TCONS_00067695 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067695
Unique NameTCONS_00067695
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1333

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067695 ID=TCONS_00067695|Name=TCONS_00067695|organism=Clytia hemisphaerica|type=transcript|length=1333bp
gtgtttttattttcagggggataaaccaaataaacaATTCAAATGGTTTT
TCACTCATTGCTAAGAAATACTTTCAAACAGAAATGTTGTAAATGTCATT
TGCTATTGTTGCCCAAACATTCGAGGATGGTCTCAAGCTATGGTATCCAG
ACTAACAAAGGTATATTCGAAATTAAGAAATCGAAAAGGAACACTCATAA
AGACATATCAAGTAATTTATCTTGGATGAaggataaaaaatatttagagt
TTTACCAATGTGAGAAGGCACTGCACCCTGTGAAACAACTATTAACTTTA
CATAAATTTGAGCAACTTTCAAAGTCAACTTTATTGAAAGGATTTATCAA
AGGTGAAGGATTTCTACCAAGCGTTGTGCAAATGACCAACCAAATAGAAT
TCAACAAAGGGAATTTAGAATTGGGTAAAACtgttttcgaaattttggat
AGTGGTACATTAGCGATGTTAAATGAACGTCAAGGAAACGAACATGATTA
TTATCACTTACAAGATTATGATGGACCACACCCAGTTTTTGAGGACCCAA
AATTCGCACCGGTTTACAAAAACTTTGATCAAGCGAAAACAAATCTATCC
AagGTTTGTACTCGACATGAATCTTTGGAAGTCAAAAATATGTTGAATAC
ACTGCTAAAGGAACCGAATACTATAGGTCATAGTCCTAAACATCCTTTCG
TTGTTGTGGAAGGTCTTGATGGTACAGGGAAATCCACCATGACACAGAAT
TTGGGTAAATTTCTGGGAGCTGAAATTCTCGGCACACCGCCAGCGTCGAT
CAAGCATATACGTAAATATTTTGACGTCTTTCCTGAATTATGCCGCCGTT
CTTTTTACGCTTACGGGAATTACGTAGCTGCTGAAGAAATCATACAAATT
CTACAATCACGTCCAGTCGTTCTTGACAGGTATTATCACAGTACAACGGC
TTACGCGATTGCTAAAGACTCTGGATTCGGAATCGAGAAACATCTACCGT
CTAAAGGCAATCCTTTATATTCATGGCCTAATGATTTGTTGCGACCCTCC
GCCGTAGTGTTTCTTACGACAGAAGAGAAGGAGCGTGATGAACGAATGAA
TATAAGAGATGAACGCACTGCGGAGGAGAACGAGTTGAGAGATAGCCAAA
TGTTTCGTAAAAGGATAATGGAAGCATATCGTAGAATTAATTTGGAAGAC
GGCTGGGTAGAAGTCGATACAGGTGGTACTCAAGAAGAAAGTTTGCAGAA
AGCTGTCAATGGATTGAAACAGATTGGTGTACTTTGAGTTTGTAATCATT
AGAGGTATATCgatcatcaaattttaaaaggag
Run BLAST on NCBI

transcript from alignment at scaffold_472:361808..377439-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067695 ID=TCONS_00067695|Name=TCONS_00067695|organism=Clytia hemisphaerica|type=transcript|length=15632bp|location=Sequence derived from alignment at scaffold_472:361808..377439- (Clytia hemisphaerica)
GTGTTTTTATTTTCAGGGGGATAAACCAAATAAACAATTCAAATGGTTTT
TCACTCATTGCTAAGAAATACTTTCAAACAGAAATGTTGTAAATGTCATT
TGCTATTGTTGCCCAAACATTCGAGGATGGTCTCAAGCTATGGTATCCAG
ACTAACAAAGGTATATTCGAAATTAAGAAATCGAAAAGGAACACTCATAA
AGACATATCAAGTAATTTATCTTGGATGAAGGATAAAAAATATTTAGAGT
TTTACCAATGTGAGAAGGCACTGCACCCTGTGAAACAACTATTAACTTTA
CATAAATTTGAGCAACTTTCAAAGTCAACTTTATTGAAAGGATTTATCAA
AGGTGAAGGATTTCTACCAAGCGTTGTGCAAATGACCAACCAAATAGAAT
TCAACAAAGGGAATTTAGAATTGGGTAAAACTGTTTTCGAAATTTTGGAT
AGTGGTACATTAGCGATGTTAAATGAACGTCAAGGAAACGAACATGATTA
TTATCACTTACAAGATTATGATGGACCACACCCAGTTTTTGAGGACCCAA
AATTCGCACCGGTTTACAAAAACTTTGATCAAGCGAAAACAAATCTATCC
AAGGTATATTTCAAAATGATTAATAGTTANTTCTTTCTCGCTATTTAGTT
TTTATATTTAAAGTTTTTTATCCTTAGCTGTTTTTTCTAAGTATCTTTAA
