TCONS_00006690 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006690
Unique NameTCONS_00006690
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1277

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006690 ID=TCONS_00006690|Name=TCONS_00006690|organism=Clytia hemisphaerica|type=transcript|length=1277bp
GAGCAGTCCTTCAAGAAGATTTTGATCGATGATAAGCCGTATTTTGTTCA
ATTCAACCAAAACAATGAAGGAGATATCAGTCTGCAGTTGACCAATGGTA
ACCATATGTTACTTGGAAAGTTGCCACAGAGGGACATCATACAAATGGCT
AAAGGTCTTGATATGACTACAAAGAAATTGGAAAACCTTCTGGCACAATG
TTTAGCTTCAAAAGACGTTCAAGACTTTGAGTATCAATTGACTGAATCCG
ATGAAACTACCTCCAAGtttcaacTTGGAAGTGTACCTTTGAAACGAAGT
GAAAATTCATCACAAAGAttggtttcaatgttggatCATTTGACTTCAGA
ACTCGCCAAATACAAGAAAGAAGTTGAGAAAGTTCGGAATATCAACAACA
CAATATCTCAAGAACAAGAACACATGACCCAACGCTTGAAAGAACACATG
GAAACACATATCAATATGGAGCAAGAACTTTACACAAAGTTTTCCATGGT
ATTAAATTCGAAGAAAGCTAAGATACGAGAATTTAAAAAGACAATTGAAT
CTGGTGGTGGTAGTAGTGCCAAACTTTCAAATATTCCACAGAAAGATGCG
AAACGGTGCCTCGTTGAGTCAGATGAAGACATGGAGACAGATGACGAAAA
GCAAACGATAAAAGACCATAATAAAAAGAGGAAACTTTCGAGCACAGACG
AAGAAGCGGATGAAGAGGAGAGAACAACACAAGAGGAGGAGAGAGGGGAT
GAAAAACACACTGCGAAGGAGGGAGAGAACATTCGTTTAGATGATTCGAT
TGGAGATGATGATGATATGCCGAGAAGGAGTCGAAAACGTATGCGTGCAA
CTAAACCAAAGACACCAGTGAGTAGCGTGTTACCTCGAACCACATCCCTT
CCGAGACCAAAGTCTGCTCAAAAATCTTCATCAGCTACAGGGTCAAGTCA
ACGAAGTCAGAGAAGTTCACGAAATACATCCAGTGAAGTTTCATTGGACG
AACTGCTTGATAACTTATGATGATCAAAGCTTTCTAGGCGTTTTTTAAAC
TCAACTCTACACAACTATTACTTTTTTAGCACCCGcacaattttttagaa
aaatattttcaattacagatatggtcaaagatataataaaaaatatttca
cgtGATTATAATATTCCTTAGCTTAAATCCATTTGATTTTGGAGGAACCA
AAAGAAACGAGCCGCAAAAGAATGaacagaaaatgtaaaaatcaactgtt
tttttacaatatttcgtTCTCTTTCAG
Run BLAST on NCBI

transcript from alignment at sc0000069:557417..569911-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006690 ID=TCONS_00006690|Name=TCONS_00006690|organism=Clytia hemisphaerica|type=transcript|length=12495bp|location=Sequence derived from alignment at sc0000069:557417..569911- (Clytia hemisphaerica)
GAGCAGTCCTTCAAGAAGATTTTGATCGATGATAAGCCGTATTTTGTTCA
ATTCAACCAAAACAATGAAGGAGATATCAGTCTGCAGTTGACCAATGGTA
ACCATATGTTACTTGGAAAGTGTAAGCAATTGTTTCGTTTTATTACAGTA
CACGTTTTTTATAAGAACAAACTACAGTGGAATAAATAGACTAGTAAACT
ATTCGTTGAAAACAGACCCATATACAAAAAATCAAGCTCCAAATTAAAAG
AATCGAAGGGGTGAAGTTGCGTCTCTTTTTTTAATTTCTACTTCCCTAAA
