TCONS_00066423 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066423
Unique NameTCONS_00066423
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2420

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066423 ID=TCONS_00066423|Name=TCONS_00066423|organism=Clytia hemisphaerica|type=transcript|length=2420bp
ctttgttaaatttttacTCAGTGAGCGGAAAACATAACGTCATAGCAATC
AGAGGAATTTTGCTAATATTCTTCtatattttaaaaagtttaacataatt
ttgagttttttttgacaaaactcTTTGTAATTATATAGCTTTTGAGTAAT
CTaatcgattttttttaattttacaatttgttttacCATTATAcagattt
tatttcatttatttactgaTCAAAAGCTATATTCTCCTACGCATCGAAGT
TCACCATGTACGGAGCACGGTCCGAATGGTGGTGAATTGAGTGAAAATGA
TTACGCATACCAATGTTTTTCCAAACCTTTACAAACTGCTGAATTAAAAA
GTCTTTGTCTGGGTCAGCCTCTGGAGGCTGAGTGGATCTGGCAAAATGGT
GATGGGCTCACCCAACGCTGAAGGCTCTGTACAAACAGTTTCCACACTGG
CGCTTGCGGAAGCTGCTCATCGAGAATACCAAGCTGGTAACTATGAAAGT
GCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTACTGG
ATGCCTCTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGGACC
AATCTGCACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTTGCA
GAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGTTAA
AGATGCACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATTTCA
TTGACGGCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGATTTA
GAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGAACT
ATATTGTGTACGAAGTGATCTTGGAAATCTACTGAAAGCACTTGGTCGAC
TTGAAGAAGCTAAGGCATGTTATCTCAAAGCCATTGAAACTCAACCAAAC
TTTGCTGTGGCTTGGAGCAACCTTGGATGTGTATTTAATGCTCAAGGGGA
AATATGGCTTGCCATTCACCATTTTGAGAAAgcTGTTCAAATTGACCAAA
ACTTTCTTGATGCCTACATAAATCTTGGCAATGTGCTCAAAGAAGCCAGA
ATATTTGACAGAGCTGTGACTGCCTACTTGCGTGCACTAACAATAAACCC
AAATCATGCTATTGTCCATGGAAATTTAGCATGTGTTTACTATGAGCAAG
GGCTCATTGATTTGGCAGTTGATACTTACAAAAGAGCTATTGAACTACAA
CCAAACTTCCCTGATGCTTACTGTAATTTGGCAAATGCTCTTAAGGAACA
AGGCAAAGTTGAAGAATCAGAGGAATGTTATAACACAGCTCTAACCCTAT
GTCCATCACATGCAGACTCGTTAAATAATCTAGCAAACATCAAAAGGGAA
CAAGGCAAAATTGAAGATTCCATTGGATTGTACATGAAAGCGCTACAGGT
CTTTCCAGAGTTTGCTGCAGCCCACTCTAATTTAGCAAGTATTTTACAAC
AACAAGGAAAACTCCACGAAGCATTGATGCATTACAAAGATGCAATAAGA
ATCCATCCGACTTTTGCTGATGCATACTCAAACATGGGGAATGCCTTGAA
GGAAATGCAGGATATTCAAGGTGCAATCCAGTGCTACACCAGAGCCATTC
AAATAAATCCTGGTTTTGCAGATGCCCATAGTAATCTTGCATCAGTATAC
AAAGACTCAGGAAATATTGCTGAGGCTATTCAATCCTATAGAACTGCTCT
TAAATTGAAACCAGAGTTTCCAGATGCTTATTGTAACCTTGCACATTGCT
TACAAATAATTTGTGATTGGAATGATTATGATAATCGTATGAAAAAACTG
TTAACAATAGTTGATGATCAACTTGGTAAAAATCGATTGCCTTCAGTTCA
TCCGCACCACACCATGTTATATCCTTTGTCCCCACAACAAAGAAAGGCTA
TTGCTAATCGTCATGGAAACCTTTGTCTTGATAAGGTATGTAATGACTGG
TTTTCAATAACTTGAATTACAGTATGATATCTTTAGTCAcataactttgt
