Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073449 ID=TCONS_00073449|Name=TCONS_00073449|organism=Clytia hemisphaerica|type=transcript|length=726bp
TCGCTaaccgctatattttcttaatgattgtttttctccttattgctatc
taagtttcatcatcaggtaggtccattcagcatgttgcttgttttttctT
GTCGTAGGTTGGGTTCATCACCTGACAGCATATTACCGTTCGAAGCCTTA
TTAACGTTGGAGGAACAGCCACTTGTTTGACAACCTGAATACAATGCACA
AATCCCGTTTTGTTAGCGGTGAAGAAAAATATACAGAAAGTAGACGTCAA
AGGCTCGGTCCCAGACCTCAAGACATCAgcacttgatgacgtcattaata
GTATAAATATGGCACGATTTAGAAGAAGTATCTTCAGTATACAGTTGTGA
AGAGCAAGAACAAACCAACGGTTCTGAAGTGATATTTAAGTGCTACGATC
AAGAATAGCCGTTTATCATCTATAAAAAGGTATATACAGTAATAATTTAT
TGCTTTTATTCAAGACCTATAACTCAGTTTTACATACATGTGATTGACAA
GCATGTATTAAAGGCTTCTTAAAGGGTAAGCTTCATTAAAGAGTCAAAAT
AAGATGAGCTCCCCTCTTGCAagcttttctgtttttcttgTATTTATAAT
TTGCGGAAGAGATTATTTCTTCGACGCAACTTCTACTTTTACTAAATTAA
TCTATGGCACACCTAGACCTCAGCTTCTCTGTTTCACGTTTAAGGTAATC
CAGTCTTGTAATGGGTTTGATGTGAA Run BLAST on NCBI transcript from alignment at scaffold_92:222730..223870+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073449 ID=TCONS_00073449|Name=TCONS_00073449|organism=Clytia hemisphaerica|type=transcript|length=1141bp|location=Sequence derived from alignment at scaffold_92:222730..223870+ (Clytia hemisphaerica)
TCGCTaaccgctatattttcttaatgattgtttttctccttattgctatc
taagtttcatcatcaggtaggtccattcagcatgttgcttgttttttctT
GTCGTAGGTTGGGTTCATCACCTGACAGCATATTACCGTTCGAAGCCTTA
TTAACGTTGGAGGAACAGCCACTTGTTTGACAACCTGAATACAATGCACA
AATCCCGTTTTGTTAGCGGTGAAGAAAAATATACAGGTATACTAAAATTT
CTACTCTCTTATTAATTGCAAGGGCTGGAAATCTCTTAATACGCTTGTCC
TCCTTCGGGTTGTGGGTTTTCTATGGTATCGCCCTTAAATTTATCACTTG
TACAACAAATAACAAAGGTTTTTTGAAGCTCAGTATGATATTTCAAGTTT
GTGTTGACCACTAAAACGATTCTCATTGGGTTAACTTtaactttttcaac
caatcaatgcaaatgttttaaaaagattgCATGacttgtttttgtcattt
tttgttttgtctgaaagttgaaattgaatttttagggataggaaagaaaa
agaaaccgCAAAGTGATAAAGGATATAGCAGTGTACattctcctttttgt
ttttAGTATGAGCCTTGTTTACTTACATAAACactgttgtttttttgtta
GAAAGTAGACGTCAAAGGCTCGGTCCCAGACCTCAAGACATCAgcacttg
atgacgtcattaataGTATAAATATGGCACGATTTAGAAGAAGTATCTTC
AGTATACAGTTGTGAAGAGCAAGAACAAACCAACGGTTCTGAAGTGATAT
TTAAGTGCTACGATCAAGAATAGCCGTTTATCATCTATAAAAAGGTATAT
ACAGTAATAATTTATTGCTTTTATTCAAGACCTATAACTCAGTTTTACAT
ACATGTGATTGACAAGCATGTATTAAAGGCTTCTTAAAGGGTAAGCTTCA
TTAAAGAGTCAAAATAAGATGAGCTCCCCTCTTGCAagcttttctgtttt
tcttgTATTTATAATTTGCGGAAGAGATTATTTCTTCGACGCAACTTCTA
CTTTTACTAAATTAATCTATGGCACACCTAGACCTCAGCTTCTCTGTTTC
ACGTTTAAGGTAATCCAGTCTTGTAATGGGTTTGATGTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073449-exon-scaffold_92-1491911889:222730..222965 | TCONS_00073449-exon-scaffold_92-1491911889:222730..222965 | Clytia hemisphaerica | exon |
| TCONS_00073449-exon-scaffold_92-1510915933:222730..222965 | TCONS_00073449-exon-scaffold_92-1510915933:222730..222965 | Clytia hemisphaerica | exon |
| TCONS_00073449-exon-scaffold_92-1575043694:222730..222965 | TCONS_00073449-exon-scaffold_92-1575043694:222730..222965 | Clytia hemisphaerica | exon |
| TCONS_00073449-exon-scaffold_92-1491911889:223381..223870 | TCONS_00073449-exon-scaffold_92-1491911889:223381..223870 | Clytia hemisphaerica | exon |
| TCONS_00073449-exon-scaffold_92-1510915933:223381..223870 | TCONS_00073449-exon-scaffold_92-1510915933:223381..223870 | Clytia hemisphaerica | exon |
| TCONS_00073449-exon-scaffold_92-1575043694:223381..223870 | TCONS_00073449-exon-scaffold_92-1575043694:223381..223870 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_92 | supercontig | scaffold_92:222730..223870 + |
Blast
The following BLAST results are available for this feature:
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