AAAAGGTTGTTTAATTGTACAACTTTTCTTAGGTTTTTGAGAATCCATCC
AACTTTTTTTGACTAAATGATATTTCATAGTAACATTGAACATGGGAACA
TATAAATAAATGAGCATTTCTAAAAACGTAATAAACAGAAAGTAAAATAA
ATGCAATCCCGAACGGGTCAGACATACAGAAATCTGTATGTCTCTCCTTA
CGATTTTAGGTGAAGAAAAAACGGCGTTGGAAGTAGCTTCTAGTCGGTTA
TTTTCCTTTTCTCTCACGTGCACTGAATATTTAATTAGTGTTTACATTAT
TTGATTGACAGTTACATTATAAGGTTATAAGTAATAACCGACTAGTTTAC
TAGTCTATGGAATAAATGGAATCACAAAGTGTTCAAGAAAATTCGAAAAA
ATTCGAATGAAATATCAAGAAATAACAAGAAATAACCGTGTAGCAACTTA
TTTAAAAAAACATCATGTAGCGATTGTAAGATACATGTTTTTTTTATAAG
CATATGTTTTTTTGGGAAACAAGCTCAGTTATGCATAGAGATATTTTAGA
CTCCGGCTCGAAGTATGTTTATCATATGCTTATTTTTCCAAATTCTGTCG
TTGCTATACATGAGGATAGGGAAATAAGTAATGACACAAAGAAACAAAAA
TTGCATTACAACGACTTCTTTTCCATCTATTAGAAAAAAAATTTCACTTA
CACACCTCAAAAGCAAGCTCAGTAATATGCTTGTAATATGCTTATTTCTT
AGACAAATTCAGGTCTCGGTATGCTTATAAACGTTACGCTTATAAAAAGA
AAAACATGTAGTTCTTTATTTCTTGATATGAACAAACTATAAGAACTGAA
GCCTTCGGTGCCTAAAATATCAAGAACATTTTAAGGCTTTGCGGACTCTC
TCTAACACACCCATGTGCTAAATAATGGGCACAAAATGTTAAAAATAAGA
ACATTTTAAGGCCAACAATGCAATAAGTTAAGAACATCTAAATGTTTCAG
GAATGTTGGATGTTGTTATAAAAAAGTGTATTAAGACTAAGAATAGTAGA
AAATTTAAGAACAGAGGTAAAGTTTAACAAAATTGAAATCAATTTCTGAA
TAAATCCAACCCAGATATATTATCTGCTAATCACAATCTTTGTTCTAGTA
AGGTACCTGAAATTCAGGCTTGAGGTTTATTATCTTTTACGATTCTTTGT
TGTTTCTTTTTTTACAAAAATATTGATTTCTCTTTTTCCTGCAATATTTT
TAGGCTCGGCGGAAGCGGGGAGGCACGGGAGGCTGAAGTTTTTGAGCAAA
ATATACTTTTTGGACCCACCCCGGTGGGGTGGAGGTCCTATAAATTCACC
TCTGTCATTCGTTAGTTACCAACTTTTCTCGAGATTGGCTCATTAGTTTT
TTCAGATTTTTTGCACAAAGATATGTAACTATAAACCCTCTAATTTGACG
GAGCCCGATTTTCGAAAAAAAATGTTTTAGGGCAAATTTGGGCCAAAAAA
CGGCTAAAAAAGGGTTTTTTGGACTTTGTGAAATATTGGATCATTGTTTT
TTTCTGATTTTTTGCATGAAAGTAGGTAAAGGCTGGCTCAAGCAGATTTT
TGTAAAAAAAGAATTTTTCAGCTCAAAAAAACGCATCTTTATCTATAAGA
ATCACTATCAATAAGCATACATCAATGTTCTTAGTCAAATNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTGCTCATGAGGG
CTTACTTTTGAAGAATATGTGTGTTTAGACATGAAATTTTGGTTGCTTGG
CGTGTTTTTATAGAAAAACTGGCAAAATTCGATATTTTTTGATAAGCACA
TTATCAATTACTTAGGTATTAGCCTTTATCGAGATTGGCTCTTTCATCCA
TTATGATTTTTTATACAAAGATGCATAACTATAAACCCTCTAATTTGACA
GAGTCCGATTTTCGAAAAAAAATGTTTTTGGGCAAATTTGGGCAAAAAAC
GGCTGAAAAAAGGGTTTTTTGGACTTATTGGATCATTGTTTTTGATGAGA
TGGATTTTTTTTGCTCACAAAGTCTTGAATATGAAAGAATATTTCAAGAG
CATGAAATTTTGGTTTCTAAACGTTTTTTTTTTTTAAGAAACAAGCGACT