TACCGGGTGACCCACGAAAAAGTTCAGACGTTTCCCGACGTCTTGAGGCC
GAACAGATGTCCCAAAGTGCTTGGAGTTTTGATATTTAGAAAGTAGATAC
CCTAACATAAAATTTGAGCTATCACTTTTTAAATTTGACCAACTTGTTCT
CTACTTATGAGCTTTTAAAGTTAAAATTCACTTTTTGGAAAGTGTAAAAA
ACACGTAAAAAAGAGGTATTAAATTTATGCAATCAATTAGAAAATCACTT
ACAATTGACTTATTCAACGAGTTTTATGACATTAATAATTAATAAAAACA
CCTTTAAAAGTAACTTTTGTTTAAAACAAAACTAGTTTTTATAAAAATTG
GCGCTTTTGTAGATTTTTCAGATTTTTTTCAAAAACTGTATATCAAAAAC
GTCTAAAAATACCAAATTTGATACCCCTTTTTTACGTGTTTTTTACACTT
TCCGAAAAGTGAATTTTGACTTTAAAAGCTCATAAGTAGAGAGCAAGTTG
GTCAAATTTAAAAAGTGATAACTCAAATTTTAAGTTAGGATATCTGCTCT
CTAAATATCAAAACTCCAAGCACTTTGGGACATTTGTTCGGCCTCAAGAC
GTCGGGAAACGTCTGAACTTTTTCGTGGGTCACCCGGTATATATTGTACG
AGTAGTGATAACTTGTCAATCGTCAACTTGACAAATAAAACCAAACCAAT
CACCCCCTACATTTGCAATCTGCAGTGTTCACATGTTTGTTCGAGCTAAG
CCTCTCACTAGTGCCTTTTTCTATGTTTTCTTTCGTTCTATTGTTTATTT
CTCCTTCGTTGTTTTGATGAAATCAACATCAAAACATTCGAAAAAAGAAT
CGAACATTCATTCAAAAGAACAACAAAAAAACTCGCTTACCAGACCACTT
ATGTTGAATGCGGTCTCCTATTTCTATGTGTAAGATATTAAAGATACGGT
GAATATCGTATCTCACTTAGCCAATCAGAGTATTAATAACTTTCAGGTGG
ACAATAACAAACGTTATTTCAACCCATCGACTTGAATGCCATCGACCACC
AGGTCGAAGGCATTAACGAGTTTGTGTATCTGTATTTTCTGTGACGGAAA
TGGTTCTGATTTGTCTAGATCCTGATCTACTGAGGACAATGGTAAATAAG
CACTTTTACCGTCCTCTTTATTGCGGTTCAGAATTACAGCTTGTTCCCAA
TCATTCCAGTCACTCCAGTCACTCCTCCTTTCTCAAAGGGTAGATACATA
AAACTCGCTATTGAATTCGTTCGCCATTCTATTCGTTAAGTGAAGAATAT
AGATTAAATAAAACCAAGACTTGTTTCCGTCTACTTTGGATCGGGGGGGG
GGGCGCTTAGGCAAAATTGGGTACGGGGACGTGGCGCTGGTCAGGGTCTC
TTTTTATGTCCCGAAGATATCTGACTTTTCACTGACCATTCACGTTTCAA
TTTATTTATCCATATTTATTTTACACTTCTCTAGGTTTGTACTCGACATG
AATCTTTGGAAGTCAAAAATATGTTGAATACACTGCTAAAGGAACCGAAT
ACTATAGGTCATAGTCCTAAACATCCTTTCGTTGTTGTGGAAGGTCTTGA
TGGTACAGGTAACTTGTCTACTGAAAATCCAATTTTCGTGGAACTTATTT
TTGCGTTTTTTTTTTGTGTCTAACTATTTTTACTATAAATTCCGAAAACT
AGCTGATTTTTTTATCTTGGTCTTATGTCCCATGAATTGAAATGTAGAAA
AATACCGATGGAAGACTTTATTTTGCAGTAGCTTGCAAACAATGATTTGT
GCTTCAACTCTACAGGGAAATCCACCATGACACAGAATTTGGGTAAATTT
CTGGGAGCTGAAATTCTCGGCACACCGCCAGCGTCGATCAAGCATATACG
TAAATATTTTGACGTCTTTCCTGAATTATGCCGCCGTTCTTTTTACGCTT
ACGGGAATTACGTAGCTGCTGAAGAAATCATACAAATTCTACAATCACGT
CCAGTCGTTCTTGACAGGTTTGTTATTTAAAATATCGAATTTAGATTTGA
TATACCTCTGATGATTAATGTTGCTTCGTTGGCATTTTAAAATTCCTTAA
ACATAATAAATTACTTGGACTTTTATAGGGATGAGCTGATGCTCAGATTT
CCGATAAAGAAATCTATAAATAAAACAAATTTAGACTTTCGTTCGATATC
GAGTACCGGACTTAAGTATGATCCGGTATTAATTTGTAGCTGAATCAATA
ATGGCTGTAATTTGATGGACCTAGAACTGTAGATGTCCGTGTCGTGCTCG
TTGAAAAGATATTTTGAGTGAAATGTTATCAACTAGAAATGGGCTCTTCC
AGAAAAAAATAGAATATGGGGAGGAGGTTGAGGATATACGTTTTTTTGGA
AATTTACCCCCCGGACATTGTGACTTCTAACCCCCTGGACAAGCATCAGT
TGACCCCCTTGACATTCAAAATTACCCTCATACAGAGCAAAGCTACCAAA
AAACAGAGCAAGTTTACGCCCCTGGACAAGGCCAATTTATAGATTTTTAC
TACCCCAGGACACTATATCCTCCACATTTTTTGGAAGAGCCCAATGGATG
AAATTTAAATTAAAAATAAAAAGCAATTGTGGACATTTTGGTGAATTTCT
