TCONS_00065376 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065376
Unique NameTCONS_00065376
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2106

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065376 ID=TCONS_00065376|Name=TCONS_00065376|organism=Clytia hemisphaerica|type=transcript|length=2106bp
CTATAAACTAAACGTTGATGCACCTGTTACTGGACAGCGAGAATGAAATC
ATATGAATAAAACCTGACAATCAGTGAATTCAACAATGAATTGGAAAACA
AAATGACCGGAGCTTTTAGAAGGCATTTAGGGAATcagagaaaaagaaga
acaaattgaaaatgaatcaTCACGGCAGCATAGATGCTATGCACGATCAA
GCCGAAGAACAATCCACGTCATCAACGAAGGAGAGCAAAAagaaatccaa
agaaaacctaaGCAAGGATACAGAGGACTCCACCTTAGATGATAACAACG
AAAACAACAATCTAATCAATGAAAAANCAATCCACGTCATCAACGAagga
aagcaaaaagaaatccaaagaaaacctaaACAAGGATACAGAGGACTCCA
CCTTAGAcgataaaaacgaaaacaacAATCTAATCAATAATAAGGataaa
aagaaatccaaaaaagatAAATCCAATACGTCAAACAGACAACCGgtttc
tttcaaaacaaaatattttccatgGATTGTTTGCGCTACAAGCTTTGTGG
TCCAGTTTTTCGTGCTGGGCTTTTATAAAGCTTTTGGTCCGGTCTATGTG
AAATTGTTACAAGAAGAACCAGAGGGGTATGGAGGTAGCCCCGTCGCTAC
TTcATGGGTAGCTTCACTTTCCATCAGTACATCCTACCTGAGCACACCTT
TATCCTTTGAAATCATCCGACGAATCAAGTTTCGACCCGCTATGTTGATC
GGTGCTACGTTATCAGGTCTTGGTTTGCTTGTCTCCTCATTCGCTGATAG
TGTTTACATTCTCTACGTCACGTTCGGATTGTTGTTCGGATTCGGTTCCA
GTCTGTGTTACAGTTGCTCTCTCTTGATTCTGCCTCGTTATCATACAACA
TACTGGGCGTTGGCTCATGGCATCGCACTAGCCGGGAACGGTTTAGGAGG
CATGGGACTTTCACCGGCTAATGGTATGCTTTTGGATTCTGTAGGCATCA
AGAAAGGCTTCAGGATCATGGCTGCAGTGTCGTTTGGTGTTTTGTTTACA
TGTGGTTTAGTCTACGAGACACCTCCAGAGAAGGATCCcgctgaagaaga
aaatgaagaggaCGATGAAGAAGATCTAGAAAGTCTTaatgaagaagatg
aagaaaaattattagaaGAAGAAGTCTTCTATCATGACACAATATGGAAG
AATAAACCGCTTCTCATATTTCTTCTCTCCACATACTGCTTAAATTTTGG
ATACTACGTACCTTATGTCCACTTGGTAAAGTTATCACTGGACGAGGGTG
TATCGAAATCACAAGCAGACTTGTTACCAGGCTTACTTTCTCTAGCTCAG
TCAGTTGGTAAAGTGTTCATCGGCAAAGTATTCTCCTACCCTAGCGTCAA
CCGTATACGAGCATATCAACTCAGCTTGGTCGCTTTATGCATCGCAACAA
CTTTCGTCCCAGTCTTATCAAAGTCATACCCAGGCTTGTTAGTCTACGCA
ATAGCTTTTGGATTTTCTGACGGTTGCGGCCAGGCGACGAATATGATTAT
TATAGGAGATTTAGCTGGTAAAGAATTACTACCGAAAGCTTACAGCACCT
TTTTGGTATGCTCCGCTTCTGCTTTCGTGGTTGGTCCACCAATTGCAGGC
GCTGTTTACACGGCGACTGGTGATTACTCAATCGCTTTCTTCATGTGTGG
AGCTATGGCGTTCGGCTCGGCTGTCCTCCTCTTTCCAGTGACGTGTATAC
GGGACGAAGAACAATTCAAATATCGAGCTAAACGAAGAAAAGAACGAGCA
GAAGCTAAAAAATTAAGAGAAGAACGAAAGAAAATGGGCTTACCAGAAGA
AGAAGCTCCATCTACACCAAAGGACCATCTGTCGGCTGACAAGATGAAAA
AGATACGACAATCACAAGTCTCCCTACTCACACGTAGCTGGCATAGCATT
