTGATATGCCCAAAAAATAGAAGTAAATAAAATAAAGGCT AATTTCAAATTGTTAATCTAAATGAGAAGTCgcgggaattaaattttgcg aatttaaGGGGTTTcattagcgagcacctcaccaaaaaccagcatttttc actttttcagttccactttgatgattttcgagaaaaaaatgtacttttca aatattttttttgacgCAGATTCGATTTTTCCCTACTGCAAGAGCTTCGG AAGTTTAGAATGACGTCAAAAATCGAGTATTAGAAGCATTTGAAAAGgcc gcaaagtggaatagacgtgtTACTGCGTagaatgcgtgaatgcgtaaatg ggctttttcacttgcttgaatgcgtgaaaataaaTGTATCAGATAAGGTT TCATATAAGAAGTACGAATAAGGTCTATCCAAGAAATAAAAAACAGTCAA CAATTAACAATCACAGTTTGGCGGTGAAAGTCCAAATCATTTAATGCGAT agtcattttcttatttttcagtaAATACAGAGTCACCTCTCTGACCAACA CAACTGTAACCACAAGTAAATTGCAATCCATCTTCTCACACATTTATGAC ATCTCAATAACATGTGCATCATCAACTATCAATGAAATCGCTGTAAAGGT TCAACTAATTGACACCAAAATTATTGGCGTTAACCATAAACATATCCaac caaaaaagtaaaaacgttTTTCATATATACTATTAACGCTCTCTGATTCG TTTTTCAAGgcgaattggattttcatcgaataagggaggaTATTGAATAG TacagcgtcgtttatgagagtttctcgtTGACGGTAACTTTAATCACCGA AAATAATGAAGTGTATTGAAAAGTAGAACATCGAATAAGAGAGTGTCAAc tataatataacaatagcgttcagtttgaggtcgttgttgttattttctgc ccgcgtagTTTGATTATTCGCCCGAAAGTGTCTTTTCGCAAATGGCACAA GAAATTTCACAAGAAATGGCACAAGAAATTTCAGtttcgtattcttatga aattgttcttataaaaaacgtgtaagacaaggcacggatgtcactctaag tagactgtaaatcactcccttgtcacatttgttagcatttgaaagaattt tgtctcagatgagaggccactcttaacaaaaattactgtagggctatcat tccttttgaacgcaaattcaactctatgtgttcgttttgatgcggtggca ccttaatggaAGTTATGGCTAGTAATAGCATTTAATTCGTCAAAAAGAag gaaaatattgaacaaaCAATTTCTTTGTGGCACTTACATTAATTAGAAGG TGAAATTCCTTANAACAAACTATTTCTTTGTGGTGGCACTTACAGTAATT AGAAGGTGAAATTCCTtgtcttttttaattcaaaagttCGATTCTTTGAA GTCACTGTCCAAGTTTCcgtattaatttttttttcagcgaGCATTTCCTT CACACAAGCCCGATCGGGTACTTCACATCATTTTATTATCCGTTTGGATA CAAATATGGCAGCCGAGTAGTGcacaaaatcaaaacttttggaaaacACA AGATAATTCACATCCATTTTATGGACGTTCAAATGACACAATATGGATTT GTTTGTAGCAGCCATGATGATAATCTAAGGATTAGAGGTTGGTTAACTAA GGTTACTATTCTAGACgtcagaatctcaaaatattattttcaattattgA AGTAAATGTAATGACTTCGTTGATCCGatcatttttcacaaatttttgcc atCTTTGCGAAAATAAATCTCGCGAAATTGTACGGAGAAGTTTCTACCAA GAAACCATATTATGAGTTTTTAAGTTGGCATTATGCTGGAAAAAGACATA TATTTTAGCaatgaacggataataaaccatttactTGAACTCAGTCTCAT GCAATATGAAATAAATTAGGCTTCGAACGCACGCAGGCCAAATATTTTTG CGCATTATATTCGACCCgctccaataattttttattagttGCAGTATAAG CTTTCCGTCAAGTAAAGATATCTCTTGCTGAATTTCATCACTTGTGTAGG AATTTGTCCGACTTCAAGACGTCAAAAACAGCATGAATGTTATTTCCGTG GATTACGTGGGAGCAGTAAGGTTGTGTTTTTATCACAGCCCAAACAAAAC