TCONS_00064387 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064387
Unique NameTCONS_00064387
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length231

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064387 ID=TCONS_00064387|Name=TCONS_00064387|organism=Clytia hemisphaerica|type=transcript|length=231bp
GCAAAGTCAACAATCATAGATTTCAAGAGGGGATACATCCCCTGGATGCT
AACCCAAAGTTGGAATGAGGGTGTTGTTAACATATCTTTATGTTTATTAT
AAGACTTTCCAGACATTTTGGTTTGCAGGCTTATGCTAAATTCCAGACAT
TTCCAGCAAACGTAATAACCTTGATTGTATAGTCAGTTCTTATAATTGCT
CTAAAAGCTTTGATAACAATACAAACAATAA
Run BLAST on NCBI

transcript from alignment at scaffold_412:60603..60833

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064387 ID=TCONS_00064387|Name=TCONS_00064387|organism=Clytia hemisphaerica|type=transcript|length=231bp|location=Sequence derived from alignment at scaffold_412:60603..60833 (Clytia hemisphaerica)
TTATTGTTTGTATTGTTATCAAAGCTTTTAGAGCAATTATAAGAACTGAC
TATACAATCAAGGTTATTACGTTTGCTGGAAATGTCTGGAATTTAGCATA
AGCCTGCAAACCAAAATGTCTGGAAAGTCTTATAATAAACATAAAGATAT
GTTAACAACACCCTCATTCCAACTTTGGGTTAGCATCCAGGGGATGTATC
CCCTCTTGAAATCTATGATTGTTGACTTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040371XLOC_040371Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064387-exon-scaffold_412-1491911889:60603..60833TCONS_00064387-exon-scaffold_412-1491911889:60603..60833Clytia hemisphaericaexon
TCONS_00064387-exon-scaffold_412-1510915933:60603..60833TCONS_00064387-exon-scaffold_412-1510915933:60603..60833Clytia hemisphaericaexon
TCONS_00064387-exon-scaffold_412-1575043694:60603..60833TCONS_00064387-exon-scaffold_412-1575043694:60603..60833Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_412supercontigscaffold_412:60603..60833 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064387 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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