GATTTCAAACAACACAAATCTAAGAGTAAAGAAAGTATACGTAGTCGTGC
TAGTAGGAGAAATGTCGATTTGAATGAGGTCAAAGTTGATGCTTGATGCC
TTATCAGACATGCGTGAACTATCtgacttttttatcaaactGTAACCGAC
CGAATA
Run BLAST on NCBI

transcript from alignment at scaffold_439:617871..629245+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065376 ID=TCONS_00065376|Name=TCONS_00065376|organism=Clytia hemisphaerica|type=transcript|length=11375bp|location=Sequence derived from alignment at scaffold_439:617871..629245+ (Clytia hemisphaerica)
CTATAAACTAAACGTTGATGCACCTGTTACTGGACAGCGAGAATGAAATC
ATATGAATAAAACCTGACAATCAGTGAATTCAACAATGAATTGGAAAACA
AAATGACCGGAGCTTTTAGAAGGCATTTAGGTATGAAAACCATTCTTTTA
TGTTcactttttagaaaatatacATATACTTGAATACCGCTCAACCCCTT
TTTCCTGCAATAACCCCATCCTCAGGGTTTGAATAATCGGGAGTATTGTG
TCGGTGTTTTACATAATTCATACACGCAGATACACGACGTTTACGAAGTA
CGAAGCCTGTGATATCAAAATCTCTGCATTTGCCATTGAGGAATAGTTTA
AAAAGGTCTCGTAAAAGTTAAGTTTCAGGCCTATGATTATTTGATCCTCA
TTTTCCCATAATAGCCTTATTTTTAACACACATTTTTTTACAAATgtggg
ttgcttagcattctagctcattttgcATTGATaaccctgatattatacca
tatttatgcgtattgggtcaagggctatcgtttgccatTGTTGGATTACc
gaaaaagcttttactttacgaaaTAATGTAGTGAAAAAATGGCTAATGGT
TGCTTATCAAAAATAAGCAGTATAATCTGAggtcacatctcgaaacaact
ttcgatctCTTATGCTTTGAGGGCATGTTGTGTAAATAAGTAGTTGACTC
GTTATGGAGGCATTTTCCTTTCTGTCGCTTCCTTTTACCCCTAAACAATA
TTTTTAAGGATGATAACTTTATGCAGGAGTGGTCACCGGATAACAACTGA
GCTGTTCTGTGATGATACTTCACTTCAGTATTCAACCATCACAGTCTCAC
TGTTAATCTCCTCACATCAACAAATTCTACTGTGTTTCTTTTTGTGTTCA
TTATTTACCATTCTTGAAATGATGAATATAATGACATGAGTTACATGAGT
TACAGGAGCTACCAAATTTTCTTGAGTAATATCTTgctttcttaaaaatt
aatgttCTTGTGTTAGGGGCATATTATTATTTCTTTACACTTgttttttg
gagttttggaGCTTAATTTGATAAGAAATATTTCATATTGGGGCCCCCAT
ATTCGGTGGCCTGTGCTGACTTGCgagtagacgatgttatcgtccgttac
agtgatagcagaggcgggaaaaaatggcggtatggcgttttggcggtata
cggaaaaaaatcggcaaCTCTTCCGACtgttaactcttttcggcaaaaaa
acccgtttgcgaattttcttcggctttgggcttttttcttagatagtgat
tcgtcttagactataacatagtctaacTTGCGAGCTTCTAATAAAGCGGC
GGTGAAAATAAGGAGTAAATATAATAGTTATACTCCCAAATTACGACTGT
TCAGAGTGTGCAATTCTCATGCTTTCGCACAATAAGTCTACATGGTTTCC
TCTATTTCTTACGCTATTATAAAGATAGTCAAGCTCTCTAGTACGCCCAT
GGAGTGATGGTTTAGCCATAATGGGAATTTCAAAGCCTAACACAACAACA
ATATTTACAGGGAAATCTCAAGCCAATTTGATTATATGTATTGAGAAAAG
ATAGAAGAATGCTATATTCATCATATCATCggcatcaaaacaaaattata
ttgatttttataagaatttattgatttttataagaatattttccaTGCAC
ATTTATAGTTCGATCTATACGTCGTTTCACAGAACAAGAATCTCAAATCT