AATTTTAATAGATCGTCACTATTTGTGTTCTAAATGATTGTTTAACGGCC
ATGCTCACGTAGATATCAATTATATGTGTTAAATGCATAACCAGGTAGGT
CCATAACATAAAAGTATCACTTGTTTTTCTCCAATTCGTGGCGAATTCTA
TCTCCTTTTCAGTCTTTAACCCCTCCACTTTTACGGTTATTTCGCCGGGC
CTAAATTTGCTCTTTATTTCTATTGGGATCCTCAAAAAGAAAAAAAAACG
ATTTTATATATTTTATACAGTGCCACAGAGGGACATCATACAAATGGCTA
AAGGTCTTGATATGACTACAAAGAAATTGGAAAACCTTCTGGCACAATGT
TTAGCTTCAAAAGACGTTCAAGACTTTGAGTATCAATTGACTGAATCCGA
TGAAACTACCTCCAAGGTATGGTACATTGTGGGATTGATGTAAAGATCTC
CTTTAAGAATGTGATTATAGCACTCTACACGTATGTACACTTCTGACCAC
TGCATTTACAAGTAAATCAAATTACCTAGCCAAATTATTGTATAATATTT
AGGGGAAAATTTTGGCATTTCTTAAAGGAATGTGTATTCAATGTTTTTTC
TAGTTGGTTTTAAAACAAGTTGTCGATGGCGGATTTAAGGTAGGTCCAAT
TATCATTTTATTTATGAAAGGGGTTTATAGTCTCGTCCACAGCCTCATCA
CGCCTTTATGAGGACAAACCATTTGATGGGGCTTTGAGTGAGAGCCAAAA
TATCAAGAACAAGTTGAGTATACTTTTAAGGCTTTGCGGACTCATCTAAT
TCTCAGGAAATTGACAAAGATATTAAAATTGTATAAAAATGGTAAAAATA
AGAACATTAACATTTTGAGATTTATTAAAATTCAAAAAGTTAAGAATATC
CGAAAACTTCAAAATTTCGAAGTTCGTATAAAATAACGTATACCTCAGTA
CATTACAAATTTCACCCCCTTCTATGATGTCCAATCATATTCATTTCCTT
TTCAAATTTTAGTTTCAACTTGGAAGTGTACCTTTGAAACGAAGTGAAAA
TTCATCACAAAGATTGGTTTCAATGTTGGATCATTTGACTTCAGAACTCG
CCAAATACAAGGTTTGTCTTTCAAATCATTGAATCGCCACAGTTGACTCT
CGCTAATTCGAGGGTCGGGGGAAAAAACAGGGAATCTTATTTGTTCGAAT
TACAGAGAGATTCGATTTATAGAAAGTATTTTATGAGCGTTTCTCCTCGA
CAGAAACTGGAAACAAGTTCGAGTTAAAGAAAGATGGTTAAAAGACAACC
CTTTCCTGCTCGATTATGTAAAGATCGATGGGTACGAAATGCACTTCCAT
AATCGAGACAATAAGCGTGGTGGTGGAGTTGGAATATACATCAAAGACAA
CATTAAACACAAAATACGCAAGGACATAGTCAACATCAACCCAGCTCTCG
AACACCTATGGGTTGAAATCGAGGGAAAAAACAAACACTCAAAGCTGCTC
TTATGCGTCGCCTATCAGCCGTACTTCACGCTCCAAGAAAAAACAGAATG
GCTTGAAAGCTTTGAGCGCATTATTGGAAATGCTACTCTAGATTGGACTG
GTAATGTTGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAATTTGTTCAGGTCGACGACAAGCAGTC
TGAACAAGGCAATGTTCAGTTTGGTGTACCACAAGGCTCCATCCTCGGAC
CGATCTTGTTTAATCTATACACTGTGGACTTACAAGACAACGTCGAGGGT
GGTAGTACCAACCAATATGCTGACGATACTACAACTTACGAACATTGAAG
ACCTAAAGAAGTACCAGCCGCAATCATCAGAATGACACAACGCCTAGATC
AACTCAAAGATTGGTCGACCGAAAACAATCTTGCGTTCAACAACAAAAAG
ACAAAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGTAATAAACCTTGGCTGGTTACCAATGCAACAA
CGGGTTGAATTCGAACTCTTAAAACTTGCCCACAAGTCGATTCATATGGA
GGATTTCCCATCATACCTAAAGGGCTTCCATCTGAGAGCTGCTGGTAGAC
CAACACGTAATGTTGAAGATATTGATTCTAATTATGTATGTAATGTATCT
GAAAAACTGTTTATTGGTAAGGCAAGTCGCCTTTTGAATGATCTCCCAAA