CATCGCATAATCGAATCTAACAACTAACAATTATAGTGTAAAAAGATATT
TTAAACTAACCCAAACGTATCACGTATAATATATGGTAACTTCTTATGAA
AAATGTAATAACATATTACAAGAAAAAATAACATCAGACCAAAAATGATA
TTAGGAAAATATGATTTTACAACGTACCAATCAAGATTTTCTTTCTTCTT
ATAAAGGGCGTAACCACAGCCAACCAATATGAACATGTAAAAGAAAAATA
GATAAGTGGTCCTGGAAATGCCTCGTCGTAGAGGAGGGCNAAAAGAAAAA
TAGATAAGTGGTCCTGGAAATGTCTCGTCGTGGAGGAGGGATATTTTGAA
GAGTTTTTATGCTAGTTATTATTGATTGGTGCAGCATGTTCAGTTGAGCA
AGAATCATTTCCATATCCACTTCAGTATATTCAATACTGGGGTCCAATGC
CCTAATTGCGTTTTCTCTAATAAGTCCATCAGGGGATGTCAAATTTTTTA
ATTTGTCTCTAAGTTTCTTACACACATGTGCGCTATTTGGAGCATCTAAG
TATTTGACGTGCAATGGAACAATCCATGAAGGTCCGTACTGAGCATACAT
ACGTTCTTTAGCATCTTTATGGCAAGCAAGTTTCGCCGAGTCCATATAAC
AAGAGCACATGTCCCTCATTGTTGGTCTTGCACCTTCATCTGTCATCATC
TCGTCTGCAATCCATTCATTGAAAACCATATGAACTTGTGGACATCCTTT
CACTGTCCAATGGACTTCAGCATATATGACATCTGGTGTTTGCCACATTG
AAATGCCTTTAAAAACTTTACGTAACTCGTCGTAAAGTATTCCTTGANTG
ACATCTGGTGTTTGCCACATTGAAATACCTTTAAAAACTTTACGTAACTC
GGCGTAAAGTATTCCTTGTGGGATATCAACGTACATATCTACGTCTCCAT
CTGATGATAGACAAGTACTCTCTCTTAACACACCAAGCTCTGTTCCACTT
CTAGGGAAATAGATGGCTCCCATTCTATCCAACTGTTGCCATAACTGCTG
GTGGATTTTCGAACATCTGGTTGATTTTTTGCGCTCTTGTCCGAAAGTGC
AATTCGGACGTATGAAATCAGGACCTGGTTTAATAGCTGGTCTCCACTTC
AACCTTCGGTGGGGATAATCCGTATAAGTGTTTCTAGCGTTCGCATGCCA
CCATCTATGATAAAAGGAGAAAGAAACTTTTGCTTGACTTCACGCCTTGT
TATAGGAGTACGAGACTTTGGCATTTGCCAACTCTTAGGTGTATTGAGAG
ATGCCGGGTATATATGTGTAAGGATCGGGTTTTTACCATCCAAAGTCTAC
TTCTAGTGGCCCTTCATTGAAACTATTCCTGAGCTGTCTAAAAGCTTTTG
AATTTTTCGGAGCATGCCACTTAAAATATATGTTATTATTATTGTTGTTA
TTATTACTTAAGTTTTAACTGTTTATTATTTTTGATAAGGAAGATAGGAA
AAGGATTTCTTTATATGGTTGTTGAAATGAAGTTGAGACTGGTTAGATTA
TATAAGAATTAAATTATTATTAACCCTTTGGTGATTACCCAATGGTAACT
TTGAATTTGAAATTGTCATTATTGGTCCCATAAGAGAGATAGAACTTATT
ACGTATAAAACGAGGGAGGTTCGAGCTTTTAAGGGGGTCCTTTAAAAATA
TAAATGTGGGTGAAACCCTCTACAATTCTTCCGTGGTTTGATAGAAAACA
TTTTCAACTGTGATGTGACTTTTCAGATCTAGTAGCTCTAGAGTTACAAT
TAAAGTTAGACTTTTATCTTTTTAGTAAAGCAAATACCTAGTTTACTGAT
ATTTAGCTTGGTCTCAGTAGGTCGGAAGTTGCTAAAGGTTTAAAAATTTT
ATGAGTCTCGGGTATATACAATTGTCATGAACCTACCTCAAACATTTGTT
AAACCATCTACCCCTGACTACACCTGTCAAATTAACGTTTTGTACATGAT
GTAAAAATCTTGGGTACCATTTCTCTTTTTTCACTCTGTTATTATTAAAA
TAACGTGGATAAGGACAATCTCCATTCCAGTTTTCTTCGTAGTAATCATC
TGATTGGAACTCTCTACTGCTGTTGTATTTTTGTTGCTTTCTGTTAAGAG
GTTTTAACTCATTGTTGATATTTTCAGTTGTAGGTGAGGCTCTGGGTTTC
TCAACTACCTTTCTCGTGCTATGCAGAATCACCAAAGATAGGAGTAAGAC
AACACCTACAATTAAGAAAATGTGCAATTTCCCTTTCATTTCTTATTTTC
CTCGATTAATCAATTCCTTTTTTCTCAGATACTGTCTAACAAATTTATCA
GCATCCAGTATAATATAGTATAATATATAATATAAATTATTCATTTAGCA
TTCACTTGAAAGTATTCGGTATTAAATACTGAATACTTTCAAGTGAATGC
TAAATATAAGTTTTGTAATATACCTAAAGGGAAGAAATTTTGCGGTTCAC
AGCTCATCTACTAAGATTCGGAAGTTTCGCGGAATTTTATTTCGCGGTTG
AGAGGATTTTTTGTTTAAAATATAGCCTATTTTGCCTTGAAAAGACCAAT
TTTATAGGTTATTTTTTTAATCATGAGAATATTCGTGTTTCGCGGAATTT
