TCONS_00064612 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064612
Unique NameTCONS_00064612
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length249

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064612 ID=TCONS_00064612|Name=TCONS_00064612|organism=Clytia hemisphaerica|type=transcript|length=249bp
ttttcattggtCAATTATTTTAGTCCCAATGACAGGTTTGTCGGTGACCA
GTACCATCCCACAACTGCACCGCAGgctattttgctcttttttatgtgCT
TACTCCAAGATACTATAACATGTTGCCAGGTATACTTTAATGgtccattt
catttgtattgCTTCTATTACATCTTAAAGGAGAATTAGCAGCaacaaat
aaatataaatatgacaaaaaaagtatcaccgacttgaaaaagttgaaat
Run BLAST on NCBI

transcript from alignment at scaffold_419:329790..330038

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064612 ID=TCONS_00064612|Name=TCONS_00064612|organism=Clytia hemisphaerica|type=transcript|length=249bp|location=Sequence derived from alignment at scaffold_419:329790..330038 (Clytia hemisphaerica)
atttcaactttttcaagtcggtgatactttttttgtcatatttatattta
tttgttGCTGCTAATTCTCCTTTAAGATGTAATAGAAGcaatacaaatga
aatggacCATTAAAGTATACCTGGCAACATGTTATAGTATCTTGGAGTAA
GcacataaaaaagagcaaaatagcCTGCGGTGCAGTTGTGGGATGGTACT
GGTCACCGACAAACCTGTCATTGGGACTAAAATAATTGaccaatgaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040521XLOC_040521Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064612-exon-scaffold_419-1491911889:329790..330038TCONS_00064612-exon-scaffold_419-1491911889:329790..330038Clytia hemisphaericaexon
TCONS_00064612-exon-scaffold_419-1510915933:329790..330038TCONS_00064612-exon-scaffold_419-1510915933:329790..330038Clytia hemisphaericaexon
TCONS_00064612-exon-scaffold_419-1575043694:329790..330038TCONS_00064612-exon-scaffold_419-1575043694:329790..330038Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:329790..330038 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.778846	0	0.88185	0.862752	2.10064	2.48993	3.68281	4.68716	9.73297	9.75548	5.05062	13.954	4.89258	4.06099	3.61978	1.42382	5.84677	3.59565	12.419	6.06459	6.7773	7.71336	1.78602	0.811876	4.6493	5.2241	4.27181	6.83849	2.59338	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064612 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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