GGCTATTCGGGAAGAGGTTGATTCTATTAAATTTCGCAATTCTTTAAAAA
AATATTTATTAGATGTTAGTCTTGCAATATATATATGCAACATTAGTTTA
TGACACTCGACAAATTCGACATTTTAACAATCACTACTACTACTATAGTA
AGTCTTCTATACTAATAACAATTCAACGTCTCCAAAATTCTCCAATCCAA
GCTGCAATTTACTTCTAGTTTTGTCTATTTTCTTTTAAATCTCTAGTCTC
CCAAGTTGTCGATAAGATAATAAATATTTTATTTTCTATATTTCAAATTT
AAATTATTATATTTCTAGTACTTCATGTTTAGCCATTTTTCAAGAAATCG
AGTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTACCTTCAATA
GCCGATCACGATCTCACTTCTTTTTTTTTCACAAGCTTATTTTCAAGCAT
CAATCCCACATTCAACAACACTACTTTGGCTCTTCTTTTGTTCCGACAAA
TAATTATTGTTTAAGATAAATTTTTATTTTATTGATTTTTAATTTATTTC
ATATTTCTCAATCCAATTCTGATGAATACCGTCTGATACTATACTTAGTC
TCCACCATTTAGAATTTCTCCGAGTTCCAAGCCTTGCCTGCAGAGTTATA
TCTTTCAAAAGTGAATAGGCCTCACTGAAGAGATATATAGCTCTGTATTT
CAACTTTCCCAGATAGGGCAGTTGTACAATTTTATCCAAGCTTCAATTTA
TGATTTGGATCTCAATCGAGCGAATCAACTTTTGGTCGTAGGTATATTTT
TGCAAATTGAAAATTACATATAATTTTTTTTTTTTTTACATAATAATTTA
TTTATTTATTTAGTTTACTTATTATAAATAGGACGAATAGCCATTGAGAT
ATATGATTTAATAAAAAAAAAATAATAAAAAAAGATTCGAATAATGGAAT
AAGCGAGAGTTTATACAATAGAGTCTCTAACCTCTATAACTCGAATCTCT
ATAACTCGAATCTCTCTGTAATTCGACATGGTTCCGGGTCCCTTCAGGCA
ACAAATCCTTTTAAACAAGTCTCCACAACTTGAATTTTCCATAACTCGAA
CAAATCTGTGTTCCCTATGAGTGTTCGAGTTATAGATATTCCACTGTTAT
CTTATGAGAGGATAAAGTGAAGATAGGATAAGATATGATGTACCCCACAA
AAAAGATTACAAATACTGTTATTAGACAGGAAAATTAGATAATCACTATA
AAATATCGAGAATCCTATAAAAAAAATCCAATAGATTATTTTCTAGGCTT
ATTCAGGCTTATTGATTGATTCAGAGAAAGATGTCTTGATTATTTTAGAC
TTTCTCCTGGCGTTTATAATCATGGAAGAGCTTGTTTAACAATCATTGCA
ATATACCATGTGCTTATCATTTGGCTTATGTTTTCGTGTTTCAGAAAGAA
GTTGAGAAAGTTCGGAATATCAACAACACAATATCTCAAGAACAAGAACA
CATGACCCAAGTATCTACTTTTTTATACTAGAGGGGCACCAGACAATCTT
TCATGTCCTTTTAGCGTCCGGCTACCAGACACTGCCCCTTCTAAAATCAC
TAAAATGTTCGTAAACTCAGCTTTTTCAGTTGAAAAAATACTATAAAAGT
GCTCTTTTAGGCCATCAACAGACGCTGCCCTTATGACCTGGGCACTTTTG
GTATAGATTTTGCTGGACATGATTGTTAAAGGGTGACGAGGCTTCCCATA
TTATTTTTTGAAAAGCTGCTCATAAAATAGAATTTTGTTGTGTCTTTGAA
ATACTTAACTGCCACTTGTAAAACATCTCACACTTCATTGCTATAGCGAC
GAGAAGTAGGGTTTTTGATTAATTTATTTTCTGACCAATTATAGATTTTT
CTCTACAAAAAATTTAATTGGAGTGCATTTTCTGGTCTTCTTCAACTTAA
AACGTTCAAAATTTCTCCCCTCAGATGCGGTGTCACTAACCCAGCCCCCC
CCCAACTAGGGCACTGTTTACATATTGAGATATTGAACCTCTCTCTCCAT
TATTTTTCTTACAGCGCTTGAAAGAACACATGGAAACACATATCAATATG
GAGCAAGAACTTTACACAAAGGTTATCCATTGACAGTGGTGGATCTACGG
