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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006713 ID=TCONS_00006713|Name=TCONS_00006713|organism=Clytia hemisphaerica|type=transcript|length=1487bp
AGATGAGAAACAGTAGTTTAACTGTGTCTTTAATGTGTTAAATTTATCAT
TACTCTTGTTTTAAAATCTATATCAATCGTGTTACATAAATATTCCAAAA
TGAATGGTATGGAGAGTAGTAATAATGGATGCCTAGATAACATCATCGGC
ACCAGTGATCACGATTTCACTCAAAATGGCGAatataaagattttgaaaa
tgctGTGTCACTTAATGTTCCAACGAGACAAAAATCGATCAAAATGGCTC
ATCGCAAAACGATTGCCTTGATTGCCCATGATAAATATAAACCAAACTTG
ATCAAATGGTGTCAAAAATGGAAACacattttgaaagaatattATCTTAT
CGGCACTGGAACAActtcaaagaaaatcaacaaagagACTGGTTTGGACG
TCCAAGGGATGTTAAGTGGACCTGATGGTGGGGACCAACAAATTGGCGCT
CGAATCGCCGAGCACCGTTGTGATTTCTTATGCTTCTTTTGGGACCCGAC
GTCAGCGGCCCCTCATGACCATGACGTCAAAGCTTTGTTTCGAATTGCAA
CGTTATATGACGTCTTGATTGCGACAAATCCGTCGACTGCAGACATGGTG
ATTTCGAATCCTGTTATGTCGTGCAAGAAAGAGGGATGAttatttttact
tattttaaACCTGATTTTCAACTTCTTTTATTCGGAGAGAACCCGATAAG
GATGAGATTTTGACTCTAAACTACTTTATTAAGGTAGAATTTGTTTATCA
TTTTATCGAGTTTAAAGAAAATTGTATTaattgtgagcatttttgtctac
ataaatttgattttcaacttcttttttttgaaataatccaATAAGAATGC
AAAATTAAATTACATTATGGAGATACTATCGTTTTGtgtaagattcccat
ttccacACTATGATTCTTATCACTTTCCCAGAATCTTCCCACTTTTTTTT
CCGGGAAAACCAGCATGAGATCGaaaagggtttgtttctaaaggtacgaa
aaatcttgtgtttactcacgaaactgcctaactttccaAAGCTCATTTTC
CAACTACCCGAAGTCCTTTGTttttttccgctagaaaagtggaaaaggag
tcttagtgcagaaatgggaatcttatacaaaacgacgaTAGAATCTGTTT
ATTATTTCATTGAATGAAACTTTGTATTAATTTTGtggattttcattttt
atgaattATACCCCGCTTTTTCCTGAACACACTGTAGTGAAGCCATTAAA
TCCTACCTTAGTTGCACGGCCTAGCAAGCTCCGCTGTAGATCTCTCTCTT
TATTTTCAGTCTTGCAGCTGAAGCCTACCTGAAGCCAGTTGCACCACCTC
TTGATTTTACTGTGACGGACATTAAACATCGATGATTATCTCTTTTGctt
tatctttcagaaaaaaaatagttAGATATTTTGCATTCGAATGTACTTTC
ATCAAATGTATGTCTTTGTGAATATCATATGAACCTG Run BLAST on NCBI protein sequence of TCONS_00006713-protein >TCONS_00006713-protein ID=TCONS_00006713-protein|Name=TCONS_00006713-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
MNGMESSNNGCLDNIIGTSDHDFTQNGEYKDFENAVSLNVPTRQKSIKMA
HRKTIALIAHDKYKPNLIKWCQKWKHILKEYYLIGTGTTSKKINKETGLD
VQGMLSGPDGGDQQIGARIAEHRCDFLCFFWDPTSAAPHDHDVKALFRIA
TLYDVLIATNPSTADMVISNPVMSCKKEG Run BLAST on NCBI transcript from alignment at sc0000069:507879..509365 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006713 ID=TCONS_00006713|Name=TCONS_00006713|organism=Clytia hemisphaerica|type=transcript|length=1487bp|location=Sequence derived from alignment at sc0000069:507879..509365 (Clytia hemisphaerica)
CAGGTTCATATGATATTCACAAAGACATACATTTGATGAAAGTACATTCG
AATGCAAAATATCTaactattttttttctgaaagataaagCAAAAGAGAT
AATCATCGATGTTTAATGTCCGTCACAGTAAAATCAAGAGGTGGTGCAAC
TGGCTTCAGGTAGGCTTCAGCTGCAAGACTGAAAATAAAGAGAGAGATCT
ACAGCGGAGCTTGCTAGGCCGTGCAACTAAGGTAGGATTTAATGGCTTCA
CTACAGTGTGTTCAGGAAAAAGCGGGGTATaattcataaaaatgaaaatc
caCAAAATTAATACAAAGTTTCATTCAATGAAATAATAAACAGATTCTAt
cgtcgttttgtataagattcccatttctgcactaagactccttttccact
tttctagcggaaaaaaACAAAGGACTTCGGGTAGTTGGAAAATGAGCTTt