CGGATTGCTATTTATATCAAAACTCACAAGGTCTACCCTACGTACATTTT
AAATGCAATATCTTTGCCATTTTGGTACCCATTAGTATGAATATTTGACG
GCTCAAGCTTGTGTAGAATATAACGCGTGTTCCTTATAATCTCTACTCTC
ATCGGTATCATAGCATAGTATTATAATCTCATCGATTGTAATGGATGACC
CTGTTTTTTAATAATACCATTcttgtatttattttctttttatataatat
agGAATCACCCGCTCGGTTGGACTCATACAATGTATGAACAGACAAATGA
CCGATTATTAACATTTTCAATGATTAAAATGCAATAAATGAGACTCTTGA
TTATGGCTTAAGGCCCCATCTACACAATATGAATGTATGTACTCGTTATA
TTATAGATTTTTCTTATGATTACTCTGTAACGTATTAAGCTAATGCCAAC
AAATGCAGACACTACGAATTTAACGACGAGTGTTGACTGTATATACCTGT
ACATAAAGCCTGGCATCAGCGGTCCAACGGGAGTGTTCTTACTATAGGGA
CCTCTAGGCTATTGTATGAGATACAAAAAGCAATAATAAACCCAACCGCT
GTCAACAACAAGTATCATATCATCTCATCTTGGCGTGCGTGCATGGGAAT
GGGAAGCATCAACTACTCTTCTCTGTTCCATTATTGTTAATAGTTTAATa
taatagaataaaaacataatgTAAACATACCCTTAACAATTTTCTATAAT
GGACCCAAGCTTCTATTAACTCAAACCCCCAATGATAATTGACGCTCCTC
CTTCCTGCAAATATTGTCATCAAGTATTGCAAACATCGCCTTATTTTGAT
CACCCTGTAGGAGTGCTTGTTACTGTAATTGGGAGCATCAGTAAGTCAAT
TACACTATGCAAGACAAAGGCCAACCACCACTAATAGTAAGActgtatta
ttatttttcatgtttgCTCTGATACAAAGTCTTCGAACTACATGTTATTT
TGATCCGAAGATTTTTGAGAGCTAAATAGCGTCTATTTAAATTACAAGAT
TAGCTTTTATTTGCTTGTTGGTTTGAACACATGGGTGTATTGCTTCCAGG
ATGTATTTTGTTGCTACAGGCCGGCGAAACTAAATTTAAATCTGGGCGAT
CGCTTAGCACAATGAGTCTAACGATTCTTAACATAGGCTGTTCTCCAATT
AAGTTAACACCCCGGGGTATATTAAGGATCATTGTCAAACTTTAATGGTT
TATTTGGTGTAGAGTAGCTGTTTTTGTTTCAGAAACTGCTATACCAATTT
TATCACCATACTTTTAGACAGTTTTTCAGATACCATATCTATAAATGATT
GGTAGATTGAAAACCAGTTACAAAACCATTCTAAAGACCACCTTTGTGTG
TTGGTAGAAAGTCTTCAAACTTCAACTtattttttggaacattttaTCTT
GTTAATTTGACATGAATGCTACAACTAAACTTAAAACCCCTTCAAAATCA
CGTCAAAGTATGTAGCCTGCTTTCACTAAATCCTTAGTATTCCATGCACG
CCTTGATCTAAACTAAAATATTTGATAAGTTATGTTCTGCTGTTGTTAAG
ATAGCCCTCTTGTaggggacgagatggagtttttacaagctcttatttga
tttggttggtcgttaaccagtaataaaacaattttgttactttttctaaa
gaacgcgtcatttttattacttcaaatgaccaataattaaagtatcttat
aaaaactccatcccaTCTGTCTTGTAGAGTGAGTGTTTTGCTTTGACCTT
GAAGAAGACtttaaagaaatcttttttccaTTATTTTGCTTCTAAAAGTA
TTCCTTCAGTTTGAAGGCCTCGAAAATGTTTCGTTCACTTTCCCCTTGAA
CTCTTAATGTTATTTGATTAAAAATCATTATTAAAGGGGCGCCGGGGCAC
TTTCTACCATCTTAGACAAAATGTGTATTTAATTATCGAACATATAACGC
TTATAAGTGGAACAACAAAAAGTATGTCAATTCTCATGTAATTGTACCAT
CTAATTATATCCTTACCATGATTAAAGTGATTAATGCTCCTGTGGTTTTT
GTACTCTAATTATTGAGGAATATTTTTGTCCTCGGAACAGATTGAGattc
ctttcttttttaaagaggtCAGTaggcttttcaaattttctggGTGAAAT