GGGATTCAAAATTTATGGTGGAGAGTGTTCCTTCTAGCTAGTCATTAGGC
TGGACTATTCTTGGTTTGCCGTCACCCAACCCTAGATTTTGGAGGTGGGT
CAGGCGATCGGATTTTGGTCATTCATGGAACTTTTGTCTACATTTTGTAA
TTGTTGAAGAAGAAAAATTCCCTTCGTCGAAATAGAAATAAAAGTTTTTA
GGTCGACAAGTTTAGAGATGAGTCGGTTGGCTGACGGCAAACCAACATTT
TTTTCAATCTAGCCTTATGAGGAAATGAAGACTTCCCGTCATAAATTTTG
ATTAGATCCGCCACTGAGATGTTTTCAAAATTGTTCCTGGACTACTTTGT
CCAGCTTTTTTTGTGAAGGAAATGAGACTTTTTAAAGCCTTGATTTCACG
TTTTTGTATTTTCACAACAGCTGAAAGAAAAAACTTGGAGGAATTTGTGT
GATATATATTAATATTATCCAAATTGCAATCAAAATACTCTAATTCGAAC
CTCTTTTATTCAAATCTTTCTGTAACTTGAACTAAGTTATTGGTACCCTC
AGCTGAAAAGTGGTTTAAATGACTCGCTGTAACTTGAATCATTCTCTAAT
TCGAAGACAATTTTTGTTCCCATTAAAATCGAATTAGAGGGCATCAGCTG
TAAAAAACAATTGTGATTAATTGGGTATGCCAAAGAAAGATAAGGTTACC
TAACCATGGATATTAAAGCTTCTGGTTATCAATAACTGTAGCTGAAAGGT
CGATTCATGATAAACCAATGAATTTTGTTCTCTTTTTAGTTTTCCATGGT
ATTAAATTCGAAGAAAGCTAAGATACGAGAATTTAAAAAGACAATTGAAT
CTGGTGGTGGTAGTAGTGCCAAACTTTCAAATATTCCACAGAAAGATGCG
AAACGGTGCCTCGTTGAGTCAGATGAAGAGTAAGAATAAAACTGTTATTT
TGACTCGATTAGTAAAGTGTGGTGTCCTGACCACTGACCTTTATGTATCC
TTGGACCAAGCTATATCCGCCATCTTTGATCGAAATTTTTTTTGAATTGG
TACCCGTGAAGAAGCCATTGCAGTGTTAGAAATTAACGTCTAACGCCGCT
ACATCATAAAAAGTTTTTGACGCAAAGTAGATCTAGCGCTCTCGATGCAT
TTACACAGCTATTGAGTAGTGTCGCCATTAGGGTACCACTTTTCAAAAAA
CTCCAATCAAAGATTTTGCTTGGCCAAGATTGAGAAACTTGGTCCAGGGT
ATATAAAGGTCAGTGGTCCTGACTAAAGGTACAATGCACCAGTCTTCTGA
GAACTTTTAAAATTTTCAACCCAATACGTCACTTAAACAATAGAAAAAGT
GACGTATTGAGTGGAATAAAAACAGAAAAGTTGCATAATTTTGTGAAGTC
ATTACAGTGGTGCATACACGTTTTTTTTTATAAGAACAAACTATATAAGA
ACATAAGGCTTCGAGGCCCAAAAATTTAAGAACATTCTAAGAACATTCTA
AGGCTTTGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGAACATTTTAAGAACATTTTTAGGCTTCAAAT
CCAAAAAACTAAGAACATCCGAAGGCTTCGAAAATTTTTGACGTTCTTAT
AAAAAAAAAACGTGTATCATGAATTCGTATTTTGACGCCCTTTTCAAGGG
AATTAATTGAAACAAGGACCTTTAAACTCTCTGATAAAATATCTCTTTTT
TGTTAAGATGAAATTCATAGGTCGAAAAAAGAACAAGGCGTGGGTCAGAT
TTTTGCAAAAAGTTGATCCACGCACCTATGCAAAAAGGTTTCAACCATCG
CACCCACTTCTACCCACGCAAATTAAATCTCCGCTAAATTTAACAAAAAA
ATATTATGTGAATAATCAAACCTTTTTAGTATATTTTATAGTAAACTTTC
ATCCATTTTAGTGTCTCCAAATTCCCAATTCGCCAAATTAAATACCCGCC
ATAATTAACCGTCTTAAGGTAGATTTTGATGGCTGAAAGATTTGATATTA
AAAGAAATTGTTTTATGTTTTGATGAATATGGCTATCTCATTTTAAGCAT
GGAGACAGATGACGAAAAGCAAACGATAAAAGACCATAATAAAAAGGTAA
AAGCCATTTTTTAGGAAACACTTTTCTAGGAAAAACTTCCACACCATCAT