AATTTCGCGGATTTGTCGAAAAACTGCGCAATTAAATTCTGCGAAAATTT
GTTTCCGCAAAAATCTTCCCTTAAGGTACTAACTACTCTTAAAATTGTAA
GAGATTTTTACTTTATTTAATTTAAGTTTTTTAAAGGAAGCTTATCAGCA
CTAAATATTTAATCCCTGGGTTAAACCCATCATGTGCTTTATTTTCCGTT
TTTTTTCAAACAATATTAATACATTGTCGAAGCGACTAATTACCTTTTAC
CGCGTTTGTTACTATCTTTTTCAAAATACATGTAATATAAAACTTGCAAA
GTTGGGTATTGTACCTTCAGAGCGAAGTCAAATTAATTCTCTTTCTTTGG
GGTNAGAGCGAAGTCAAATTAATTCTCTTTTTTTGGGGTTAACCTACTTA
AAGTATATAAGAAAATTGTTACTATCTTTTTCCTACCTACTTAAAGCCTA
CCTACTTAAAGTATACCTATACCTACCTACTTAAAGTATATAAGAAAATA
AAGTTAAGTACAGTCTTGTTTTGTAAGCATAACGTTCATAAGTGCACTAT
GTGTGAAAATTAGCAAAAAATAAGCATAGTGCTAAAAGCATACCATTCAA
ATTTTGTTTTGAAAATGAGATCAATGAGATAAAAATATCAGATATCAGCC
AAAATTGACCATGTTTTGACAACACTTTCATCTGCATAAAATGAACAAGC
ATAATTTGAGGATGAAAATTAAATTGAAACATGAAATCTTTGAAGCTACC
CAAAACTTTATACGAACCAAAAGCACGCCTATCGTTTCAGCCCGTTGACA
GCTTTCTGTAAATTCCTTTATGAATTCCACCTGTCTTGCTTTATGTTAGT
TTAGAGACTTTCTTCGTTAACTCGCTCATTCAATTTTTTTCTGATTTTAT
ATACAAGAATGTTTAGCGGTAAACCCTCAAGTGTGGTGCAGCCCAAATTT
TTAAAACCATATTTTTGACTGATTTCACCTACAACGGTTAAAGAGTTTTA
CAACCTGACCCTAGTCAATTTTTTTTGGCCCAGCGCTAAGCGGTAGGCCT
TTCATTTGCAACTTTCTGTCCGTCTGTGGTGGATTCCGTCTGTGTGTCCG
TTTTGGTAGAAACGGCGATTAAAACCAGTAACACGCTTTTTAATTTTGCT
TTCTGGAGAGGGAAAAGCTTGCTAAAGTCGGATATAAAAGATATATTTTC
TGATTCTGCACTCCCTCAAAACAATTTTCAAAACAAAACAAGATGGCGGT
CGAAGCGAGGAGGTTGATTCATACTTTCTTGAACATTTTCTTTGCTTTAG
TGGTCAAGAGACGTTCAAACGAAAGAAATTTTGTGATTTTTCTTTATAAA
CCTTTTTCGACATTATGCCATATCTTATAGTCTTTGCTCAAGTTTTCATG
AAGTTTTATGAGTGAAAATCCTACCTTAAATCACTTTCATTTTTAGTTTC
TTATTTTCAAAAAGACTTTATTTTTAGGAAATAATGGCTTCTGATATAGA
AATAAATAAATTGAAATGCTGCTCATGTGTAAATTTGAATCAGATTGGAA
CTTTTTTCTTGATGCTACACAAGAAAACAGTCACTTCTGGATCTGTCGCT
GTTAACTTTTAACAACGGTCAGTGGTATGGTGAGACGTGGTATGATTTTC
AAACTCGACACATAATTATTTCAAGTAAACTGATTCTGGAATTTGTTAAT
GGACACTAAAATGGGGATCATGTGTAAATTTGAACAAGATTGGAACTTTT
TCAATGATGCTACGCGTGAAAATGGTTTTTTCTGGATCTGTCTCGTTTGA
TGATTGGTGGCTTGATTTTTCAAACTCGACACAGAATTATTTCAAATAAG
CCGATTATGGAATATGTTAATGGAGACTAAAATGCAGCTCTTGTGTAAAT
TTGAACAAGATTGGGACTTATTTATTTTATACTTTTCTAGGTTTGTACTC
GACATGAATCTTTGGAAGTCAAATATTATGTCAAATGTTACAAATGATTT
AAATTTCCAATATTCTTTAATATATATATATATACTGTAGGATATACTGT
TAAATTTCACTATGGTTTTGGACAAATTTTAATGATATTTGATTGTTGTC
ACCTAACAAAATTGTTATATCTTATATACAATAAATTCGAATAGAACATA
AATGTTCACAGTCGCTTGAACATTTGGAGAGTGAAGGAAGGTTATCTTTG
CTCCATGGAGTTCGACTGCCCCGGAGGCACAAGAGAACTGAACTCAAAAG
AGCAAAGACCACCTTTCTTCTAACCCAAGTTGTTGTGACTGACAAAGGTT
CATCTCGTTTTTCGGATAAAAGTTCACTGAGTCTTTTATAGAAGCACTTG
GTTTCTCTTCCCATGCCGCCCATAGCGGTTAAAACAATAGGAGTGAATGA
GCCGTGCTCAATTTGTAAAATTCTCGAATTGTATACGCGCTTCTTTTCTT
TCTCGTTCGAGTCACATGCTTTGGAAATAGTGGAATTCGAGAACCGTTTG
GCGATTGGGTTGAAAACCCTTACGTCAAAAAAATGCCTTCTGTCCTGAAA
TCCGAAATCCCCTAGCAGCGATATCGAGACGAGCGTTGTCTTGAATGTTC
NCGGTTCCCGTCTTCGCAAACGCCGGTTAACGGTTTTGCTTGCACACCAA