CAATgtgtaaaaaattgaattatgaaATCCTATCAATTATCAACAGGCTT TTTCGATCTTTTCTAGGAAGCGATCAACTTGATGAGAGGTTTGAATATGC AGATACAGTCGGTTATACTTTAATGTGTCATTTCGATACACCATACTCGA TTGAGGTCTCCGGCTACGAATATATCTTTATACAGTTCAATGCACTGCAT TCAACCATCGCGCATCGTGGGTACGCAATTGGTTATGAAATAAAGGATGG TATGCTTAaagcttttatattttttatttaggcCGTATTGcatagaatat ttttttaggttttggaTCCCGAGATCTCAAAAGACTTGAGTCTaatgttg aaaatcaaaattgaattttacaCCCCAGAAGTAAATTAAagcaattaaaa aattttaccaGGAATTTCCCTTCTATCAAATATTATGTCTTTGATTGTAT TACGAGCTTGTAAGTACAGCTGACCCTCTCTAATTCGTCGATACGCTCCC TCATTCGATAGAATTTAAAGCCCTAGTCATCAAGGGTCTCTCGTAAACGa tattctattattcgataagctcctttattcgatgaaaatccaattcccct tgaagatcttgaaaaattcttctttctCATATTAAAGATGTTTCAAAGAC AAATCCAGAAGTCTCAAAAGCCCGTATCATAATGGCGACCATTGTCGGTA TAGTATTCGGTATGTGTTTGAGTACCGCTGTTATAGTGATTGTATTATAC CGGAAAAGAAAACGGAAAGTGCCAGAAGATCCGGAAGAGATGTCAAAACA TACGGAAGACGAGCTTAGTGGAGATAATacgaaaaatgatgaaaattata GTTCCAATACAGGAGATGAAGACTCAAGGCAATCTGTTGATATATGTGAA GGTGGAACTTCAAGAGATTTTGGTGCACTTAACGGATTGAATTTAGAACA TTTACAAAGATTAAATAAATTGTTTAGTTCAACTGTTGCAGCGGACGGTG AGGGACAAAAGGAAAGTAAAGATGAAGCAAATGAAAAGGATAACTCATCT CaaaatgatgatgaaatacGCTGTGAAAGTCAGTTTCAGTCGAGATGGgg tttttataagatgctttgatAATTGgtgataattggtcatttgaagtaat aaaatgacacgttctttagaaaaaaggaacaagattgttttattactggt taacgaccaactaaattaaataagagcttgtaaactNgcctgccccaaag ttttagcctcgttttggcgaaaactcgtgaccacacccttaaaaatgaaa attttcaaaaaatgaaaaaaacatccgcagatattcacccaaggaacaag tgtgccatttatatgaacaaactataaggtttcgatggctaaaaaatcaa aat

Coding sequence (CDS) from alignment at scaffold_495:172385..176837+

>TCONS_00069157 ID=TCONS_00069157|Name=TCONS_00069157|organism=Clytia hemisphaerica|type=CDS|length=8208bp|location=Sequence derived from alignment at scaffold_495:172385..176837+ (Clytia hemisphaerica)
ATGGGGAGAGAAATTAGATTCacaatttgtttcattttgatatttttgtc
aaCAATACAATCAAACCtggatccaagccacgatatcAACACAATCAATA
CCACAAGTGAAATTCTTTATGGAGTACCTTGTCATAAAGATATTGGTAAA
TCGTCTGCCGTGAATTTCAACCATAATTCAGAACGccagattttcaaaaa
ggataaaaaGTACACATCTTCACAATGGGTTATGCAACTTCGTCTATCAA
GCATTAACACTGTGGTCAACTCAATGCTGGTCATTGATAACAGCACCGTC
ATTGAAATGTTTCTTGAtaAATACAGAGTCACCTCTCTGACCAACACAAC
TGTAACCACAAGTAAATTGCAATCCATCTTCTCACACATTTATGACATCT
CAATAACATGTGCATCATCAACTATCAATGAAATCGCTGTAAAGGTTCAA
CTAATTGACACCAAAATTATTGGCGTTAACCATAAACATATCCaaccaaa
