TCONS_00062952 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062952
Unique NameTCONS_00062952
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2193

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062952 ID=TCONS_00062952|Name=TCONS_00062952|organism=Clytia hemisphaerica|type=transcript|length=2193bp
GCTGTAACGAGGTCTTTGCCACTGAGCCCAGTGTCATCTTCAAGGATTTG
TCGCAGGGTGATGTTCGGTCTACCAACACGTCGATCTTCTTCGGGGGTCC
AGGCTTTACCTACAATCCTTCATCAAGAATTATGCTTACGGGCATGCGCA
GGACAAAGACGTATACATCAGAACAATGATATCACGTTTGTATTTTGAGA
TCAAAACAACAGCGTTAGAAACATCAGTCAGAAAGTTCCATACGCTCCTA
CATCCAATCTCTGAAGATCAACAATTCTTTCATGAAGCTGTCTATTTATC
CTCGAATACAACAACCAATGAATTTTTCTCATATGTAGAATATTACGACC
CAGTATTTTATCCAGGCTACTATTCCATGATGAATAGATTCTACCGTAAA
GTGACAGAACCGATGGAATCAGCATTTGTCAACGGTCTTCGGTATTCGAT
CCAGACCGATGTCACCTTTTGCGGCCGAGATGTGGAATGTGATGCCAGTA
AACCGACAATTTTACAACAATTGAGAAGCGCCTCGCTTATTCCTTCATTC
ATGCAATCCAATATCCCGCTAGGAAAATTCCGAATCAAATTCCTTCAAGG
TGGTAAATGTATGAACTCCTATCAATCAGGCTCTAACATGGTTGTCATTG
GAGACGCCAAATGTCGAGATGTCTGGGCATTCGGTATGCACCTGTACCCA
GAACATCCTTTTTCCTTATGGAACATCGAGCTTGGGTTACGAATCACTGG
CGATATATCAAAACAGTTGCAAATCTCAGACTCTGCTAATTCACCAAATA
AACACCATTATGCATTGGGAGTCAACAAGAACACACTAGTCCTACCGACT
TCACCTTACAATAGAGGTGCACGATGCGTTCTTTACAATTCAAACAATAA
CAAAGTGGAATTAAGCAACACTGAGTTGATTGGTAATGCAGGCCATTGTA
CAGCCAAGAAAAATGGACATGTCAAATTTTTACCAGattattCTGCACAC
TACGACCGATTGAATATGAAAAGTTTGATGACAACAACTATCACTTCAGG
AGAAGACATCCTCCTTGTTTGTGATCCTAAAAGAGACTTgAAAGTCAAAT
CGAATTGTCATTATTCTAAAGACAAGCAATTCACGTGGACAGGTCTTCCA
TCACTTGTCACCCAAATCACTTTCTACATCCCATCTGATGACCTATTTTA
CGGTTATTGTAACGAAGTCAAATACCATTGTTCCTGGAGTCTACAATCCA
ACAAGGTTTTGGCGATGGATGATGCAAGTTACAATGGCAAAttagctgat
gtcagcaaagTTGTAGCAAGTAATCTTGACGCTCAAAGTCTGTGGCTCCC
CAACAATGTCCAAATATTTAGCCAAGACGGCGACATTGGTGTAAATTCAT
TGGCTATCTACAAAGCGGAGAATGGATGGAAGAAGATTTACCATTGGACT
AATTGACATCTTGATTCTATTTGATAGCTAGTATGTAGTAGCAGATCGGA
GAGGATGTAAAATCCCCTCAGCGGCACCCCTCATTTACGtgataataata
atttttagcTCTCCCACGATCAAGACAATCGGAAAAATCTGTTTGTTCAT
TGCGCAAAAATAGTTAAAAATCTGCAATACATCATCACACACATAAAAGC
CAAAATCACGCTTTTTCCCgccatttttattttgaagctaaataaaagtt
aggaatttatagaaaaattcatggcaaaagctctattattttaGGACAGC
Cctccccccctagtacgaatagggttaaaataattattttatttttaaca
tttattcaatttttctttcgacttttttgaaaccattttaccttttttga
ttttgcgGATAGTGGGCCCTAGGACCTTTTTGCACTGAAATATAGATAAA
TACCAGTGGAGTGATGAGGGATCACGCTAGCaccccaaaaatatttttaa
ttatgACATCACGTCGGAGGATAATATCCTCTCATCACGGCATCGCACCA
AAAAATTCTCTTATCACTTATCACCCTTTGTCCAACAACAAACATAATTT