attgaaaACCCAGCTTCAGTTAAGGTtaagccaattttcattcattgatt
GAGTCCTCTCCTGAAGCTTCCAATTTGTGAAggaaattttatgaattttt
tggacctccatttctttttttttatctcaCAATTGATCACCTGGGAATCA
ATTTGAAAGAATGGCTGGCAAACTTGCTTTATATAATTCACATAACCTTT
TACATAATGAGCATTTTATTTTAGACAAAAATTAGGGGTTGTTttagaaa
atcatgaaaaaactaaatttgggtAGGAACTTATTTTGATGAGACGGCAA
TATTTTTAAGTCCACTAAAgtgtagactagtaaactagtcggttattact
tataataaaactgtcaatca
Run BLAST on NCBI

transcript from alignment at scaffold_455:338263..347055+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066423 ID=TCONS_00066423|Name=TCONS_00066423|organism=Clytia hemisphaerica|type=transcript|length=8793bp|location=Sequence derived from alignment at scaffold_455:338263..347055+ (Clytia hemisphaerica)
ctttgttaaatttttacTCAGTGAGCGGAAAACATAACGTCATAGCAATC AGAGGAATTTTGCTAATATTCTTCtatattttaaaaagtttaacataatt ttgagttttttttgacaaaactcTTTGTAATTATATAGCTTTTGAGTAAT CTaatcgattttttttaattttacaatttgttttacCATTATAcagattt tatttcatttatttactgaTCAAAAGCTATATTCTCCTACGCATCGAAGT TCACCATGTACGGAGCACGGTCCGAATGGTGGTGAATTGAGTGAAAATGA TTACGCATACCAATGTTTTTCCAAACCTTTACAAACTGCTGAATTAAAAA GTCTTTGTCTGGGTCAGCCTCTGGAGGCTGAGTGGATCTGGCAAAATGGT GATGGGCTCACCCAACGCTGAAGGCTCTGGTAAGTTAGTATTTGAGACTG GGATTGCGATTGATGGACTGACGTTATTCCCGAGGGAAGAGTGTGCGACT TGGCACTTCCACTTTCGTTTTGAACAAAAGGAGGGGAAAAAACTTGCGAC ATGAAAGGGAAGTGGTACGATCACCAGCGGGAATGACTTTTAGATGGTTC TTATCCTATGCCTACtctaaaaaatttttgtttacactGTTTCAGACCTC CCTTAGAAtattattgtttcaaaaagGAAATGAGTTGACTCTGGAGCTTA TTATAAGCTTATTTTTgtgttgtgattttttttgaaatatttgctatAAT TTGCTTTGCGAAGTCCTGAGCCATTTTTTGGGGGCAAATGGGTACTGTTT AGTATGTCTCAGCATCAGAGCAGTACAGGGAACCTTTTCAAACCCTGAAA ATGTCTTTAAGAGTTGTGAAACCAGCCTTCAGCAGCCTGTAGAAGGTTCT CAAAATCTGATCAAACAAACTTGTCGAATCCAATCAAACAATtgaactaa tcaaactccatcgaacgattaaagttcaattaaaaaaattaatcaaacct aatcaaacactcacaatttttgaagcaatagcagttcgattggttcggtc aggaaaaaaacttcgattagttcgatgatattaaatcctcatatcttccc ttgcttgcaaaaactttatcctgccacgcgattgccatttcgacagttcc cggacttaacaaCTTAAagtttattgtacccggatatttgtccgCGGCCC CTTTGTTGCGATTTTGCACGCAGCCGAGTGGTGGATTCCTACGCCtcaac aaaccgcctctggcgctaaaaggatacagggaAAGTGCGTAATCCATAAT CGGtttaatttcccgatttacattctgaatttggctttgaaaagaagcta atatacggtggtggagcagcacaaacttgtcgaacaattaattggtttat cgaactgattgaaccgaaacccattgataGAACTTATTAAACACTCAGGA TCTTTTAAtaaatcttagagttcgattaattatTTTAATCAATCTTTAAT CGTTTgatgaagttcgattagttcaattgttcgattggttcgacaagttt gattgatcgggtctggtataTTCcttgaagtcaggtaacttgcatcagtg gagggaaacatACAtacccctcaaatgaatgacctgtctggtcattaaaa tacaaagttaaatacaaacaaaaatggtagagtagagctgcgagcggagc tgcatggttcatttgttttgaaatttttctgctttgtttggtcagtcatt tgagggctaatagaccttttttcaaagaggacgtcttGTTGAAtgattat