aaacgaGCATTTCCTTCACACAAGCCCGATCGGGTACTTCACATCATTTT
ATTATCCGTTTGGATACAAATATGGCAGCCGAGTAGTGcacaaaatcaaa
acttttggaaaacACAAGATAATTCACATCCATTTTATGGACGTTCAAAT
GACACAATATGGATTTGTTTGTAGCAGCCATGATGATAATCTAAGGATTA
GAGGAAGCGATCAACTTGATGAGAGGTTTGAATATGCAGATACAGTCGGT
TATACTTTAATGTGTCATTTCGATACACCATACTCGATTGAGGTCTCCGG
CTACGAATATATCTTTATACAGTTCAATGCACTGCATTCAACCATCGCGC
ATCGTGGGTACGCAATTGGTTATGAAATAAAGGATGATGTTTCAAAGACA
AATCCAGAAGTCTCAAAAGCCCGTATCATAATGGCGACCATTGTCGGTAT
AGTATTCGGTATGTGTTTGAGTACCGCTGTTATAGTGATTGTATTATACC
GGAAAAGAAAACGGAAAGTGCCAGAAGATCCGGAAGAGATGTCAAAACAT
ACGGAAGACGAGCTTAGTGGAGATAATacgaaaaatgatgaaaattataG
TTCCAATACAGGAGATGAAGACTCAAGGCAATCTGTTGATATATGTGAAG
GTGGAACTTCAAGAGATTTTGGTGCACTTAACGGATTGAATTTAGAACAT
TTACAAAGATTAAATAAATTGTTTAGTTCAACTGTTGCAGCGGACGGTGA
GGGACAAAAGGAAAGTAAAGATGAAGCAAATGAAAAGGATAACTCATCTC
aaaatgatgatgaaatacGCTGTGAAAGTCAGTTTCAGTCGAGATGGggt
ttttataagatgctttgaATGGGGAGAGAAATTAGATTCacaatttgttt
cattttgatatttttgtcaaCAATACAATCAAACCtggatccaagccacg
atatcAACACAATCAATACCACAAGTGAAATTCTTTATGGAGTACCTTGT
CATAAAGATATTGGTAAATCGTCTGCCGTGAATTTCAACCATAATTCAGA
ACGccagattttcaaaaaggataaaaaGTACACATCTTCACAATGGGTTA
TGCAACTTCGTCTATCAAGCATTAACACTGTGGTCAACTCAATGCTGGTC
ATTGATAACAGCACCGTCATTGAAATGTTTCTTGAtaAATACAGAGTCAC
CTCTCTGACCAACACAACTGTAACCACAAGTAAATTGCAATCCATCTTCT
CACACATTTATGACATCTCAATAACATGTGCATCATCAACTATCAATGAA
ATCGCTGTAAAGGTTCAACTAATTGACACCAAAATTATTGGCGTTAACCA
TAAACATATCCaaccaaaaaacgaGCATTTCCTTCACACAAGCCCGATCG
GGTACTTCACATCATTTTATTATCCGTTTGGATACAAATATGGCAGCCGA
GTAGTGcacaaaatcaaaacttttggaaaacACAAGATAATTCACATCCA
TTTTATGGACGTTCAAATGACACAATATGGATTTGTTTGTAGCAGCCATG
ATGATAATCTAAGGATTAGAGGAAGCGATCAACTTGATGAGAGGTTTGAA
TATGCAGATACAGTCGGTTATACTTTAATGTGTCATTTCGATACACCATA
CTCGATTGAGGTCTCCGGCTACGAATATATCTTTATACAGTTCAATGCAC
TGCATTCAACCATCGCGCATCGTGGGTACGCAATTGGTTATGAAATAAAG
GATGATGTTTCAAAGACAAATCCAGAAGTCTCAAAAGCCCGTATCATAAT
GGCGACCATTGTCGGTATAGTATTCGGTATGTGTTTGAGTACCGCTGTTA
TAGTGATTGTATTATACCGGAAAAGAAAACGGAAAGTGCCAGAAGATCCG
GAAGAGATGTCAAAACATACGGAAGACGAGCTTAGTGGAGATAATacgaa
aaatgatgaaaattataGTTCCAATACAGGAGATGAAGACTCAAGGCAAT
CTGTTGATATATGTGAAGGTGGAACTTCAAGAGATTTTGGTGCACTTAAC
GGATTGAATTTAGAACATTTACAAAGATTAAATAAATTGTTTAGTTCAAC
TGTTGCAGCGGACGGTGAGGGACAAAAGGAAAGTAAAGATGAAGCAAATG