AGTCTTGGTGAACTTAAAAGTCTTCCAAATATTAGAAAATGAGCTTGAGA
GCTTGGAGCCCTTTTAATTGTTTAAATTGATTGTTAAACAAAATATATTT
AGTACTTAGAATCATTTAAAAATAACATTTATATTGCTTAAACCTTAGGt
ttcttacacgttttttaataagaacatcccaaacttttgaagccttcgga
tgttcttaacatattcttattttcactattttgtgagtatttttgcccat
cttcctaagaaatcagatgtttttgagtccatgaagccttaaaatgttct
aaacttgttcttaacaatttaaccattgaagctttatgttcttatatact
ttgttcttatacaaaaaaacgTGAATCAGATTCTCTCAAGAGGTTTCTTT
CTTGGAGGTCTAATCAATGTTTATCTCATCGCTTCAAAGGGTTTAGTTTT
ACATAAAATGTTCCCGCTTCATATTTGGTGATGAATAATAAtttccctct
ttctgaccaatcttgctccacacccgtgtcaattcaatgtgaaaaagctt
ataaattaagattgatgagtaagcagACGATATCAAGTGTATGATCGAGT
TCTTCAATTCAGGTTTCAATTCGTTAcaaatgttgttttttgttgttgtt
gttgaaaaatTAAGATTGATAGTTGATAGCAagaacctttttatttttat
cttcaaCGGGCCAGCACTTTGTAAGATTCTCTGATCAAATTAAAAGTAGA
TAACCACTGGCATTGCGAAAATATGATTTGATTAATCTAAAAATGAGATA
TGCTCAAAGAACGGTTAATGATGATCGTTTTGAAATTCTGTGAACCAGAT
ACTGGCTGCTTGACAACAAACTGATTGTAACAGAGCTGATTTCTTTTTAG
ACTGTTTTCTGATAGCATTATATAACATATTGAATTTCCTTTCACGTTTC
TTCACAGGGAATcagagaaaaagaagaacaaattgaaaatgaatcaTCAC
GGCAGCATAGATGCTATGCACGATCAAGCCGAAGAACAATCCACGTCATC
AACGAAGGAGAGCAAAAagaaatccaaagaaaacctaaGCAAGGATACAG
AGGACTCCACCTTAGATGATAACAACGAAAACAACAATCTAATCAATGAA
AAANCAATCCACGTCATCAACGAaggaaagcaaaaagaaatccaaagaaa
acctaaACAAGGATACAGAGGACTCCACCTTAGAcgataaaaacgaaaac
aacAATCTAATCAATAATAAGGataaaaagaaatccaaaaaagatAAATC
CAATACGTCAAACAGACAACCGgtttctttcaaaacaaaatattttccat
gGATTGTTTGCGCTACAAGCTTTGTGGTCCAGTTTTTCGTGCTGGGCTTT
TATAAAGCTTTTGGTCCGGTCTATGTGAAATTGTTACAAGAAGAACCAGA
GGGGTATGGAGGTAGCCCCGTCGCTACTTGTAAGTATTTACTTTGCTTGC
CACCATAATCTCCCAGTATCCTTGTCTCGAGAAGCTTTTAACCAATAGGA
ATGCGATTTATAAGGAGCTTTACAGTTGACGTTAGAAATAAAAGATTTAG
GCCAGCAAAATTCCCTTTTCTCCATGTGCACAATCCTAGATTaaagtaga
gtctctttaacttgaaTGTCCTCTTAACTCGAACACGTTTTCTCGTCCCT
TTAGTTAACaaagccttataaaccttactccataactcgaaatttcacta
actcgaacaaattggTGTTCTCCGTGTGAGTTCGGGTTATGGAGACTCCA
ATGTATTgaattcattgaaatttttccttttttatagcATGGGTAGCTTC
ACTTTCCATCAGTACATCCTACCTGAGCACACCTTTATCCTTTGAAATCA
TCCGACGAATCAAGTTTCGACCCGCTATGTTGATCGGTGCTACGTTATCA
GGTATTCATTCAGTAATTATCCTTTAAAACTGCCTTCTCAAATTTGATTA
GATTTATCACTTTTTTCACTTCAAGCGCTTAACATGTGTCAAACATCTTA
CgaattgtttaatttttttaatcgaagaAATTCCTATATTTCAACGATTT
TGAATTATCTATCTCGTGAATATCGAAGCTCACGGTTTCATTGAGTTTTG
TAGGATGTTAAACCCAAAATTTAATCCAAAGTAGTAGTGTGTAGTCTAAT
GACTGATTTGAAAAATCCAGTTCGGACTAACTTAATAAGCAAAATTTTTA