AAGCCTTTAAAATACTGTTGACTTTGTGTCGAAACTCTCTCCTGACAAGG
GGGTCAAAACTGGTTCGACCTTAACGTCTTTACAAACTTGTGCCAAGAGA
GTTGCCGTGGTGTCACGGATTGAGTTGTGTCTCTGTGTGATAAATCCACC
TTTTTTGCATGATAGCGCGTGGTCCAAGTTGAATTGTACACCACATGCAC
AAGTGGTTGGTAGACGACTAAGTTGATGACCATATCGTATCTTAATTAAG
TCCCAGAATGATTGTTTGTCGATCTGGAAACCTTCATCTCTGATCAGGAG
TGTCGATAGCCAGAGGGATGCTCCAGGTTCTTGATTTATTTCGATCAGTC
TTTTCAACTCGTCAGATGATTGGCTTTTGATGGTGTCTAGCTTTTGACGG
TTTATTTGATTTCGTTGTTTCTTGAAAGACAACTTCAGTTTTTTGATCTC
GTCATTGTCGATATCGTTCAGATGGTTTTGTGTTTTGATGTTAGTCTGGA
GCTGAAAGACAACTTCAGTTTTTTGATCTCGTCATTGTCGATATCGTTCA
GATGGTTTTGTGTTTTGATGTTAGTCTGGAGCTGTTGCGTGAGCGCTTGT
GAGTTGGAGAACTCTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAT
GAATTTGGTGGTAACAATTTCGTCCAGTCTTTTGAGTTGTTCTTGGATGT
TAGGAATCGTCCTCAGGGTGAAGCTTAGCTTGTGCTTGTACCCTGATGGG
AAGCATGTGTAAGCCTCTTGTGGAGCAATCTTTGCAATCTCCGAAAGAGT
CTCGATTTTTCTAATCCAGGTGTCGACTTTTTCGTTGACAAATTCTTTGC
GGTATTTTTCAGAACCAATGGCTGCCCCGAGGTGTTTCTTTCCCTCGGTG
GTGATTTGAATGTCAGTGCCTTTGAAGATCTGTTCCGCTTTTTCGAGATG
TTCTTGCTTGACGATGATCCAGGTCTTTTCTGCTCGTTGGAAGTAGCCGT
ATTTGGGTCCCCAATGAACGATGGTGTCCCACATTCGTTTGAGTCCTCGA
AGGGTGCCTCCTCCGAAGACATCGTCGGCATACCCAGCTGCTTTCGTCTC
ACTGTTGTGGTCGCGAAGCTCTCAAACCGAGTGGTGGATGAGTGGGATTG
TTACGATTGCGTATATTAAGCCGGCTATAGGATCGCCTTGAGTGGTACCT
TCTGAAGACGGGATTTCTAGTCCCCCAATGATGAAGAGGCGGGATGGTGA
ACTGTATCAGTTTATGGTGAACGTAGCAATGGATGAATATATGTTGAATA
CGGTGCTAAAGGAACCGAATACTATAGGTCATAGTCCTAAACATCCTTTC
ATTGTTGTGGAAGGTCTTGATGGTACAGGTAACTTATCTACTGAAAAACT
AATTTTCGTGGAACTTGTTTTCGCGGGAACTAATTTTCGCATTTTTTGGG
TGTCTAACTATTTTTACTATAAATTTCGAAAACTAGCTGATTTTTTATCT
TGGTCTTATGTCCCATGAATCGAAATGTAGAAAAATACCGATGGAAGACT
ATATTTTGCAGTAGCTTGCAAACAATGATTTGTGCTTCAACTCTACAGGG
AAATCCACCATGACACAGAATTTGGGTAAATTTCTGGGAGCTGAAATTCT
CGGCACACCGCCAGCGTCGATCAAGCATATACGTAAATATTTTGACGTCT
TTCCTGAATTATGCCGCCGTTCTTTTTACGCTTACGGGAATTACTTAGCT
GCGGAAGAAATAATACAAATTCTACAATCATGTCCAGTCGTTCTTGACAG
GTTTGGTATTTAAAATATCGAATTTAGATTTGATATACCTCTGATGATTA
ATGTTGCTTCGTTGGCATTTTAAAATTCCTTAAACATAATAAATTACTTG
GACTTTTATAGGGATGAGCTGATGCTCAGATTTCCGATAAAGAAATCTAT
GAAGGTTAAATAAAACACATTTAGACTTTCGTTCGATATGGAGTACGTAC
CGAACTTAAGTCTGCTCCGATATTAATTTGTAGCTAAATCAATAATGGCT
GTAATTTGATGGACCTAGAATCGTAGAAGTCCGTGTCGTGCTCGTTGAAA
AGATATTTTGAGTGAAATGTGAAATGAGCTCTCCCAGAAAAAAAAAGATT
ATGGTGGGGGGGGGTNTAGATGTCCGTGTCGTGCTCGTTGAAAAGATATT
TTGAGTGAAATGTGAAATGAGCTCTCCCAGAAAAAAATAGATTATGGTGG
GGTGGTGGAGGATATACCTTTTTTTGGAAATTTACCCCCGGACATTGTGA
CTTCTAACCCCCTGGACAAGCATCAGTTGACCCCCTGGAAATTCAAAATT
ACCCTCATACAGAGCAAAGCTACCCAAAAACAGTGCAAGTTTACGCCCCT
GGACAAGGCAAATTTTATGGATTTTTCACTACCCCCGGACACTATATCCT
CCACATATTCTGGAAGAGCCCAATGGATGAAACTAAAATGAAAAATAAAA
AGCAATTGTGGACATTTTGGTGAATTTCTGATCGCATAATCGATTCTAAC
AACTAACAATTATAGTGTAAAAAGATATTTTAAACCATATCACGTATAAT
ATATGGTAACTTCTTATAAAAATTGTAATAACATATTAACAGAAAAAATA