AAAAGGATAACTCATCTCaaaatgatgatgaaatacGCTGTGAAAGTCAG
TTTCAGTCGAGATGGggtttttataagatgctttgaATGGGGAGAGAAAT
TAGATTCacaatttgtttcattttgatatttttgtcaaCAATACAATCAA
ACCtggatccaagccacgatatcAACACAATCAATACCACAAGTGAAATT
CTTTATGGAGTACCTTGTCATAAAGATATTGGTAAATCGTCTGCCGTGAA
TTTCAACCATAATTCAGAACGccagattttcaaaaaggataaaaaGTACA
CATCTTCACAATGGGTTATGCAACTTCGTCTATCAAGCATTAACACTGTG
GTCAACTCAATGCTGGTCATTGATAACAGCACCGTCATTGAAATGTTTCT
TGAtaAATACAGAGTCACCTCTCTGACCAACACAACTGTAACCACAAGTA
AATTGCAATCCATCTTCTCACACATTTATGACATCTCAATAACATGTGCA
TCATCAACTATCAATGAAATCGCTGTAAAGGTTCAACTAATTGACACCAA
AATTATTGGCGTTAACCATAAACATATCCaaccaaaaaacgaGCATTTCC
TTCACACAAGCCCGATCGGGTACTTCACATCATTTTATTATCCGTTTGGA
TACAAATATGGCAGCCGAGTAGTGcacaaaatcaaaacttttggaaaacA
CAAGATAATTCACATCCATTTTATGGACGTTCAAATGACACAATATGGAT
TTGTTTGTAGCAGCCATGATGATAATCTAAGGATTAGAGGAAGCGATCAA
CTTGATGAGAGGTTTGAATATGCAGATACAGTCGGTTATACTTTAATGTG
TCATTTCGATACACCATACTCGATTGAGGTCTCCGGCTACGAATATATCT
TTATACAGTTCAATGCACTGCATTCAACCATCGCGCATCGTGGGTACGCA
ATTGGTTATGAAATAAAGGATGATGTTTCAAAGACAAATCCAGAAGTCTC
AAAAGCCCGTATCATAATGGCGACCATTGTCGGTATAGTATTCGGTATGT
GTTTGAGTACCGCTGTTATAGTGATTGTATTATACCGGAAAAGAAAACGG
AAAGTGCCAGAAGATCCGGAAGAGATGTCAAAACATACGGAAGACGAGCT
TAGTGGAGATAATacgaaaaatgatgaaaattataGTTCCAATACAGGAG
ATGAAGACTCAAGGCAATCTGTTGATATATGTGAAGGTGGAACTTCAAGA
GATTTTGGTGCACTTAACGGATTGAATTTAGAACATTTACAAAGATTAAA
TAAATTGTTTAGTTCAACTGTTGCAGCGGACGGTGAGGGACAAAAGGAAA
GTAAAGATGAAGCAAATGAAAAGGATAACTCATCTCaaaatgatgatgaa
atacGCTGTGAAAGTCAGTTTCAGTCGAGATGGggtttttataagatgct
ttgaATGGGGAGAGAAATTAGATTCacaatttgtttcattttgatatttt
tgtcaaCAATACAATCAAACCtggatccaagccacgatatcAACACAATC
AATACCACAAGTGAAATTCTTTATGGAGTACCTTGTCATAAAGATATTGG
TAAATCGTCTGCCGTGAATTTCAACCATAATTCAGAACGccagattttca
aaaaggataaaaaGTACACATCTTCACAATGGGTTATGCAACTTCGTCTA
TCAAGCATTAACACTGTGGTCAACTCAATGCTGGTCATTGATAACAGCAC
CGTCATTGAAATGTTTCTTGAtaAATACAGAGTCACCTCTCTGACCAACA
CAACTGTAACCACAAGTAAATTGCAATCCATCTTCTCACACATTTATGAC
ATCTCAATAACATGTGCATCATCAACTATCAATGAAATCGCTGTAAAGGT
TCAACTAATTGACACCAAAATTATTGGCGTTAACCATAAACATATCCaac
caaaaaacgaGCATTTCCTTCACACAAGCCCGATCGGGTACTTCACATCA
TTTTATTATCCGTTTGGATACAAATATGGCAGCCGAGTAGTGcacaaaat
caaaacttttggaaaacACAAGATAATTCACATCCATTTTATGGACGTTC
AAATGACACAATATGGATTTGTTTGTAGCAGCCATGATGATAATCTAAGG
ATTAGAGGAAGCGATCAACTTGATGAGAGGTTTGAATATGCAGATACAGT