ATCCATACGAACTAGTATGAAATTAGCATGAACAACAACAAAACTTACTG
TACAGGTCTTAGCAGGCCTACTACATTGAGCAAGGAATGTGTTCGTGTTA
GCATCCAACACGCTTAATTTCTCATAAAAGATATAATGCTACTTGTAATA
GAAGATacgtcaaatattttctttgtgtGATTCTCTGCACGATAGATGAG
ACTGCTCGATACTTTTTAAGTAGAGCGTGTTACATTAATGAGAAACAGAT
TATTTCTTTATCAATATTTAAAGTTCCAATATTTGATATTTAATGCAACT
CATACTACTGTTGTTATTTCCAGGTCTTGGTTTGCTTGTCTCCTCATTCG
CTGATAGTGTTTACATTCTCTACGTCACGTTCGGATTGTTGTTCGGATTC
GGTTCCAGTCTGTGTTACAGTTGCTCTCTCTTGATTCTGCCTCGTTATCA
TACAACATACTGGGCGTTGGCTCATGGCATCGCACTAGCCGGGAACGGTT
TAGGAGGCATGGGACTTTCACCGGCTAATGGTATGCTTTTGGATTCTGTA
GGCATCAAGAAAGGCTTCAGGGTATGTATGTGTTATATGAAACGAGTTAA
CCAATGCGAGTCTCGTACAAACTAGAAAGAAAGCTCGAGGAAGAAATAGT
CCTAATggtttaaatcatttttgacCTTTCTTGGTTCGACgacaaaaatt
aattatttgttTAAAGTTCAAATCTTGAGTTCTAAAGATGGTcatgaaaa
taaatatcttATAATTTTCTACTCCCTTCTTCAGATCATGGCTGCAGTGT
CGTTTGGTGTTTTGTTTACATGTGGTTTAGTCTACGAGACACCTCCAGAG
AAGGATCCcgctgaagaagaaaatgaagaggaCGATGAAGAAGATCTAGA
AAGTCTTaatgaagaagatgaagaaaaattattagaaGAAGAAGTCTTCT
ATCATGACACAATATGGAAGAATAAACCGCTTCTCATATTTCTTCTCTCC
ACATACTGCTTAAATTTTGGATACTACGTACCTTATGTCCACTTGGTGAG
TATAGTTGGTTTATAATCCCCTTGTGACTGGTGCATTTATTATTACCATC
AGTAAAGAGATCCTTCTATTTGGTATAAACTTGGATCATTGCAACAAGGT
ATTATAGAAAACTACTTTGATTTTTAGTAAGGAATGGCGTGGCAAGTGTG
GTAAGTATGGCTAGCCAGATAATCTTCTCCGTCTGGTCTGGAACCTTTCT
ATGCTTCTTCTCTAAACACTTCTGATGGTCACAGGAAATTTTGTGCTGTT
GCTGTGTTCTGGAGGACTAAAATTGTTATAAAATGTTTAATGAGTTATAT
TTTGATTTCCAGGTAAAGTTATCACTGGACGAGGGTGTATCGAAATCACA
AGCAGACTTGTTACCAGGCTTACTTTCTCTAGCTCAGTCAGTTGGTAAAG
TGTTCATCGGCAAAGTATTCTCCTACCCTAGCGTCAACCGTATACGAGCA
TATCAACTCAGCTTGGTCGCTTTATGCATCGCAACAACTTTCGTCCCAGT
CTTATCAAAGTCATACCCAGGCTTGTTAGTCTACGCAATAGCTTTTGGAT
TTTCTGACGGTTGCGGCCAGGCGACGAATATGATTATTATAGGAGATTTA
GCTGGTAAAGAATTACTACCGAAAGCTTACAGCACCTTTTTGGTATGCTC
CGCTTCTGCTTTCGTGGTTGGTCCACCAATTGCAGGTTCGTTTCCTTTTT
CTTGATATCCTTTAATCTTTAATCTCAAAAGACGACAGTAAGTCAACAGG
CTTTCTTCCTCCCTTTGAACGTTAATCTCTTTGTTCCAGGGGAAATGTCA
TTTGATCGATCAACAGTTTCCCTCCCGTCATTTTATAGCAGTTGGACACC
CTCCTATCACAAAGTAGGCTACGTCATagcttccttcgtttcgagcgtaa
aactcctactctaaGGTTTAAAAGCCTGGAgttgtctattgtgtagacta
atcACAGAGCCGGTAGGACCTTCATTAGAAAACTTTGCTAAAAATATTGT
CTTAGGTGAGAAAAACCTTGTAATTTCACCGCCCCGTTTCCTAATTCGTT
TAGACGACAGGATTGTCTTCAACTGGTTTAGACCCACACGCTGATTATTT
GTATGTCATTACTTAACTAATGTTTTTACTTCTTGGTTATTTGAAGGCGC
TGTTTACACGGCGACTGGTGATTACTCAATCGCTTTCTTCATGTGTGGAG