TTAATTTTATCGATCAACCATTTCGATCGCAGTCGAATTCGCAATTTTGG
TTGTTGGAAAGAGTGAGGAAATCAGCTCAACACTTTAAGGACATCCAAGC
ACCCTTTTGAGGGATGCCTTCAAATTTGTCAGTTTTCGAATGTGCATGAT
GTATAAGATGCGTTCCGTCTTTGTTTTTCCCCTTAAATTTTGCATTGTCC
TGTACTTTTTTGTAGTACTTAGTGTGTTGATGACAGTTTCCTAATTTCTT
TCTACGCACGTTAGACTAGTTTAGACTCTATGTTTACTTAAAGTCGAGTT
ATCGTCAATTATATAATAACAATGGCCAGCTTGACAACTTCAGTTAAACT
AAAAAGGAAGCAAGTCCGAAAGAAAGACATCCTGGTTCCTTGATATATAC
CATATACCTTAAAAATGTTACACACACAAATGATGCACACAAGGATGTCT
TATTTCGGATCTGCTTTCGTTTTATTTTCTTTCAATTCATATATAGAGTG
GACTCTCTCTAATTCGAATTTCTTTTAGTTGAAAGTTCCTATAATTCGAA
TTTATTTTCTGTCTCCGTCAAGGTGATTCCTACTTTAAATTCTTTCTATA
ATTTGAATCTCTCCGTAATTCGAAATATTCTTAAGATTCCTCCCTCAAGC
TCGAATTAACGACAGTCCACTATAATCATGGTTTTTATTTACCTTACAGA
GGAAACTTTCGAGCACAGACGAAGAAGCGGATGAAGAGGAGAGAACAACA
CAAGAGGAGGAGAGAGGGGATGAAAAACACACTGCGAAGGAGGGAGAGAA
CATTCGTTTAGATGATTCGATTGGAGATGATGATGATATGCCGAGAAGGA
GTCGAAAGTGAGTATTTCCATACTTTATACCACGTGAATGAGTTTGTTAG
TTTTCTGACTGTTTTGATTTGTAGTAGTTAGTTTTTTTGTAATTAGGAAT
CGTTCCTATTTTTGAAACTTGATTTTTTGACGTCAGCTTTTTTAACACCG
TAAATTTCATGATAATTCAAAAAAATGTAACTTCTCAAAATTTCGACCAG
ATGTCTGTAATAGATTGAATAAACTATGTTTAAAATTTCAGTCCAAAAAA
ACAATTCATTCTTGAGTTAGAACATTTTAAATTTTGGGGTTTTTATTTCC
ATGCTTCATATTCCACTTGCTAGCAAGAAGAATCGAACGTAAGATTTTTG
CACGATTCTTTTTTTCTGAAATCCTTGTTCATAAGAACATGTATATGCTG
AAATTTTGGAGAAAAAAATGATACGACCAAATTAAAGAGGTGTAATGAAT
GCGTTTGGTACTCCCAGCTCTCATTTACATCTGAAATTTGCTTGAATCAT
GTAATTCTGAGTAAAGTAAGTTTTCAACCACGATATCTATTTCACAGACG
TATGCGTGCAACTAAACCAAAGACACCAGTGAGTAGCGTGTTACCTCGAA
CCACATCCCTTCCGAGACCAAAGTCTGCTCAAAAATCTTCATCAGCTACA
GGGTCAAGTCAACGAAGTCAGAGAAGGTATATTTTACCTATTTTTTTCGG
ATCTTTCAGCTATAAGAAAACTAACCCAACTTTTTATTGGTTGTTGAACA
GAACATGGGCCATAAGAAAATAATTCTTTACAATTTTTTTTGATTTGATG
CTCAATTTTTCGTAATTGAATTAAACCGACAATCTCATTATTTCCACGGT
CCTTTCCATAGTGCAATGTCTTTTTCAGTCTTTACATAATGGTACCATCA
AGGTGAATTTTCTATTTTCACTCTTTTTTTTAGTTCACGAAATACATCCA
GTGAAGTTTCATTGGACGAACTGCTTGATAACTTATGATGATCAAAGCTT
TCTAGGCGTTTTTTAAACTCAACTCTACACAACTATTACTTTTTTAGCAC
CCGCACAATTTTTTAGAAAAATATTTTCAATTACAGATATGGTCAAAGAT
ATAATAAAAAATATTTCACGTGATTATAATATTCCTTAGCTTAAATCCAT
TTGATTTTGGAGGAACCAAAAGAAACGAGCCGCAAAAGAATGAACAGAAA