CGGTTATACTTTAATGTGTCATTTCGATACACCATACTCGATTGAGGTCT
CCGGCTACGAATATATCTTTATACAGTTCAATGCACTGCATTCAACCATC
GCGCATCGTGGGTACGCAATTGGTTATGAAATAAAGGATGATGTTTCAAA
GACAAATCCAGAAGTCTCAAAAGCCCGTATCATAATGGCGACCATTGTCG
GTATAGTATTCGGTATGTGTTTGAGTACCGCTGTTATAGTGATTGTATTA
TACCGGAAAAGAAAACGGAAAGTGCCAGAAGATCCGGAAGAGATGTCAAA
ACATACGGAAGACGAGCTTAGTGGAGATAATacgaaaaatgatgaaaatt
ataGTTCCAATACAGGAGATGAAGACTCAAGGCAATCTGTTGATATATGT
GAAGGTGGAACTTCAAGAGATTTTGGTGCACTTAACGGATTGAATTTAGA
ACATTTACAAAGATTAAATAAATTGTTTAGTTCAACTGTTGCAGCGGACG
GTGAGGGACAAAAGGAAAGTAAAGATGAAGCAAATGAAAAGGATAACTCA
TCTCaaaatgatgatgaaatacGCTGTGAAAGTCAGTTTCAGTCGAGATG
GggtttttataagatgctttgaATGGGGAGAGAAATTAGATTCacaattt
gtttcattttgatatttttgtcaaCAATACAATCAAACCtggatccaagc
cacgatatcAACACAATCAATACCACAAGTGAAATTCTTTATGGAGTACC
TTGTCATAAAGATATTGGTAAATCGTCTGCCGTGAATTTCAACCATAATT
CAGAACGccagattttcaaaaaggataaaaaGTACACATCTTCACAATGG
GTTATGCAACTTCGTCTATCAAGCATTAACACTGTGGTCAACTCAATGCT
GGTCATTGATAACAGCACCGTCATTGAAATGTTTCTTGAtaAATACAGAG
TCACCTCTCTGACCAACACAACTGTAACCACAAGTAAATTGCAATCCATC
TTCTCACACATTTATGACATCTCAATAACATGTGCATCATCAACTATCAA
TGAAATCGCTGTAAAGGTTCAACTAATTGACACCAAAATTATTGGCGTTA
ACCATAAACATATCCaaccaaaaaacgaGCATTTCCTTCACACAAGCCCG
ATCGGGTACTTCACATCATTTTATTATCCGTTTGGATACAAATATGGCAG
CCGAGTAGTGcacaaaatcaaaacttttggaaaacACAAGATAATTCACA
TCCATTTTATGGACGTTCAAATGACACAATATGGATTTGTTTGTAGCAGC
CATGATGATAATCTAAGGATTAGAGGAAGCGATCAACTTGATGAGAGGTT
TGAATATGCAGATACAGTCGGTTATACTTTAATGTGTCATTTCGATACAC
CATACTCGATTGAGGTCTCCGGCTACGAATATATCTTTATACAGTTCAAT
GCACTGCATTCAACCATCGCGCATCGTGGGTACGCAATTGGTTATGAAAT
AAAGGATGATGTTTCAAAGACAAATCCAGAAGTCTCAAAAGCCCGTATCA
TAATGGCGACCATTGTCGGTATAGTATTCGGTATGTGTTTGAGTACCGCT
GTTATAGTGATTGTATTATACCGGAAAAGAAAACGGAAAGTGCCAGAAGA
TCCGGAAGAGATGTCAAAACATACGGAAGACGAGCTTAGTGGAGATAATa
cgaaaaatgatgaaaattataGTTCCAATACAGGAGATGAAGACTCAAGG
CAATCTGTTGATATATGTGAAGGTGGAACTTCAAGAGATTTTGGTGCACT
TAACGGATTGAATTTAGAACATTTACAAAGATTAAATAAATTGTTTAGTT
CAACTGTTGCAGCGGACGGTGAGGGACAAAAGGAAAGTAAAGATGAAGCA
AATGAAAAGGATAACTCATCTCaaaatgatgatgaaatacGCTGTGAAAG
TCAGTTTCAGTCGAGATGGggtttttataagatgctttgaATGGGGAGAG
AAATTAGATTCacaatttgtttcattttgatatttttgtcaaCAATACAA
TCAAACCtggatccaagccacgatatcAACACAATCAATACCACAAGTGA
AATTCTTTATGGAGTACCTTGTCATAAAGATATTGGTAAATCGTCTGCCG
TGAATTTCAACCATAATTCAGAACGccagattttcaaaaaggataaaaaG