CTATGGCGTTCGGCTCGGCTGTCCTCCTCTTTCCAGTGACGTGTATACGG
GACGAAGAACAATTCAAATATCGAGCTAAACGAAGAAAAGAACGAGCAga
agctaaaaaaataagagaaGAACGAAAGAAAATGGGTATGATACNGAGTT
ATATTTTGATTTCCAGGTAAAGTTATCACTGGACGAGGGTGTATCGAAAT
CACAAGCAGACTTGTTACCAGGCTTACTTTCTCTAGCTCAGTCAGTTGGT
AAAGTGTTCATCGGCAAAGTATTCTCCTACCCTAGCGTCAACCGTATACG
AGCATATCAACTCAGCTTGGTCGCTTTATGCATCGCAACAACTTTCGTCC
CAGTCTTATCAAAGTCATACCCAGGCTTGTTAGTCTACGCAATAGCTTTT
GGATTTTCTGACGGTTGCGGCCAGGCGACGAATATGATTATTATAGGAGA
TTTAGCTGGTAAAGAATTACTACCGAAAGCTTACAGCACCTTTTTGGTAT
GCTCCGCTTCTGCTTTCGTGGTTGGTCCACCAATTGCAGGTTCGTTTCCT
TTTTCTTGATATCCTTTAATCTTTAATCTCAAAAGACGACAGTAAGTCAA
CAGGCTTTCTTCCTCCCTTTGAACGTTAATCTCTTTGTTCCAGGGGAAAT
GTCATTTGATCGATCAACAGTTTCCCTCCCGTCATTTTATAGCAATTGGA
CACCCTCCTATCACAAAGTAGGCTACGTCATagcttccttcgtttcgagc
gtaaaactcctactctaaGGTTTAAAAGCCTGGAgttgtctattgtgtag
actaatgACAGAGCCGGTAGGACCTTCATTAGAAAACTTTGCTAAAAATA
TTGTCTTAGGTGAGAAAAACCTTGTAATTTCACCGCCCCGTTTCCTAATT
CGTTAAGACGACAGGATTGTCTTCAACTGGTTTAGACCCACACGCTGATT
ATTTGTATGTCATTACTTAACTAATGTTTTTACTTCTTGGTTATTTGAAG
GCGCTGTTTACACGGCGACTGGTGATTACTCAATCGCTTTCTTCATGTGT
GGAGCTATGGCGTTCGGCTCGGCTGTCCTCCTCTTTCCAGTGACGTGTAT
ACGGGACGAAGAACAATTCAAATATCGAGCTAAACGAAGAAAAGAACGAG
CAGAAGCTAAAAAATTAAGAGAAGAACGAAAGAAAATGGGTATGATATAt
ttgttcatttgttttttgatttagTGTTTGGGATTCTCTTTTTACTCTAC
TAAATTAGCCTGGGTATCAAGACAATACACTCATCATTGTTTAAAATTGT
GTCTGTGTCAGGTGGATTTCCGTCTAAACCTGACCGGGAatgagattttt
gtttattcatcaaattagaaaaaaataaggaCGGGTTTCCGTCTGAAAAG
ATGGGTTTCCCTACTCCTCTTCTAGCCTGAATATCCAGACTAAAAGCTTT
TAGGAAAAAACTACCTTAACATGAAAAAAGTTCAAAGATGTTATACATCA
GGCACTGGTGCTTTCATTGTGCAGTTTAAGCAGTTTGAGGATTGACTCAA
CTTTTAAAATANTTTGGTATGCTCCGCTTCTGCTTTCGTGGTTGGTCCAC
CAATTGCAGGTTCGTTTCCTTTTTCTTGATATCCTTTAATCTTTAATCTC
AAAAGACGACAGTAAGTCAACAGGCTTTCTTCCTCCCTTTGAACGTTAAT
CTCTTTGTTCCAGGGGAAATGTCATTTGATCGATCAACAGTTTCCCTCCC
GTCATTTTATAGCAATTGGACACCCTCCTATCACAAAGTAGGCTACGTCA
TagcttccttcgtttcgagcgtaaaactcctactctaaGGTTTAAAAGCC
TGGAgttgtctattgtgtagactaatgACAGAGCCGGTAGGACCTTCATT
AGAAAACTTTGCTAAAAATATTGTCTTAGGTGAGAAAAACCTTGTAATTT
CACCGCCCCGTTTCCTAATTCGTTAAGACGACAGGATTGTCTTCAACTGG
TTTAGACCCACACGCTGATTATTTGTATGTCATTACTTAACTAATGTTTT
TACTTCTTGGTTATTTGAAGGCGCTGTTTACACGGCGACTGGTGATTACT
CAATCGCTTTCTTCATGTGTGGAGCTATGGCGTTCGGCTCGGCTGTCCTC
CTCTTTCCAGTGACGTGTATACGGGACGAAGAACAATTCAAATATCGAGC
TAAACGAAGAAAAGAACGAGCAGAAGCTAAAAAATTAAGAGAAGAACGAA
