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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066279 ID=TCONS_00066279|Name=TCONS_00066279|organism=Clytia hemisphaerica|type=transcript|length=1130bp
AAAAAACAACGCACAACCACGGATAAAGTGACTAAAAAAAGTCAcattaa
aaaattgtttcagataaaaaaaaaattcatcctaAATTTATCATAAGCAG
TTTGAAATAATATAATACAAGGAGAactaattttagtgaaaaaatatttg
actaTATACACGAAAAACAACCAAGCACCAATCAATCGTAGCTATATAct
aagaataaaaaatcattaaaattttgtttaaattaaCTAGCCATTCGGTT
TTGAGTTACTCGAACGAAATTTCAGTAAAAGGACGGCCTATACAGTCCCA
AAAACCTTGAAATGGGCGTGCGTAATATTTTACCTTAAAGATGCTAATAT
TCGCAGTGAAAAAACATTCTGAAAAGCCGCATTCGACGGGGAAAATATTA
CAGAGCAGCCAGCggcgaaatatttcaaaacttctgttctttttttccag
gagagagaaTTTTGGAGTCAGGAGCCAGTTATTTTCcaagcatttaaaaa
aaaaatccacaAAGGAGCATTAAATTAGAAAAAGTTGCATTTATTTTTCC
AGCACTCCTCAGATTTCCCTGGTCAAAAGACTCCAGGACCAAATTTGAAC
AAAGAGCCGACGCTCAATTAAATACCATAAGAACAGAGGAGTTTTTACAA
TAACCATGATTTGaactagcctagttaactaagcctgtattcacaaggct
aggacacacgacttatggcaatatagcgttttcggcgctttaaagatttt
ttatatttacggattttaagtttgccttggaatactgttattcagtcaca
acttaaccatcagatttaagtgactgaatcaaactagcttagatttctag
gctagatTTAAATTTAGAGCAAATGGAAATTTCCAGGCACCTAAATCTTT
TTAAGAACAGATAATTTTATCCAAGAGTCTGGCAAGAAAAGaacatatat
ttttccagggAAAGTTACCATTCAGAACAGATCATTTGTAATTTCTAACC
GTTGGCTGCTCTTGTATTGTCGGCTATAAGACTATGTCGGCTTTTATAAC
TTCGGTCATTTTTTCGTCCCTTTAATTCACCGGGTTAAATGTTCATTGTT
CATTTacgaaaaattctttcttttacGGTA Run BLAST on NCBI transcript from alignment at scaffold_451:519936..521065 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066279 ID=TCONS_00066279|Name=TCONS_00066279|organism=Clytia hemisphaerica|type=transcript|length=1130bp|location=Sequence derived from alignment at scaffold_451:519936..521065 (Clytia hemisphaerica)
TACCgtaaaagaaagaatttttcgtAAATGAACAATGAACATTTAACCCG
GTGAATTAAAGGGACGAAAAAATGACCGAAGTTATAAAAGCCGACATAGT
CTTATAGCCGACAATACAAGAGCAGCCAACGGTTAGAAATTACAAATGAT
CTGTTCTGAATGGTAACTTTccctggaaaaatatatgttCTTTTCTTGCC
AGACTCTTGGATAAAATTATCTGTTCTTAAAAAGATTTAGGTGCCTGGAA
ATTTCCATTTGCTCTAAATTTAAatctagcctagaaatctaagctagttt
gattcagtcacttaaatctgatggttaagttgtgactgaataacagtatt
ccaaggcaaacttaaaatccgtaaatataaaaaatctttaaagcgccgaa
aacgctatattgccataagtcgtgtgtcctagccttgtgaatacaggctt
agttaactaggctagttCAAATCATGGTTATTGTAAAAACTCCTCTGTTC
TTATGGTATTTAATTGAGCGTCGGCTCTTTGTTCAAATTTGGTCCTGGAG
TCTTTTGACCAGGGAAATCTGAGGAGTGCTGGAAAAATAAATGCAACTTT
TTCTAATTTAATGCTCCTTtgtggattttttttttaaatgcttgGAAAAT
AACTGGCTCCTGACTCCAAAAttctctctcctggaaaaaaagaacagaag
ttttgaaatatttcgccGCTGGCTGCTCTGTAATATTTTCCCCGTCGAAT
GCGGCTTTTCAGAATGTTTTTTCACTGCGAATATTAGCATCTTTAAGGTA
AAATATTACGCACGCCCATTTCAAGGTTTTTGGGACTGTATAGGCCGTCC
TTTTACTGAAATTTCGTTCGAGTAACTCAAAACCGAATGGCTAGttaatt
taaacaaaattttaatgattttttattcttagTATATAGCTACGATTGAT
TGGTGCTTGGTTGTTTTTCGTGTATAtagtcaaatattttttcactaaaa
ttagtTCTCCTTGTATTATATTATTTCAAACTGCTTATGATAAATTtagg
atgaattttttttttatctgaaacaattttttaatgTGACTTTTTTTAGT
CACTTTATCCGTGGTTGTGCGTTGTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066279-exon-scaffold_451-1491911889:519936..521065 | TCONS_00066279-exon-scaffold_451-1491911889:519936..521065 | Clytia hemisphaerica | exon |
| TCONS_00066279-exon-scaffold_451-1510915933:519936..521065 | TCONS_00066279-exon-scaffold_451-1510915933:519936..521065 | Clytia hemisphaerica | exon |
| TCONS_00066279-exon-scaffold_451-1575043694:519936..521065 | TCONS_00066279-exon-scaffold_451-1575043694:519936..521065 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_451 | supercontig | scaffold_451:519936..521065 . |
Blast
The following BLAST results are available for this feature:
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