gtagtccagccgtaaaaacaatgatagagccatgcataattactgtatca tgcatattgtaataattatgcatggttttatcattgtttttctgctggac tacataattattcaacagggtggcctctttgaaaaaggtctattgaagtt tccctccactgatgatgcaagttacccaacttcacggtatAGAAATGTAG GGCTCCctaattttaaaatatattttttgggaGATCGTAAAATACAGTAG TTGCTTCCTCAAGATttctaagccaatcaaaatatgTGCACAGAAAACTG TGCTAGCAGTGGCGTTGTGACaagcggagcttttttgaaaggGCGCCAAA AGAGACTTTTTTAATTGCCCTATCCTTAAATATCATACTTTAGGCGCCTT AAATCGCGCCCCTGGatcaattttactgagatagttttaaaatacttgca atttttttttgctcacttcGCTTGCAATACAGCTAATTGGTAACTTCATG CAATCTTTAGctaaatttacaagtttttttgtgtacaatatagcattaNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNagccaaagaaatttttagaatcataatttccaa aacttcagaaaataacagaagaatgaagaagagaattacaaacaaaattg gtgattttatttttgtttgatcTCTTATAAGTAACACAACTTATAATAAC AAcaacattcgaaaacaatagaatgtcttcatttctctCAAGATTAAAGA TAGGGGATAATGCGCGAAATTTTTTACCCCccccttcataatttttttac caagcatagggttaagcatatatagtcgaggctcaaaattgagctttact taagcatagtgagcttcagccgaaatttaccgtatgcttataaaacgaaA TGAGTGTATTGAATGAAAAGttaactgcgccccaagaccaatttgctgac aagGGGGCTTGGAAGCTTTGGCAATTTGCAAGAgtgttttccattcattt ttggatttctcaacaattattatattttatagTTAGAGATTGTAAGAGTT TGTGCTTAAAAGGACGAAAAGAGAGGGGGTtgaggaattttcatttttaa gagggGTTGATCTAAAAAAGGGGGTACGCtatcaaaaaatcagaaagata aGATCTAGCATACAAATTTTTGTTGCTAGTTTTTTCACTGATTACCTTTT TCCTCAAATCAATGTAGTTTTCTTCAACAAACTTCACATGCAGTGTTGCT GAACAATGTCTCACAACCCTTCATTTTTTAGTACAAACAGTTTCCACACT GGCGCTTGCGGAAGCTGCTCATCGAGAATACCAAGCTGGTAACTATGAAA GTGCTGAGAAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTACT GGATGCCTCTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGGA CCAATCTGCACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTTG CAGAAGCTTTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGTT AAAGATGCACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATTT CATTGACGGCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGATT TAGAGGGAGCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGTA AGTCAAATTTGTACAGATTTCAGCATTCACTGATTGGGGACTTGCTAAAT CATTTTCAGGCTCTTATGTTTGTATGTCATACACTAATCTGTGTAAGGCT CATTTTCTATATAGAGCCAATTTAttttatgcttatagaaaagtgaataa aattttatatacTTTTCAGGAACTATATTGTGTACGAAGTGATCTTGGAA ATCTACTGAAAGCACTTGGTCGACTTGAAGAAGCTAAGGTATGTAATGAG AATTCTTTTATACCTCTTTACTTTATGAACAGTTTTTCGCTTCCCTAAAG AGAAACATCTGAATCTAATTGCCTCTTTCTTTATTTTCNTAAGAGGGGGT TGATCTAAAAAAGGGGGTACGCtgtcaaaaaatcagaaagataaGATCTA GCATACAAATTTTTGTTGCTAGTTTTTCACTGATTACCTTTTTCCTCAAA TCAATGTAGTTTTCTTCAACAAACTTCACATGCAGTGTTGCGGAACAATG TCTCACAACCCTTCATTTTTTAGTACAAACAGTTTCCACACTGGCGCTTG CGGAAGCTGCACATCGAGAATACCAAGCTGGTAACTATGAAAGTGCTGAG