ggaaagttaggcagtttcgtgagtaaacacaagatttttcgtacctttag
aaacaaacccttttCGATCTCATGCTGGTTTTCCCGGAAAAAAAAGTGGG
AAGATTCTGGGAAAGTGATAAGAATCATAGTgtggaaatgggaatcttac
aCAAAACGATAGTATCTCCATAATGTAATTTAATTTTGCATTCTTATtgg
attatttcaaaaaaaagaagttgaaaatcaaatttatgtagacaaaaatg
ctcacaattAATACAATTTTCTTTAAACTCGATAAAATGATAAACAAATT
CTACCTTAATAAAGTAGTTTAGAGTCAAAATCTCATCCTTATCGGGTTCT
CTCCGAATAAAAGAAGTTGAAAATCAGGTttaaaataagtaaaaataaTC
ATCCCTCTTTCTTGCACGACATAACAGGATTCGAAATCACCATGTCTGCA
GTCGACGGATTTGTCGCAATCAAGACGTCATATAACGTTGCAATTCGAAA
CAAAGCTTTGACGTCATGGTCATGAGGGGCCGCTGACGTCGGGTCCCAAA
AGAAGCATAAGAAATCACAACGGTGCTCGGCGATTCGAGCGCCAATTTGT
TGGTCCCCACCATCAGGTCCACTTAACATCCCTTGGACGTCCAAACCAGT
ctctttgttgattttctttgaagTTGTTCCAGTGCCGATAAGATaatatt
ctttcaaaatgtGTTTCCATTTTTGACACCATTTGATCAAGTTTGGTTTA
TATTTATCATGGGCAATCAAGGCAATCGTTTTGCGATGAGCCATTTTGAT
CGATTTTTGTCTCGTTGGAACATTAAGTGACACagcattttcaaaatctt
tatatTCGCCATTTTGAGTGAAATCGTGATCACTGGTGCCGATGATGTTA
TCTAGGCATCCATTATTACTACTCTCCATACCATTCATTTTGGAATATTT
ATGTAACACGATTGATATAGATTTTAAAACAAGAGTAATGATAAATTTAA
CACATTAAAGACACAGTTAAACTACTGTTTCTCATCT Coding sequence (CDS) from alignment at sc0000069:507879..509365 >TCONS_00006713 ID=TCONS_00006713|Name=TCONS_00006713|organism=Clytia hemisphaerica|type=CDS|length=540bp|location=Sequence derived from alignment at sc0000069:507879..509365 (Clytia hemisphaerica)
TCATCCCTCTTTCTTGCACGACATAACAGGATTCGAAATCACCATGTCTG
CAGTCGACGGATTTGTCGCAATCAAGACGTCATATAACGTTGCAATTCGA
AACAAAGCTTTGACGTCATGGTCATGAGGGGCCGCTGACGTCGGGTCCCA
AAAGAAGCATAAGAAATCACAACGGTGCTCGGCGATTCGAGCGCCAATTT
GTTGGTCCCCACCATCAGGTCCACTTAACATCCCTTGGACGTCCAAACCA
GTctctttgttgattttctttgaagTTGTTCCAGTGCCGATAAGATaata
ttctttcaaaatgtGTTTCCATTTTTGACACCATTTGATCAAGTTTGGTT
TATATTTATCATGGGCAATCAAGGCAATCGTTTTGCGATGAGCCATTTTG
ATCGATTTTTGTCTCGTTGGAACATTAAGTGACACagcattttcaaaatc
tttatatTCGCCATTTTGAGTGAAATCGTGATCACTGGTGCCGATGATGT
TATCTAGGCATCCATTATTACTACTCTCCATACCATTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006713-exon-sc0000069-1491911889:507879..509365 | TCONS_00006713-exon-sc0000069-1491911889:507879..509365 | Clytia hemisphaerica | exon |
| TCONS_00006713-exon-sc0000069-1510915933:507879..509365 | TCONS_00006713-exon-sc0000069-1510915933:507879..509365 | Clytia hemisphaerica | exon |
| TCONS_00006713-exon-sc0000069-1575043694:507879..509365 | TCONS_00006713-exon-sc0000069-1575043694:507879..509365 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000069 | supercontig | sc0000069:507879..509365 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008929 | methylglyoxal synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019242 | methylglyoxal biosynthetic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0019242 |
methylglyoxal biosynthetic process |
| molecular_function |
GO:0008929 |
methylglyoxal synthase activity |
Blast
The following BLAST results are available for this feature:
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