ACATCAGACCAAAAATGATATTAGGAAAGTATGATTTTACAACGTACCAA
TCAAGATTTTCTTTCTTCTTATAAAGGGCGTAACCACAGCCAACCAATAT
GAAGATGTAAAAGAAAAATAGATAAGTGGTCCTGGAAATGTCTCGTCGTG
GAGGAGGGATATTTTGAAGAGTTTTTATGCTAGTTATTATTGATTGGTGC
AGCATGTTCAGTTGAGCAAGAATCATTTCCATATCCACTTCAGTATATTC
AATACTGGGGTCCAGTGCCTTAATTGCATTTTCTCTAATAAGTCCATCAG
CGGATGTCAAATTTTTTAATTTGTCTCTGAGTTTCTTACACACATGTGCG
CTACTTGGAGCATCTAAGTATTTGACGTGCAATGGAACAATCCATGAAGG
TCCGTACTGAGCATACATGCGTTCTTTAGCATCTTTATGGCAAGCAAGTT
TCGCCGAGTCCATATAACAAGAGCACATGTCCCTCATTGTTGGTCTTGCA
CCTTCATCTGTCATCATCTCGTCTGCAATCCATTCATTGAAAACCATATG
AACTTGTGGACATCCTTTCACTGTCCAATGGACTTCAGCATATATGACAT
CTGCTGTTTTCCACATTGAAATACCTTTAAAAACTTTACGTAACTCGGCG
TAAAGTATTCCTTGTGGGATATCAACGTACATATCCACGTCTCCATCTGA
TGATAGACAAGTACTCTCTCTTAACACACCAAGCTCTGTTCCACTTCTAG
GGAAATAGATGGCTCCCATTCTATCCAACTGTTGCCATAACTGCTGGTGG
ATTTTCGAACATCTTGTTGATTTTTTGCGCTCTTGTCCGAAAGTGCAATT
CGGACGTATGAAATCAGGACCTGGTTTAATAGCTGGCCTCCACTTCAACC
TTCGGTGGGGATAATCCGTATAAGTGTTTCTAGCGTTCGCATGCCACCAT
CTATGATAAAAGGAGAAAGAAAATTTTGCTTGACTTCACGACTTGTTATA
GGAGTACGAGACTTTGGCATTTGTCAACTCTTAGGTGTATTGAGAGATGC
CGGGTATATATGTGCAAGGATCGGGTTTTTACCATCCATATATGTTGTTA
TTATTATTATTACTTAAGTTTTTTAACTGTTCATTATTTCTCATTAGGAA
GGTATAGGAAAAGGATTTCTTTATATGGTTTTGATGAAGTTGAGACTTGT
TAGACTATATAAGAATTGAATTAATATTAACCCCTTTGGGATTACCCAAT
GGTAACTTTGAATTTTAAATTGTCATTATTGTCCCATAGGAGAGATAGAA
CTTATTACGTATAAAACGAGGGAGGTTCGAGCTTTTAAGGTGGTCCTTTA
AAAATATAAATGTGGGTGAAACCCTCTACAATTCTTCCGTGGTTTGATAG
AAAACATTTTCAACTGTGATGTGACTTTTCAGAACTAGTAGCTCTAGAGT
TACAATTAAAGTTAGACTTTTATCTTTTTAGTAAAGCAAATACCTAGTTT
AACTGATATTTGGCTTGGTCTCAGTAGGTCGGAAGTTGCTAAAGGTCTAA
AGTTTTTGTGAGTCTCGGGTATATACAATTGTTATGAAATGTTACCTACC
TCAAACATTTGTCTGACCATCTATCCCTGATTACACCACTCAAATTAACG
TTTTGTACATGATGTAAAAATCTTGGATACCATTTCTCTTTTTTCACCTT
GTTATTATTAAAATAACGGGGATAAGGACAATCTCCATTCCAGTTTTCTT
CGTAGTAATCATCTGATTGGAACTCTCTACTGGCTGTTGTATTTTTGTTG
CTTTCTGTTAAGAGGTTTTAACTCATTGTTGATATTTTCAGTTGTAGGCG
AGGCTCTGGGTTTCTCAGCTGCTTTTCTCGTGCTATGCAGAATCACCAAA
GATAGGAGTAAAACAACACCTACAATTAAAAAGACGTGCAATTTCCGTTT
CATTTCTTATTTTCCTCGATTACTCAATTCCTTTTCTCAGATACTGTCAA
ACGAATTTATCAGCATCCAGGATTTTGATAATTAAAAATCTGCTAAACAT
CAGAGAAAATAAACAGTCCAGAGTAATTTCAACTATCATACGCATACACA
TCATACACATCATCTACTTAAGATTTATGTTTGACAATAGAATAATACAA
TTGGATTAAAAAAGTTTGTATTCATGATATGCACCATTGAAATGTCTTCT
ACGGAACTAACAGGTGATTGGTTGAAAGTGACGTATTGACTGACTTTACG
TCACTTACAACCAATCAGCTGTTGGGTTTGCGGTTTTCCTTTTTTTTTCA
ATCAATATTAATTACTACGGCTTACTTACGGCTAATTACTTTTTACCGCT
TTTGTTACTATCTTTTTCACAATACATGTAGTATAAAACTTGCACAGCTG
GGTATTGTACCTTCAGAGCGAAGTCAAATTAATTCTCTTTTTTTGGGGTT
AACCTACTTAAAGTATATAAGAAAATTGTTACTATCTTTTTCCTACCTAC
TTAAAGCCTACCTACTTAAAGTATACCTATACCTACCTACTTAAAGTATA
TAAGAAAATAAAGTTAAGTACAGTCTTGTTTTGTAAGCATAACGTTCATA
AGTGCACTATGTGTGAAAATTAGCAAAAAATAAGCATAGTGCTAAAAGCA
