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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068200 ID=TCONS_00068200|Name=TCONS_00068200|organism=Clytia hemisphaerica|type=transcript|length=1043bp
TTGCTGATACCTACCGCTCATGTAGCATCAAAGGTGGTGAACGGAAAAAA
AGAGgatcttcaaaaaaaatcatcatcggTTCCGTCAAGAGCAAGCTGCC
CACCGACCTTAACACCTTCTTGTTGAATAATGacaacaaaacaaatttca
tcAATCTCTTATTTGATTACATCAttgaaaacaaaggaaaggTCCTGAAA
CTCCTTAACACCGAGGAAATATATCTGTCTGGTGACACCAAAACATACCA
TGTCAACAGAGGACAAGCGAGAATGGACGAGAATCTCACGAGCGACCAAG
AGGAGGCAGACACCAAAGTTATTCTACATGCCCTGCAAATACTCGAATCG
TCAGACAAAGGCACCGTGATTATCAAAAACTCGTCGGCTGACACAGATAT
ATGCGTTATCATGCTGTCCCTCATTCCAGAGAAGCATTCCCACAGAGTTT
TGTATGACTATGGTACTGGCATCAATCGGAAACAAGAATGGTTGGATCAG
TATTCAATCGACCCTACCTACAAGAAAGCCCTTATCGGAATGCATGCATT
TACAGGAAACGATTATGTTTCGTCCTTTTTTAGAAAGAGTAAAACCAACT
GTTGGAAGACGATGATCGATTCACCTAaattcctcaaattcttttccaac
cttggaaacgATCTCAACATCACTGAAGAAATGGTCGCAACAGTAGAAGA
ATTCGTTTGTAGACTATACAAAGCGCCGAAAAAAGTGGTCACAGTTAATG
AAGCCAGATTCGCAGCGTTTTCCAAGAAGTTCTGCaaccaaaacaaaatt
attgACCTGAGTACACTTCCGCCATGCAGAGACAGTTTACATCTGCATTT
TTTACGTACAGTTTACATTGCTGTAATGTGGAGGCGAACATCAATGGCAA
GGGTTAACCTCCCAGATTGCTCAGAGTTTGGTTGGGATCCACATGGAAAC
ATTGAATGGATCAAAGAACCGTTCCCAGAAGAGATcgaaaatattctttt
tgagGAAGAAAAAGCTTATGGCGAGGAAAGCGATAGTGAAGAT Run BLAST on NCBI protein sequence of TCONS_00068200-protein >TCONS_00068200-protein ID=TCONS_00068200-protein|Name=TCONS_00068200-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
ADTYRSCSIKGGERKKRGSSKKIIIGSVKSKLPTDLNTFLLNNDNKTNFI
NLLFDYIIENKGKVLKLLNTEEIYLSGDTKTYHVNRGQARMDENLTSDQE
EADTKVILHALQILESSDKGTVIIKNSSADTDICVIMLSLIPEKHSHRVL
YDYGTGINRKQEWLDQYSIDPTYKKALIGMHAFTGNDYVSSFFRKSKTNC
WKTMIDSPKFLKFFSNLGNDLNITEEMVATVEEFVCRLYKAPKKVVTVNE
ARFAAFSKKFCNQNKIIDLSTLPPCRDSLHLHFLRTVYIAVMWRRTSMAR
VNLPDCSEFGWDPHGNIEWIKEPFPEEIENILFEEEKAYGEESDSED Run BLAST on NCBI transcript from alignment at scaffold_48:479565..480607 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068200 ID=TCONS_00068200|Name=TCONS_00068200|organism=Clytia hemisphaerica|type=transcript|length=1043bp|location=Sequence derived from alignment at scaffold_48:479565..480607 (Clytia hemisphaerica)
ATCTTCACTATCGCTTTCCTCGCCATAAGCTTTTTCTTCctcaaaaagaa
tattttcgATCTCTTCTGGGAACGGTTCTTTGATCCATTCAATGTTTCCA
TGTGGATCCCAACCAAACTCTGAGCAATCTGGGAGGTTAACCCTTGCCAT
TGATGTTCGCCTCCACATTACAGCAATGTAAACTGTACGTAAAAAATGCA
GATGTAAACTGTCTCTGCATGGCGGAAGTGTACTCAGGTcaataattttg
ttttggttGCAGAACTTCTTGGAAAACGCTGCGAATCTGGCTTCATTAAC
TGTGACCACTTTTTTCGGCGCTTTGTATAGTCTACAAACGAATTCTTCTA
CTGTTGCGACCATTTCTTCAGTGATGTTGAGATcgtttccaaggttggaa
aagaatttgaggaattTAGGTGAATCGATCATCGTCTTCCAACAGTTGGT