AGAAAATGGGTATGATATAtttgttcatttgttttttgatttagTGTTTG
GGATTCTCTTCTTACTCTACTAAATTAGCCTGGGTATCAAGACAATACAC
TCATCATTGTTTAAAATTGTGTCTGTGCCAGGTGGATTTCCGTCTAAACC
TGACCGGGAatgagatttttgtttattcatcaaattagaaaaaaataagg
aCGTTTTTCTGTCTGAAAAGATGGGTTTCCCTGCTCCTCTTCTAGCCTGA
ATATCCAGACtaaaagcttttagaaaaaaactacCTTAACATGAAAAGTT
CAAAGATGTTATACATCAAGCACTGGTGCTTTCATTGTGCAGTTTAACCA
GTTTGAGGATTGACTCAACTTTTAAAGTGTATTTTGAATTTACTTCCCTA
ATCCAGGCTTACCAGAAGAAGAAGCTCCATCTACACCAAAGGACCATCTG
TCGGCTGACAAGATGAAAAAGATACGACAATCACAAGTCTCCCTACTCAC
ACGTAGCTGGCATAGCATTGATTTCAAACAACACAAATCTAAGAGTAAAG
AAAGTATACGTAGTCGTGCTAGTAGGAGAAATGTCGATTTGAATGAGGTC
AAAGTTGATGCTTGATGCCTTATCAGACATGCGTGAACTATCtgactttt
ttatcaaactGTAACCGACCGAATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040986XLOC_040986Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065376-exon-scaffold_439-1491911889:617871..618000TCONS_00065376-exon-scaffold_439-1491911889:617871..618000Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1510915933:617871..618000TCONS_00065376-exon-scaffold_439-1510915933:617871..618000Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1575043694:617871..618000TCONS_00065376-exon-scaffold_439-1575043694:617871..618000Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1491911889:622778..623299TCONS_00065376-exon-scaffold_439-1491911889:622778..623299Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1510915933:622778..623299TCONS_00065376-exon-scaffold_439-1510915933:622778..623299Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1575043694:622778..623299TCONS_00065376-exon-scaffold_439-1575043694:622778..623299Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1491911889:623658..623771TCONS_00065376-exon-scaffold_439-1491911889:623658..623771Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1510915933:623658..623771TCONS_00065376-exon-scaffold_439-1510915933:623658..623771Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1575043694:623658..623771TCONS_00065376-exon-scaffold_439-1575043694:623658..623771Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1491911889:624394..624641TCONS_00065376-exon-scaffold_439-1491911889:624394..624641Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1510915933:624394..624641TCONS_00065376-exon-scaffold_439-1510915933:624394..624641Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1575043694:624394..624641TCONS_00065376-exon-scaffold_439-1575043694:624394..624641Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1491911889:624855..625115TCONS_00065376-exon-scaffold_439-1491911889:624855..625115Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1510915933:624855..625115TCONS_00065376-exon-scaffold_439-1510915933:624855..625115Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1575043694:624855..625115TCONS_00065376-exon-scaffold_439-1575043694:624855..625115Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1491911889:625433..625805TCONS_00065376-exon-scaffold_439-1491911889:625433..625805Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1510915933:625433..625805TCONS_00065376-exon-scaffold_439-1510915933:625433..625805Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1575043694:625433..625805TCONS_00065376-exon-scaffold_439-1575043694:625433..625805Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1491911889:627321..627509TCONS_00065376-exon-scaffold_439-1491911889:627321..627509Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1510915933:627321..627509TCONS_00065376-exon-scaffold_439-1510915933:627321..627509Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1575043694:627321..627509TCONS_00065376-exon-scaffold_439-1575043694:627321..627509Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1491911889:628977..629245TCONS_00065376-exon-scaffold_439-1491911889:628977..629245Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1510915933:628977..629245TCONS_00065376-exon-scaffold_439-1510915933:628977..629245Clytia hemisphaericaexon
TCONS_00065376-exon-scaffold_439-1575043694:628977..629245TCONS_00065376-exon-scaffold_439-1575043694:628977..629245Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:617871..629245 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.09069e-05	0	0	0.75442	13.7915	14.8835	18.5122	16.0468	7.01554	8.48084	5.26907	3.57532	2.44885	3.88727	0	0.289061	2.44695	3.53197	1.19854	3.63563	2.52817	1.96473	0.383763	0.66419	1.84661	2.08677	0.229334	0	0	3.37069e-05
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065376 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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