AAACTTTGTATGCAGTGGTGGAGAAGGGAGACTGATAGTACTGGATGCCT CTTACTTCTATCATCCATTCATTTTCAATGCAGAAGGCTGGACCAATCTG CACAATTCAGTCAACTTGCCATAAAACAGAACCCGATGCTTGCAGAAGCT TTCTCCAATCTTGGGAATGTGTTGAAAGAAAAAGGCCAAGTTAAAGATGC ACTCGCAAATTACAGACATGCAGTCAAACTCAAACCAGATTTCATTGACG GCTACATTAATCTTGCTGCTGCACTTGTTACTGCTGGTGATTTAGAGGGA GCTGTGCAAGCTTATGCCACTGCCCTTAATTATAATCCTGTAAGTCAAAT TTGTACAGATTTCAGCATTCACTGATTGGGGACTTGCTAAATCATTTTCA GGCTCTTATGTTTGTATGTCATACACTAATCTGTGTAAGGCTCATTTTCT ATATAGAGCCAATTTAttttatgcttatagaaaagtgaataaaattttat atacTTTTCAGGAACTATATTGTGTACGAAGTGATCTTGGAAATCTACTG AAAGCACTTGGTCGACTTGAAGAAGCTAAGGTATGTAATGAGAATTCTTT ATACCTCTTTACTTTATGAACCGTTTTTCGCTTCCCTAAAGAGAAACATC TGAATCTAATTGcctctttctttattttctatGGTTCCAAACAGGGTATC AACTGTGAATCAACTACATGGAATCCTCAATGATGCTGTTTATCCTGACC AGTCACACATATTTTATCTTAGCACTAGAGGATTGTGAAAGCTATTACTA GAAAAACTCTTTCTCACTAGACCTAGAACATCTAATGACTAAATCTTAAG TTAATAGCCTTTTCAATCTTCTGATAATAACTTGTGATTGTTACATTGGC CATGATTATTTTTCTTCAATGAAGGCATGTTATCTCAAAGCCATTGAAAC TCAACCAAACTTTGCTGTGGCTTGGAGCAACCTTGGATGTGTATTTAATG CTCAAGGGGAAATATGGCTTGCCATTCACCATTTTGAGAAAGTAAGTTTT GTCTATCAGAGGGAGTTGGTACTCAAATCTCAGACATAGTGGTGTTGCAA AAGGTGGAATGCAAAATACaaagatttgagattttttttttgaaaaaact tttgtaCTCATTGACTATTTGACAAATTCAATTTGTGCCAAAAAGGGTTT TTGCATTGCATCGGtgtcaaaatgttttgaaagaatTGGTATAATTCATG TGTACTAAAATGCCACTTTCTAAatctttgggggggggggtggtatgtaa aatattctcaaaatcCCCTTTCAGCAACACTTATCTAGGTCTGACTCTTC CTGTCTATAAATTAATCGTATTCCCTGTCTTTTTCTATCATTGAAGCTTT TGACATTAACAGATTCTGTGAATTAAAGCTCCCATTTCTCTTGTTTGCCA ATTCATATTGCATTAGGAAGTGAcatacattttatttttataagcaagtg tatgccccttggtcaggctcaaGTATgattaagttctcaaagcatccagg catagtttatgcttattatatgctgatgaatcatgcttatgattcacctt gagccaagtttttagtgaaattacAGAAATGtcgtaaaaatttgttcata tTTTGGGAGCAGtcgaatgtagctagccgtggaatttcttttttttttac ttgacctctctaccaaacctttttaaacagataagaAATggcaacttgaa aaatatttcaggctgacacaTATGCTTATGCTATGCTTAGGAATTcagca aatctgagccttcatatgcttataagcgttctgcttataaaaaaaaaaca tgtagtgtcCTGTCCtcatgattgaaaaattcaGTCTGCTTTTCTAAGca tctttgtttacattaacccattttcgttctattttgtctagtattccttt tgcaacaaaattttacgtttgtgtcaggttgacatttgagaaatttttat gGGTATATTGGaggaactgatattttcagaattttttggggggaaatCAA AAAAGGGGGCAAACAAAAAAACTGTCATAGGAGAAaaaagaatttggtgg ggggaacaaaccctggagtgAGTGGGTAAAACCCATGTTGTTCACAAAGA ACCTCATTAAGGCTGACTTTATCAAGATCTGTATCAGATAACTAATTTTA CCCCATTTTCAGTTCACATTtacttttctttgaaataacTTCAGCCACTT TTGAAACGCCTCaagaaaacagaaaatgaaaagttttgaaaattattttt caggcTGTTCAAATTGACCAAAACTTTCTTGATGCCTACATAAATCTTGG CAATGTGCTCAAAGAAGCCAGAATATTTGACAGAGCTGTGACTGCCTACT TGCGTGCACTAACAATAAACCCAAATCATGCTATTGTCCATGGAAATTTA GCATGTGTTTACTATGAGCAAGGGTAAGAAAtcttttccaatattttttc