GCATCCTGtctaatattttttacttaaacTCACCCtaaaagtcgaccctg
tcagatacaatttttaaagattAACGATTTTGTGACCCTTTCAGATATTT
TCAGAACATGAAATAGTGACACTGACCAGTGGTGCGCGTCCcg
Run BLAST on NCBI

transcript from alignment at scaffold_375:104288..118384+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062952 ID=TCONS_00062952|Name=TCONS_00062952|organism=Clytia hemisphaerica|type=transcript|length=14097bp|location=Sequence derived from alignment at scaffold_375:104288..118384+ (Clytia hemisphaerica)
GCTGTAACGAGGTCTTTGCCACTGAGCCCAGTGTCATCTTCAAGGATTTG
TCGCAGGGTGATGTTCGGTCTACCAACACGTCGATCTTCTTCGGGGGTCC
AGGTGAGCAATTTTCCAGCAGGTTCATTATGTCTTAAAACATGACCGGCT
AAGGCTAAGCGCCGGCGACGGACAGCATTTGAAATGCGGGGTAATTTACC
GTAGATTTCAGAAATAGTTGGGtgattcttccaagaaatattgaAGGCTG
ACCGCAGCATTCTTGTGTAGGTGCCGTCAAGGCGTTTTGATCGGGAGATG
TTTAAAGTCCAAGATTCCGAGCCATATAGCAGTATAGATTCTACACAGGC
TTTGAATACTTTGGTTTTGGTAGATTCAGAAATGTTCGATTTCCATACTT
TGCGAAGGGAatgcagtgccgtaggaagcatttttatattgagggggctg
aagtttagtgacaccgtgAGGGCCAAccggtttggcccgaggggggaatt
ttgaaaatttgagctgtagattgcttgaaaatgcactcaaaacaaaatgc
tttcgagaaaaaacaacataaaactttgcattttgcaaaataaccattta
aaaaaaagttatttggcGGCATagcagttgctacggcactggaATGAAGT
GCATTCCAGGCTTGGGCTATTCTAACATTCATATCGTGATCTGACTCAGA
GTAACTACCAAGATATAGAAAATAATCAACTCGTTCGATATCAGAGCCAT
CTAAAGAATAAAGTTTATCGTCGTTAGTGCGGTTGATATGGATAAATTTC
GTTTTTCTGGCATTCAAGAATAAACCTACATTTTGACATGCCTCCTCCAC
AGCACGAAGAAGAGATTGAGcagtttgaatatgattttccaGTAGAGCAA
TATCGTCTGCGTAATCTAGATCAGCCAGTAGTTCAGGGGGATGTCTCCTA
ATTCGACGACGTTTTAGAGTGAGACCATGGTCACTGGTGATTGAGGATTG
AAGAGCGTAGTCCAGAACGATTATAAAGAGAAAAGGTGCTAAAGGGTCTC
CTTGAAGAACGCCAGTACTGATTACGAAAGGATAAGTTTGTCCTTCTGGG
GTTGTAACCGTGGCAGAAGTATCTCGGTACATTACTTTAATGGTCATTGA
CTACAGTTTCAGGAATACCATAGGCTTGGAGAATTTGGAACATACGGTCA
CGATTGATAGAGTCAAATGCTTTGCGAAAATCGATGAACGAAATGACTGC
ctcttttttgtgatttttaagtTCTTCTACGATCCTACGTAAAGCAAGCA
CATGGTCCGAGGTAGATCGTCATTCACGGAATCCATTTTGATTTGGGCGT
AAAAGTTTGTCAACAACAGGACGAATGCGATTCAGTATAATGCGATTATA
TACTTTAGAGGCAATTTGCGAGAGGGCGATACCACGATAATTATCAGGTT
TTGTAAGATCACCTTTCTTTGGTATTGGAATAAGAGTCGAAATTCCCCAC
TCATCAGGGCGATCGCCAAGAAAAGTTTCGATACAGAATTTGAGGAGGAT
GTGGAGTCAAATATATTCTGCCAAAACATATGTACCTTAACATGTAGCTA
CCACACTCCCTAAGTCAAAGAAGGTACAGGTTAAACGGTGGACACATTaa
atattgggctcttccagaaaatatctttacatgggggtggaggatatatt
atccAAGGGGtggcaaaaaatcatcaaattttgctctgtccgggggtaaa
tttgctctgtccggggttAATTCGGGTTGTCCGgcgggtcaactgatgct
tgtccgggggtaaaacccGTTGCCCGGGGgctcaaaagtcactttgtcca