TTTACTCTTTCTAAAAAAGGACGAAACATAATCGTTTCCTGTAAATGCAT
GCATTCCGATAAGGGCTTTCTTGTAGGTAGGGTCGATTGAATACTGATCC
AACCATTCTTGTTTCCGATTGATGCCAGTACCATAGTCATACAAAACTCT
GTGGGAATGCTTCTCTGGAATGAGGGACAGCATGATAACGCATATATCTG
TGTCAGCCGACGAGTTTTTGATAATCACGGTGCCTTTGTCTGACGATTCG
AGTATTTGCAGGGCATGTAGAATAACTTTGGTGTCTGCCTCCTCTTGGTC
GCTCGTGAGATTCTCGTCCATTCTCGCTTGTCCTCTGTTGACATGGTATG
TTTTGGTGTCACCAGACAGATATATTTCCTCGGTGTTAAGGAGTTTCAGG
AcctttcctttgttttcaaTGATGTAATCAAATAAGAGATTgatgaaatt
tgttttgttgtCATTATTCAACAAGAAGGTGTTAAGGTCGGTGGGCAGCT
TGCTCTTGACGGAAccgatgatgattttttttgaagatcCTCTTTTTTTC
CGTTCACCACCTTTGATGCTACATGAGCGGTAGGTATCAGCAA Coding sequence (CDS) from alignment at scaffold_48:479565..480607 >TCONS_00068200 ID=TCONS_00068200|Name=TCONS_00068200|organism=Clytia hemisphaerica|type=CDS|length=1041bp|location=Sequence derived from alignment at scaffold_48:479565..480607 (Clytia hemisphaerica)
ATCTTCACTATCGCTTTCCTCGCCATAAGCTTTTTCTTCctcaaaaagaa
tattttcgATCTCTTCTGGGAACGGTTCTTTGATCCATTCAATGTTTCCA
TGTGGATCCCAACCAAACTCTGAGCAATCTGGGAGGTTAACCCTTGCCAT
TGATGTTCGCCTCCACATTACAGCAATGTAAACTGTACGTAAAAAATGCA
GATGTAAACTGTCTCTGCATGGCGGAAGTGTACTCAGGTcaataattttg
ttttggttGCAGAACTTCTTGGAAAACGCTGCGAATCTGGCTTCATTAAC
TGTGACCACTTTTTTCGGCGCTTTGTATAGTCTACAAACGAATTCTTCTA
CTGTTGCGACCATTTCTTCAGTGATGTTGAGATcgtttccaaggttggaa
aagaatttgaggaattTAGGTGAATCGATCATCGTCTTCCAACAGTTGGT
TTTACTCTTTCTAAAAAAGGACGAAACATAATCGTTTCCTGTAAATGCAT
GCATTCCGATAAGGGCTTTCTTGTAGGTAGGGTCGATTGAATACTGATCC
AACCATTCTTGTTTCCGATTGATGCCAGTACCATAGTCATACAAAACTCT
GTGGGAATGCTTCTCTGGAATGAGGGACAGCATGATAACGCATATATCTG
TGTCAGCCGACGAGTTTTTGATAATCACGGTGCCTTTGTCTGACGATTCG
AGTATTTGCAGGGCATGTAGAATAACTTTGGTGTCTGCCTCCTCTTGGTC
GCTCGTGAGATTCTCGTCCATTCTCGCTTGTCCTCTGTTGACATGGTATG
TTTTGGTGTCACCAGACAGATATATTTCCTCGGTGTTAAGGAGTTTCAGG
AcctttcctttgttttcaaTGATGTAATCAAATAAGAGATTgatgaaatt
tgttttgttgtCATTATTCAACAAGAAGGTGTTAAGGTCGGTGGGCAGCT
TGCTCTTGACGGAAccgatgatgattttttttgaagatcCTCTTTTTTTC
CGTTCACCACCTTTGATGCTACATGAGCGGTAGGTATCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068200-exon-scaffold_48-1491911889:479565..480607 | TCONS_00068200-exon-scaffold_48-1491911889:479565..480607 | Clytia hemisphaerica | exon |
| TCONS_00068200-exon-scaffold_48-1510915933:479565..480607 | TCONS_00068200-exon-scaffold_48-1510915933:479565..480607 | Clytia hemisphaerica | exon |
| TCONS_00068200-exon-scaffold_48-1575043694:479565..480607 | TCONS_00068200-exon-scaffold_48-1575043694:479565..480607 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_48 | supercontig | scaffold_48:479565..480607 . |
Blast
The following BLAST results are available for this feature:
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