atttcttaatCCACACATTGCTTGGATTAGTTTCCCTGTAATAATGTGAC ACCTACTTCCAGGTTGGCCACCCTTTGCTTTGTCCAAAGTAATTTTATTG CAGCTGTTCATAGCTCTTTATGATTTGAAGGATGGATCAACTATAAAGTG AATTGTTTTAGTTCTGTTTATTATGACAGCATACCTATCACATGCAGCTA CATTTAATCTTTGAGCATCAACACTGTCACTTTGAAGACTTATTGCTGAC AGAAATCTCACAAATTTAGTGAGCAAAATTGTCTTATTCATTTTCAGGCT CATTGATTTGGCAGTTGATACTTACAAAAGAGCTATTGAACTACAACCAA ACTTCCCTGATGCTTACTGTAATTTGGCAAATGCTCTTAAGGAACAAGGC AAAGTTGAAGAATCAGAGGAATGTTATAACACAGCTCTAACCCTATGTCC ATCACATGCAGACTCGTTAAATAATCTAGCAAACATCAAAAGGGAACAAG GCAAAATTGAAGATTCCATTGGATTGTACATGAAAGCGCTACAGGTGAGC CTAATAAACTATGTAATaagattgaaaattgatttcagatttttttacat attaGACAGAAAGGGTAATTGAGTTGAGGGTGTGGTTAACAATACCCAAT TTATATTTGTCACAGGTCTTTCCAGAGTTTGCTGCAGCCCACTCTAATTT AGCAAGTATTTTACAACAACAAGGAAAACTCCACGAAGCATTGATGCATT ACAAAGATGCAATAAGGTATTTAAAATGATTGTGTAATGCACCTTATTCA TTTTCCATAAATACTGTCCTCTTGCAGGTATTACCCGATTTTGCAGTGGG ATACTCCAATTTAGCTTGTGTCTTACAAGAGCAAGGACGCCTCAAGGAAG CTTTACTGTATTATCAAGAGGCAGTGAGGTATTGTAATGGCATTTTTTAA TAAGCTGAAAGTTTTTCTCTTACATGTCCAATATAACCTTTTATTACAAG TTTATTTTTTGTAAGATTTAATTTGCTTGTTTTGTTTCTACTAAAATGAC ACCTTTTAAAATGCTAATGTAATGTGTTTCTTCTCATTTGAAATAAACTT TTTTTCAACAATTTTATTTCAGAATCCATCCGACTTTTGCTGATGCATAC TCAAACATGGGGAATGCCTTGAAGGAAATGCAGGATATTCAAGGTGCAAT CCAGTGCTACACCAGAGCCATTCAAATAAATCCTGGTTTTGCAGATGCCC ATAGTAATCTTGCATCAGTATACAAAGACTCAGGAAATATTGCTGAGGCT ATTCAATCCTATAGAACTGCTCTTAAATTGAAACCAGAGTTTCCAGATGC TTATTGTAACCTTGCACATTGCTTACAAATAATTTGTGATTGGAATGATT ATGATAATCGTATGAAAAAACTGTTAACAATAGTTGATGATCAACTTGGT AAAAATCGATTGCCTTCAGTTCATCCGCACCACACCATGTTATATCCTTT GTCCCCACAACAAAGAAAGGCTATTGCTAATCGTCATGGAAACCTTTGTC TTGATAAGGTATGTAATGACTGGTTTTCAATAACTTGAATTACAGTATGA TATCTTTAGTCAcataactttgtattgaaaACCCAGCTTCAGTTAAGGTt aagccaattttcattcattgattGAGTCCTCTCCTGAAGCTTCCAATTTG TGAAggaaattttatgaattttttggacctccatttctttttttttatct caCAATTGATCACCTGGGAATCAATTTGAAAGAATGGCTGGCAAACTTGC TTTATATAATTCACATAACCTTTTACATAATGAGCATTTTATTTTAGACA AAAATTAGGGGTTGTTttagaaaatcatgaaaaaactaaatttgggtAGG AACTTATTTTGATGAGACGGCAATATTTTTAAGTCCACTAAAgtgtagac tagtaaactagtcggttattacttataataaaactgtcaatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041563XLOC_041563Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066423-exon-scaffold_455-1491911889:338263..338691TCONS_00066423-exon-scaffold_455-1491911889:338263..338691Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1510915933:338263..338691TCONS_00066423-exon-scaffold_455-1510915933:338263..338691Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1575043694:338263..338691TCONS_00066423-exon-scaffold_455-1575043694:338