TACCATTCAAATTTTGTTTTGAAAATGAGATCAATGAGATAAAAATATCA
GATATCAGCCAAAATTGACCATGTTTTGACAACACTTTCATCTGCATAAA
ATGAACAAGCATAATTTGAGGATGAAAATTAAATTTTTCTAAGCATAAAG
AGCCTCATATGCTTATAAAGTAAAAAGAGTTTACCACCCCAAAAAATTAC
TAAAAAGGGCTTTTCCAGAAAAAATTTTAATATGGGGGGTGGAGGATATA
ACAATTTTCGGTGATTTGCCCCCATGGACAAGTGACTTTTGGCACCCCGG
ACAACGTGTTTTACCTCCCGGACAAGTATTAGTTGATCCCCCGGACATCC
CAAATTACCCCCGGACAGGGCAAATTTACCCCGGACAATATAAAGATATT
TTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTGGACTTTG
TGAAAAACTGGATCATTAATTTTTTCTGATTTTTTGTATGAAAGTAGGTA
AAAGATGGCTCAAGCAGATTTTTGTAAAAAACGAGATTTTTTTTTTTCAA
CAACAATAAAACACATTCTCATTCGAATTCTATCAAATGTACAGTCTTGT
CTCTTTTCATTTAATGTTATTATGTATGCAGACCTTCACACGCATCTACA
CTATTCTAATGATGTTGTTGTTTAGGTATTATCACAGTACAACGGCTTAC
GCGATTGCTAAAGACTCTGGATTCGGAATCGAGAAACATCTACCGTCTAA
AGGCAATCCTTTATATTCATGGCCTAATGATTTGTTGCGACCCTCCGCCG
TAGTGTTTCTTACGACAGAAGAGAAGGAGCGTGATGAACGAATGAATATA
AGAGATGAACGCACTGCGGAGGAGAACGAGTTGAGAGATAGCCAAATGTT
TCGTAAAAGGTTAGTGAATACTTGCGTAAATAGAAGTCGACGTATTTATG
AATCTTCCTGTGATTCGAACAAAACAATGGATTATCAGGTTGGAAAATAC
TTTCCGTGCAATTTAAATCCTTTTCAAATTCATTTTTCGAATTCCAAATT
TCCTCCCTTGAATTAGTCAAACGGATTGATATCTTTCTACAAGGATTAAA
CCATTTGTGTGATTTATTAGTGATAATTATAAAAAATTAATCATTTTTAT
CATCATCTTGAGTGAATGATCTTCTTCATCAAATAGGAAAGACATCGCTT
TTTAACATTCTATTATTACTGACAGTAAGAAAAAATTTTTGGGCTAATTA
TGGTAAGTCCTTCATGAAATTTGAGCAAATTCTAAGATGAGCTCAATTTT
CAACCTTTACAGGATAATGGAAGCATATCGTAGAATTAATTTGGAAGACG
GCTGGGTAGAAGTCGATACAGGTGGTACTCAAGAAGAAAGTTTGCAGAAA
GCTGTCAATGGATTGAAACAGATTGGTGTACTTTGAGTTTGTAATCATTA
GAGGTATATCGATCATCAAATTTTAAAAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042263XLOC_042263Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067695-exon-scaffold_472-1575043694:376837..377439TCONS_00067695-exon-scaffold_472-1575043694:376837..377439Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1575043694:375132..375255TCONS_00067695-exon-scaffold_472-1575043694:375132..375255Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1575043694:374723..374924TCONS_00067695-exon-scaffold_472-1575043694:374723..374924Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1575043694:362381..362614TCONS_00067695-exon-scaffold_472-1575043694:362381..362614Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1575043694:361808..361977TCONS_00067695-exon-scaffold_472-1575043694:361808..361977Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1510915933:376837..377439TCONS_00067695-exon-scaffold_472-1510915933:376837..377439Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1510915933:375132..375255TCONS_00067695-exon-scaffold_472-1510915933:375132..375255Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1510915933:374723..374924TCONS_00067695-exon-scaffold_472-1510915933:374723..374924Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