ATGTAAAAATCAACTGTTTTTTTACAATATTTCGTTCTCTTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003742XLOC_003742Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006690-exon-sc0000069-1575043694:569791..569911TCONS_00006690-exon-sc0000069-1575043694:569791..569911Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1575043694:567046..567191TCONS_00006690-exon-sc0000069-1575043694:567046..567191Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1575043694:566351..566449TCONS_00006690-exon-sc0000069-1575043694:566351..566449Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1575043694:562502..562567TCONS_00006690-exon-sc0000069-1575043694:562502..562567Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1575043694:561891..561947TCONS_00006690-exon-sc0000069-1575043694:561891..561947Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1575043694:560933..561072TCONS_00006690-exon-sc0000069-1575043694:560933..561072Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1575043694:559566..559614TCONS_00006690-exon-sc0000069-1575043694:559566..559614Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1575043694:558655..558812TCONS_00006690-exon-sc0000069-1575043694:558655..558812Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1575043694:557986..558114TCONS_00006690-exon-sc0000069-1575043694:557986..558114Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1575043694:557417..557728TCONS_00006690-exon-sc0000069-1575043694:557417..557728Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1510915933:569791..569911TCONS_00006690-exon-sc0000069-1510915933:569791..569911Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1510915933:567046..567191TCONS_00006690-exon-sc0000069-1510915933:567046..567191Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1510915933:566351..566449TCONS_00006690-exon-sc0000069-1510915933:566351..566449Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1510915933:562502..562567TCONS_00006690-exon-sc0000069-1510915933:562502..562567Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1510915933:561891..561947TCONS_00006690-exon-sc0000069-1510915933:561891..561947Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1510915933:560933..561072TCONS_00006690-exon-sc0000069-1510915933:560933..561072Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1510915933:559566..559614TCONS_00006690-exon-sc0000069-1510915933:559566..559614Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1510915933:558655..558812TCONS_00006690-exon-sc0000069-1510915933:558655..558812Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1510915933:557986..558114TCONS_00006690-exon-sc0000069-1510915933:557986..558114Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1510915933:557417..557728TCONS_00006690-exon-sc0000069-1510915933:557417..557728Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1491911889:569791..569911TCONS_00006690-exon-sc0000069-1491911889:569791..569911Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1491911889:567046..567191TCONS_00006690-exon-sc0000069-1491911889:567046..567191Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1491911889:566351..566449TCONS_00006690-exon-sc0000069-1491911889:566351..566449Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1491911889:562502..562567TCONS_00006690-exon-sc0000069-1491911889:562502..562567Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1491911889:561891..561947TCONS_00006690-exon-sc0000069-1491911889:561891..561947Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1491911889:560933..561072TCONS_00006690-exon-sc0000069-1491911889:560933..561072Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1491911889:559566..559614TCONS_00006690-exon-sc0000069-1491911889:559566..559614Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1491911889:558655..558812TCONS_00006690-exon-sc0000069-1491911889:558655..558812Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1491911889:557986..558114TCONS_00006690-exon-sc0000069-1491911889:557986..558114Clytia hemisphaericaexon
TCONS_00006690-exon-sc0000069-1491911889:557417..557728TCONS_00006690-exon-sc0000069-1491911889:557417..557728Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000069supercontigsc0000069:557417..569911 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	1.44097e-09	2.05854	1.23245	0.412298	1.01036	1.72029	2.62976	7.58989	3.76504	5.52344	5.93395	0.00303981	0	1.74275	3.342e-07	0	8.20271e-08	0	0.00517432	6.70233e-09	0	4.86729	3.63459	0.840802	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006690 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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