263..338691Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1491911889:341544..341582TCONS_00066423-exon-scaffold_455-1491911889:341544..341582Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1510915933:341544..341582TCONS_00066423-exon-scaffold_455-1510915933:341544..341582Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1575043694:341544..341582TCONS_00066423-exon-scaffold_455-1575043694:341544..341582Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1491911889:342525..342901TCONS_00066423-exon-scaffold_455-1491911889:342525..342901Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1510915933:342525..342901TCONS_00066423-exon-scaffold_455-1510915933:342525..342901Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1575043694:342525..342901TCONS_00066423-exon-scaffold_455-1575043694:342525..342901Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1491911889:343074..343142TCONS_00066423-exon-scaffold_455-1491911889:343074..343142Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1510915933:343074..343142TCONS_00066423-exon-scaffold_455-1510915933:343074..343142Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1575043694:343074..343142TCONS_00066423-exon-scaffold_455-1575043694:343074..343142Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1491911889:343487..343603TCONS_00066423-exon-scaffold_455-1491911889:343487..343603Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1510915933:343487..343603TCONS_00066423-exon-scaffold_455-1510915933:343487..343603Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1575043694:343487..343603TCONS_00066423-exon-scaffold_455-1575043694:343487..343603Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1491911889:344866..345035TCONS_00066423-exon-scaffold_455-1491911889:344866..345035Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1510915933:344866..345035TCONS_00066423-exon-scaffold_455-1510915933:344866..345035Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1575043694:344866..345035TCONS_00066423-exon-scaffold_455-1575043694:344866..345035Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1491911889:345360..345606TCONS_00066423-exon-scaffold_455-1491911889:345360..345606Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1510915933:345360..345606TCONS_00066423-exon-scaffold_455-1510915933:345360..345606Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1575043694:345360..345606TCONS_00066423-exon-scaffold_455-1575043694:345360..345606Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1491911889:345