TACACATCTTCACAATGGGTTATGCAACTTCGTCTATCAAGCATTAACAC
TGTGGTCAACTCAATGCTGGTCATTGATAACAGCACCGTCATTGAAATGT
TTCTTGAtaAATACAGAGTCACCTCTCTGACCAACACAACTGTAACCACA
AGTAAATTGCAATCCATCTTCTCACACATTTATGACATCTCAATAACATG
TGCATCATCAACTATCAATGAAATCGCTGTAAAGGTTCAACTAATTGACA
CCAAAATTATTGGCGTTAACCATAAACATATCCaaccaaaaaacgaGCAT
TTCCTTCACACAAGCCCGATCGGGTACTTCACATCATTTTATTATCCGTT
TGGATACAAATATGGCAGCCGAGTAGTGcacaaaatcaaaacttttggaa
aacACAAGATAATTCACATCCATTTTATGGACGTTCAAATGACACAATAT
GGATTTGTTTGTAGCAGCCATGATGATAATCTAAGGATTAGAGGAAGCGA
TCAACTTGATGAGAGGTTTGAATATGCAGATACAGTCGGTTATACTTTAA
TGTGTCATTTCGATACACCATACTCGATTGAGGTCTCCGGCTACGAATAT
ATCTTTATACAGTTCAATGCACTGCATTCAACCATCGCGCATCGTGGGTA
CGCAATTGGTTATGAAATAAAGGATGATGTTTCAAAGACAAATCCAGAAG
TCTCAAAAGCCCGTATCATAATGGCGACCATTGTCGGTATAGTATTCGGT
ATGTGTTTGAGTACCGCTGTTATAGTGATTGTATTATACCGGAAAAGAAA
ACGGAAAGTGCCAGAAGATCCGGAAGAGATGTCAAAACATACGGAAGACG
AGCTTAGTGGAGATAATacgaaaaatgatgaaaattataGTTCCAATACA
GGAGATGAAGACTCAAGGCAATCTGTTGATATATGTGAAGGTGGAACTTC
AAGAGATTTTGGTGCACTTAACGGATTGAATTTAGAACATTTACAAAGAT
TAAATAAATTGTTTAGTTCAACTGTTGCAGCGGACGGTGAGGGACAAAAG
GAAAGTAAAGATGAAGCAAATGAAAAGGATAACTCATCTCaaaatgatga
tgaaatacGCTGTGAAAGTCAGTTTCAGTCGAGATGGggtttttataaga
tgctttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043107XLOC_043107Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069157-proteinTCONS_00069157-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069157-exon-scaffold_495-1491911889:172385..172865TCONS_00069157-exon-scaffold_495-1491911889:172385..172865Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1510915933:172385..172865TCONS_00069157-exon-scaffold_495-1510915933:172385..172865Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1575043694:172385..172865TCONS_00069157-exon-scaffold_495-1575043694:172385..172865Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1491911889:173117..173224TCONS_00069157-exon-scaffold_495-1491911889:173117..173224Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1510915933:173117..173224TCONS_00069157-exon-scaffold_495-1510915933:173117..173224Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1575043694:173117..173224TCONS_00069157-exon-scaffold_495-1575043694:173117..173224Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