1510915933:362381..362614TCONS_00067695-exon-scaffold_472-1510915933:362381..362614Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1510915933:361808..361977TCONS_00067695-exon-scaffold_472-1510915933:361808..361977Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1491911889:376837..377439TCONS_00067695-exon-scaffold_472-1491911889:376837..377439Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1491911889:375132..375255TCONS_00067695-exon-scaffold_472-1491911889:375132..375255Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1491911889:374723..374924TCONS_00067695-exon-scaffold_472-1491911889:374723..374924Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1491911889:362381..362614TCONS_00067695-exon-scaffold_472-1491911889:362381..362614Clytia hemisphaericaexon
TCONS_00067695-exon-scaffold_472-1491911889:361808..361977TCONS_00067695-exon-scaffold_472-1491911889:361808..361977Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_472supercontigscaffold_472:361808..377439 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.6121	12.3577	10.4736	6.90863	0.00171511	1.4972	1.4443	0.0660328	0.86871	2.09223	6.63096	4.02858	3.47974	5.83741	4.91123	5.13161	2.47555	5.61086	1.2399	6.93742e-10	4.58692	4.79311	14.9074	10.6838	7.82455e-07	0.379377	6.74036	4.79625	5.94297	6.03887
Blast
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BLAST of TCONS_00067695 vs. Swiss-Prot (Human)
Match: CMPK2 (UMP-CMP kinase 2, mitochondrial OS=Homo sapiens GN=CMPK2 PE=1 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 1.313e-38
Identity = 92/245 (37.55%), Postives = 144/245 (58.78%), Query Frame = 1 
Query:  529 HPVFEDPKFAPVYKNFDQAKTNLSKVCTRHESLEVKNMLNTLLKEPNTIGHSPKHPFVVVEGLDGTGKSTMTQNLGKFLGAEILGTPPASIKHIRKYFDVFPELCRRSFYAYGNYVAAEEIIQILQSRPVVLDRYYHSTTAYAIAKDSGFGIEKHLPSKGNPLYSWPNDLLRPSAVVFLTTEEKERDERMNIRD-ERTAEENELRDSQMFRKRIMEAYRRINLEDGWVEVDTGGTQEESLQKAVN 1260
            HPV  D   + V+ + + A+  L + CT     E + +L+ + + P  I    K   V +EGLD TGK+T+TQ++   L A +L +PP+ I   RK FD  P + RR+FY+ GNY+ A EI +     PV++DRY+HST  YAIA +   G++ HLP   +P+Y WP DLL+P  ++ LT   +ER +R+  R  E+T EE EL  + +FR+++  +Y+R+    G   VD   ++E+ LQ  ++
Sbjct:  201 HPVVPDLPSSVVFPDREAARAVLEE-CTSFIP-EARAVLDLVDQCPKQIQKG-KFQVVAIEGLDATGKTTVTQSVADSLKAVLLKSPPSCIGQWRKIFDDEPTIIRRAFYSLGNYIVASEIAKESAKSPVIVDRYWHSTATYAIATEVSGGLQ-HLPPAHHPVYQWPEDLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSVFRQKVEMSYQRME-NPGCHVVDASPSREKVLQTVLS 440
The following BLAST results are available for this feature:
BLAST of TCONS_00067695 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMPK21.313e-3837.55UMP-CMP kinase 2, mitochondrial OS=Homo sapiens GN... [more]
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