TCONS_00068065 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068065
Unique NameTCONS_00068065
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length329

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068065 ID=TCONS_00068065|Name=TCONS_00068065|organism=Clytia hemisphaerica|type=transcript|length=329bp
ATAGGGGCCAATACACTAGTTTCCAAAGCCATACCTTTTGTAATCCAAAA
GTTGCTTGGATAAGAAGACTTGTCATCTGAGCTTTGAAATTGTTTCACCA
GACCTTTACCTTTTCACCGGCTTTCAGTATTTCGTATATAGACTCAAATA
GCACTAGTTTCCAAAGCTATACCACCTGGAATCACAAAGTTGCTTGGATA
AGAAGACTTGTCGTCTGAGCTTACCGAATTTGTTCCAAAACTAACATTTG
GTATTCGTCAATTCAATCAGCAATGTCAATGTACATCAATAATAGAATCT
ATAACTTTGGAGAGATTGTTCATGCAACG
Run BLAST on NCBI

transcript from alignment at scaffold_478:282070..282398

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068065 ID=TCONS_00068065|Name=TCONS_00068065|organism=Clytia hemisphaerica|type=transcript|length=329bp|location=Sequence derived from alignment at scaffold_478:282070..282398 (Clytia hemisphaerica)
CGTTGCATGAACAATCTCTCCAAAGTTATAGATTCTATTATTGATGTACA
TTGACATTGCTGATTGAATTGACGAATACCAAATGTTAGTTTTGGAACAA
ATTCGGTAAGCTCAGACGACAAGTCTTCTTATCCAAGCAACTTTGTGATT
CCAGGTGGTATAGCTTTGGAAACTAGTGCTATTTGAGTCTATATACGAAA
TACTGAAAGCCGGTGAAAAGGTAAAGGTCTGGTGAAACAATTTCAAAGCT
CAGATGACAAGTCTTCTTATCCAAGCAACTTTTGGATTACAAAAGGTATG
GCTTTGGAAACTAGTGTATTGGCCCCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042492XLOC_042492Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068065-exon-scaffold_478-1491911889:282070..282398TCONS_00068065-exon-scaffold_478-1491911889:282070..282398Clytia hemisphaericaexon
TCONS_00068065-exon-scaffold_478-1510915933:282070..282398TCONS_00068065-exon-scaffold_478-1510915933:282070..282398Clytia hemisphaericaexon
TCONS_00068065-exon-scaffold_478-1575043694:282070..282398TCONS_00068065-exon-scaffold_478-1575043694:282070..282398Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:282070..282398 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.591275	0.288293	0	0.98246	0.398683	0.315045	0.380088	0.711668	0.747384	0.61717	0.59904	0.196893	0.786476	1.63353	2.35022	1.44122	3.55094	1.36485	2.19988	1.6443	1.14336	0.836533	0.677944	0.616349	1.26965	1.41642	0	0	0	0.334317
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068065 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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