1491911889:173756..173941TCONS_00069157-exon-scaffold_495-1491911889:173756..173941Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1510915933:173756..173941TCONS_00069157-exon-scaffold_495-1510915933:173756..173941Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1575043694:173756..173941TCONS_00069157-exon-scaffold_495-1575043694:173756..173941Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1491911889:174722..174921TCONS_00069157-exon-scaffold_495-1491911889:174722..174921Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1510915933:174722..174921TCONS_00069157-exon-scaffold_495-1510915933:174722..174921Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1575043694:174722..174921TCONS_00069157-exon-scaffold_495-1575043694:174722..174921Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1491911889:175501..175683TCONS_00069157-exon-scaffold_495-1491911889:175501..175683Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1510915933:175501..175683TCONS_00069157-exon-scaffold_495-1510915933:175501..175683Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1575043694:175501..175683TCONS_00069157-exon-scaffold_495-1575043694:175501..175683Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1491911889:176072..176837TCONS_00069157-exon-scaffold_495-1491911889:176072..176837Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1510915933:176072..176837TCONS_00069157-exon-scaffold_495-1510915933:176072..176837Clytia hemisphaericaexon
TCONS_00069157-exon-scaffold_495-1575043694:176072..176837TCONS_00069157-exon-scaffold_495-1575043694:176072..176837Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_495supercontigscaffold_495:172385..176837 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0867077 0 0.295487 0.306869 0.264537 8.56099 9.1628 8.87305 7.35481 7.48212 7.87125 0.768764 0.802851 0.0504898 0.302708 0.867742 1.49158 2.2662 3.41005 2.43339 2.01278 1.24518 1.66837 1.4205 1.52848 4.99882 4.1638 0.0919379 0.10055
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000859CUB_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069157 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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