gGGGGgtaaaatcactgaaaattgtactactccacccccatattcaaatt
ttttctggaaaagcccattgacaTATTATAAGCTTTAGAATATCAActtt
tgttgatcaaaatccAGAAAGTTTCGAGTGCTGTTTAAACTCCAGATCCT
TGACCTAGCTTTAGAACAAAGTTGAGTGATATAAAATGATCATGTTAACC
GTATTACCGAGAAGCTCGTTTCCTTagtagaccagcgtccgagattcaga
aAATACCTTAAACaagttttcgtagggcaccccttagatccgGGCAAAtc
tttgatattatgctcctaatagggtgtaggaTTGACAAAAGGAATTTGCC
CTTCGAGTCtactgcagttttcgagtgaatcgatttttagtgaATCGATG
GAACTTATCAAGGGACCCTTTACTAGCGGTTTTTCTGAGGTTTAAAAATC
AGATATCTGatgctaccaacggattcagtgTGAAaggtagataaagaaaa
tggggttatttgttaaatttcgaccatctggtgccgagaaatggcattta
tAAGGCGAAAAATCTATGTTTTGGGCGTTTTCCGATGGCGTCAGCATTTT
GCTGGgagattttttaggaaaaatcattcccacagctAGATAACTCTGat
ttagtagtatccaaaaatggtattatTTATTAgctttcgatgtctagatc
tcgatatatttttgttcaaatattgaaaattatcgatactTTTTGTCGAG
TTAGCAGTTTTTCAGTATATTTACACCCACCTTAAAATtaattatctcga
gatctagacactAAAACATAACAAATCATTCACTACCTCGACCGCTggtt
tttctgttgtttttttgtgaattttcagataaaaagcCAAAGGTATATCG
CAGAACTAATTTTCAAGGTAAACACTCGAAAGCAAGAAAACGTTCTCCCG
TGGGAATTAGTTCCCTAAACAATTAGTTCACGTCAAAATTAGGTAAACCG
AAAATCAGCTCTGTATCAGCTTTTCTTATTCAATTTCTCTTCTCAAGGCT
TTACCTACAATCCTTCATCAAGAATTATGCTTACGGGCATGCGCAGGACA
AAGACGTATACATCAGAACAATGATATCACGTTTGTATTTTGAGATCAAA
ACAACAGCGTTAGAAACATCAGTCAGAAAGTTCCATACGCTCCTACATCC
AATCTCTGAAGATCAACAATTCTTTCATGAAGCTGTCTATTTATCCTCGA
ATACAACAACCAATGAATTTTTCTCATATGTAAGTTATACACCTACAGAA
TGATTCGTTAAATTCGCgatgtaatgttttatacggaattATCCCAAAAA
GACCGGTGTCTGcaacaaattttgaatttaaactataaaactagtggcaa
aagGCCCGGGCTATTTTGAGTGCtcccgtataaaacattacatctggaat
atcatgaatacgtaAGCGAATTATTTTTGAATCGCTTTGatcgaaaattt
gaattgaaaatttgaattgaaattaAAGCTGTTTATCgagattattatta
ttaagaAATAGCGCAGCACTATATTAGGATTTAGGGTAGGGATGTTTAGA
CACCCTTTTTCATAATTCTGCAGAAGCAAAGCTGAGTTCTCAGAAATCGC
GAATGATAAATTTGTTGTTTCTTTGTTTGTTCGAGCCTCACCGGATCTGT
TAGTCTAGAAATCTAAGCAAGTTTGATTTCACTAGGATAAATTTGATAGT
AAGTAAGATGTGACTGAATAAGGTAAGCTTAACATCCGTGAATATAAata
atctttaaagcgccgacaACGCTGTATTGCGATAAGCAATGTCCTATCCT
TGTGAATACGGAATTAATTAACTAGGCTATGAATCTGTTTGGTTCTCAAA
CGGTTCTAATGGCTAGTCAAAATACATCTTCTGAGCAACAATGTTTTCTG
TTCTTCTAGGTAGAATATTACGACCCAGTATTTTATCCAGGCTACTATTC
CATGATGAATAGATTCTACCGTAAAGTGACAGAACCGATGGAATCAGCAT
TTGTCAACGGTCTTCGGTATTCGATCCAGACCGATGTCACCTTTTGCGGC
CGAGATGTGGAATGTGATGCCAGTAAACCGACAATTTTACAACAATTGAG
AAGCGCCTCGCTTATTCCTTCATTCATGCAATCCAATATCCCGCTAGGTA
AAAGGTTCTTTTTATcccttaaaagttttgtttttaaataagaatgatat
cgtttgattactcatcaatttcaattcacaagctttttcacatcgGATCG
ACActgcaagattggtcagaaagatgaaaagaaaaacattttgcttatat
