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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063740 ID=TCONS_00063740|Name=TCONS_00063740|organism=Clytia hemisphaerica|type=transcript|length=1356bp
CCAGCCTTTTTCGAATCGTAATTATAtgaatttgataaatttcaaatcCT
TACGGTCTTCCACTGTTGTAATTGCTTTCATAGTTTCAAACCCTCGATCT
taaccaaaagttttttttacaaaagaaagaattcaacaaaaaatatgaaa
aacttgaatcaaaaaactttatacataaaaattttgtaaatagtttcaaa
taaagaacaaaaacatATAATTAATGCGTTTAAAAATAAATTGAGtaaaa
aaccacaaaaattaTCGTGGTGGTGACTTTTTCATTCATGGTAATGTCGA
AACTAGATTTCCCTAAAAAAGACCTAAAAGAATTGGAAATTTAGCTCATC
TTGACTACTATGAATGAAATCGTCTAAACgttcttttttattataagaac
agttTTATAAGAGCACGAGACCTCGTCTAAAATTTGATCCTTGGGAGAAA
CGTTCTATTATGTACAACAATAAATTTAAGAACAGAAATTTGATGAGGTC
TTTTAACAGTTAACCGGAAATTATCTTTAATAAtcaattaattcttttta
agTTTGTCCATAATAAGTTTTTATTCTTTcttaatgggcttttccagaaa
tagtcggtgcccccccccctgttgaggatatcggatatccagggggttaa
cgactTTTGTTCAAAAGCGGATATccgggggttaaatatctacaagggag
cggatacccagggggtaaagtgtcttttcaagtaaaaaatacgatatcca
gggggttcgatagtttgaaaaatcaatatgctcaacagtgggggtaaaaa
ttttttctggaaaagcccaatacaaTGTGAAAACCACCCTCAAGGCAGTT
ACACGTGACATGGTTTCcacatgaaatttaaaaagagtgaacacttatcg
tgaataaaCATTGAGCTCATAAGTGGTCAGTACCACATTTTTGCTACTGA
CTCCAGTATACTAGCATATACATTTTCTATAGCATATTTCAAGAAAGTTt
agtaaattcattttttacgatCAATACCCATTAGGATTTAGTCTGCAGAC
TTTGATAAATCGTCACCATAATTTATAAGATTATCTCATTTTTTCCCCAA
TGTTAGAACTTCTACCATAAATTCACATACCTCAGCAAAAGTTTAAATTA
ATAAATTTGGTCGGAAACGGGCTTTTAGATCAGGGGTCAACATCTCCTtc
aatggaaaatattttctcagATGACATCCAGATTCAATGACAGAACATTT
CCTCAATGAACTCAATGCATATAGATTAAGAGATATCGACTTTTGCTTGG
AATCTTCCATGGCATATTAACGGTGCCATTGATGGTTCGATCCCGATTAC
ATAANN Run BLAST on NCBI transcript from alignment at scaffold_4:8828..10183 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063740 ID=TCONS_00063740|Name=TCONS_00063740|organism=Clytia hemisphaerica|type=transcript|length=1356bp|location=Sequence derived from alignment at scaffold_4:8828..10183 (Clytia hemisphaerica)
NNTTATGTAATCGGGATCGAACCATCAATGGCACCGTTAATATGCCATGG
AAGATTCCAAGCAAAAGTCGATATCTCTTAATCTATATGCATTGAGTTCA
TTGAGGAAATGTTCTGTCATTGAATCTGGATGTCATctgagaaaatattt
tccattgaAGGAGATGTTGACCCCTGATCTAAAAGCCCGTTTCCGACCAA
ATTTATTAATTTAAACTTTTGCTGAGGTATGTGAATTTATGGTAGAAGTT
CTAACATTGGGGAAAAAATGAGATAATCTTATAAATTATGGTGACGATTT
ATCAAAGTCTGCAGACTAAATCCTAATGGGTATTGatcgtaaaaaatgaa
tttactaAACTTTCTTGAAATATGCTATAGAAAATGTATATGCTAGTATA
CTGGAGTCAGTAGCAAAAATGTGGTACTGACCACTTATGAGCTCAATGtt
tattcacgataagtgttcactctttttaaatttcatgtgGAAACCATGTC
ACGTGTAACTGCCTTGAGGGTGGTTTTCACAttgtattgggcttttccag
aaaaaatttttacccccactgttgagcatattgatttttcaaactatcga
accccctggatatcgtattttttacttgaaaagacactttaccccctggg
tatccgctcccttgtagatatttaacccccggATATCCGCTTTTGAACAA
Aagtcgttaaccccctggatatccgatatcctcaacaggggggggggcac
cgactatttctggaaaagcccattaagAAAGAATAAAAACTTATTATGGA
CAAActtaaaaagaattaattgaTTATTAAAGATAATTTCCGGTTAACTG
TTAAAAGACCTCATCAAATTTCTGTTCTTAAATTTATTGTTGTACATAAT
AGAACGTTTCTCCCAAGGATCAAATTTTAGACGAGGTCTCGTGCTCTTAT
AAaactgttcttataataaaaaagaacGTTTAGACGATTTCATTCATAGT
AGTCAAGATGAGCTAAATTTCCAATTCTTTTAGGTCTTTTTTAGGGAAAT
CTAGTTTCGACATTACCATGAATGAAAAAGTCACCACCACGAtaattttt
gtggttttttaCTCAATTTATTTTTAAACGCATTAATTATatgtttttgt
tctttatttgaaactatttacaaaatttttatgtataaagttttttgatt
caagtttttcatattttttgttgaattctttcttttgtaaaaaaaacttt
tggttaAGATCGAGGGTTTGAAACTATGAAAGCAATTACAACAGTGGAAG
ACCGTAAGgatttgaaatttatcaaattcaTATAATTACGATTCGAAAAA
GGCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063740-exon-scaffold_4-1491911889:8828..10183 | TCONS_00063740-exon-scaffold_4-1491911889:8828..10183 | Clytia hemisphaerica | exon |
| TCONS_00063740-exon-scaffold_4-1510915933:8828..10183 | TCONS_00063740-exon-scaffold_4-1510915933:8828..10183 | Clytia hemisphaerica | exon |
| TCONS_00063740-exon-scaffold_4-1575043694:8828..10183 | TCONS_00063740-exon-scaffold_4-1575043694:8828..10183 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:8828..10183 . |
Blast
The following BLAST results are available for this feature:
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