728..345828TCONS_00066423-exon-scaffold_455-1491911889:345728..345828Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1510915933:345728..345828TCONS_00066423-exon-scaffold_455-1510915933:345728..345828Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1575043694:345728..345828TCONS_00066423-exon-scaffold_455-1575043694:345728..345828Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1491911889:346185..347055TCONS_00066423-exon-scaffold_455-1491911889:346185..347055Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1510915933:346185..347055TCONS_00066423-exon-scaffold_455-1510915933:346185..347055Clytia hemisphaericaexon
TCONS_00066423-exon-scaffold_455-1575043694:346185..347055TCONS_00066423-exon-scaffold_455-1575043694:346185..347055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:338263..347055 +
Expression
No biomaterial libraries express this feature.
Blast
BLAST of TCONS_00066423 vs. Swiss-Prot (Human)
Match: OGT1 (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3)

HSP 1 Score: 919.842 bits (2376), Expect = 0.000e+0
Identity = 431/525 (82.10%), Postives = 483/525 (92.00%), Query Frame = 3
Query:  414 NAEGSVQTVSTLALAEAAHREYQAGNYESAEKLCMQWWRRETDSTGCLLLLSSIHFQCRRLDQSAQFSQLAIKQNPMLAEAFSNLGNVLKEKGQVKDALANYRHAVKLKPDFIDGYINLAAALVTAGDLEGAVQAYATALNYNPELYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQIDQNFLDAYINLGNVLKEARIFDRAVTAYLRALTINPNHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPDAYCNLANALKEQGKVEESEECYNTALTLCPSHADSLNNLANIKREQGKIEDSIGLYMKALQVFPEFAAAHSNLASILQQQGKLHEALMHYKDAIRIHPTFADAYSNMGNALKEMQDIQGAIQCYTRAIQINPGFADAHSNLASVYKDSGNIAEAIQSYRTALKLKPEFPDAYCNLAHCLQIICDWNDYDNRMKKLLTIVDDQLGKNRLPSVHPHHTMLYPLSPQQRKAIANRHGNLCLDKV 1988
            + E + + +S   LAE AHREYQAG++E+AE+ CMQ WR+E D+TG LLLLSSIHFQCRRLD+SA FS LAIKQNP+LAEA+SNLGNV KE+GQ+++A+ +YRHA++LKPDFIDGYINLAAALV AGD+EGAVQAY +AL YNP+LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAV +D NFLDAYINLGNVLKEARIFDRAV AYLRAL+++PNHA+VHGNLACVYYEQGLIDLA+DTY+RAIELQP+FPDAYCNLANALKE+G V E+E+CYNTAL LCP+HADSLNNLANIKREQG IE+++ LY KAL+VFPEFAAAHSNLAS+LQQQGKL EALMHYK+AIRI PTFADAYSNMGN LKEMQD+QGA+QCYTRAIQINP FADAHSNLAS++KDSGNI EAI SYRTALKLKP+FPDAYCNLAHCLQI+CDW DYD RMKKL++IV DQL KNRLPSVHPHH+MLYPLS   RKAIA RHGNLCLDK+
Sbjct:   11 STEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKI 535          
The following BLAST results are available for this feature:
BLAST of TCONS_00066423 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OGT10.000e+082.10UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
back to top