aagcatatATATAGACACTGTACTGATAACGAAATACGTGTCTGATATGG
AACGGGAACActtgtataaaaacaaaacatttaaaatctCGTTTCTCTTT
TCCATCTCCTTCTCTCCAGTACGTTTTTTAGAAGGGATTAAACTCAGTAT
TTTCTTTGTACAGTCAACTCTCCCTAAGTTCGagtttttctctaattcga
acttggGTATTGTGCTCCCCTCAGTTGGAACATTGTGTAAAATGCAATCC
ATgattcgaatttttctttaatcTCAAAATTCTTTTGGGTCATTAAGGGA
TTAAGATTTTGGCGTTATGTGtaatttgggctatttttcgctaatttttg
tgACAAAAAACATAATGATCTTCGTAATTGCtataagaataaaaaatatt
tagctTGTTTGCTTGATACGTGCAGCCTCATGCTAGGGCCTCGTGATAGC
AACCTTGCACAAGAGCTTATTACTGCATATATTGTATTATCAATCTCTTT
TTATTTGGTTTAAACAGGAAAATTCCGAATCAAATTCCTTCAAGGTGGTA
AATGTATGAACTCCTATCAATCAGGCTCTAACATGGTTGTCATTGGAGAC
GCCAAATGTCGAGATGTCTGGGCATTCGGTATGCACCTGTACCCAGAACA
TCCTTTTTCCTTATGGAACATCGAGCTTGGGTTACGAATCACTGGCGATA
TATCAAAACAGTTGCAAATCTCAGACTCTGCTAATTCACCAAATAAACAC
CATTATGCATTGGGAGTCAACAAGAACACACTAGTCCTACCGACTTCACC
TTACAATAGAGGTGCACGATGCGTTCTTTACAATTCAAACAATAACAAAG
TGGAATTAAGCAACACTGAGTTGATTGGTAATGCAGGCCATTGTACAGCC
AAGAAAAATGGACATGTCAAATTTTTACCAGGTACAGATTTtgtatttac
tttttatcaAAACGTACAACACAGGTATCTtattatatttcttattttta
aggATGACTGTAAAACTCAAACTCTAATGAGATATGATATCTGTATTTTC
GGATAGAATTGAATAAATGTCCTTTAAAAACGGGAATTTTCTTATCTGCC
ACTCGTTGTAGAGACTTTTtaccgacacgctaaagctctaaaggtcggaa
aattttcaacacctagaagatttgaattacagaatTTCGCCTGACCGTGC
AACGAATTCTGCAACGGGGGTCTTGATCCCAGCCCTTGTTTTGACGGATG
GTCGGTTCGAACTGTAATTTTTCCAGTGCTTAGGTGTGAGGATAGTTGAA
CCCGACTAGGGGTGCAGCAGATCAAAGGTCGACTTTCaatcctctccgat
gggaaatttgCCCTTTTCCGTTTAGAGCTTCAACGTGGGCGTGGGTGCtc
gccccggggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNgggccccccccccccggggtgcTCGCCAAT
CCGCTATCGGATTACTAGATAAGTGCCGCACTGACTTGTAAGTGTTAATG
CAtatctttattttaaaatttattaattttccaTCACATTTCCTTACTAT
CTCCAGGGATCTCTAGAATATGTACCTAAGTTACTTCCGGACCCTCGACA
GAGTCGACCTACATTTTACATGTTGATTTGATTAAACACAGAGAAAAGAA
GTGAAAAAGAGTAATTTGATTATATTTTAGgtatatttaaataaaaaaag
aaaagtgataaacaaaatattaaaacagaGATGTTAGCAGTACaacagag
aaaaaatttaattttgggaGCGTCCGAAAAAGAGACCATATATCTTTGAT
CGCAACGATGACTTTGTTGCCTCCCTTATTCCAATATCTGAGCTACCATC
ATAATGGTTTTCTACAACCGAATCCTCGGAAACTTCAACCCCCTCAACTA
TTTCACTGTTTCTATCATCACGGTTTAGTGTTCCCCCTGTTGTAGAAGGA
GTTATAAAATTTTGGGTGCAACCGATCGCGATGGCTTCGTGGTGAGAGCT
ATCAACACTTGATGCCGATGATATGTCTGGTGAAGTTGTTTTAGTTATGG
ATTGCTGTTTTCCAATGTACTTGCTACCGCTTGGTTGAGTCTGGCTTGAG
TCTGATCCTGGACTTTTTGTGCTACATGATGTATTCTTTGATTTGAGGCT
TGACTTAACGTGCTCTAGCCTGGTTTCGTGTTTAGTTGTAATATGTTGCT
GAATCGTATTTATCATCAATGATTTATGTTTCTCGTTGGTTGGTTGGACT
CCAATGTCAGTGACGGAGGATGTTTTGGTATTTGCTGGAGACATTGCTAA
ACCATTCTCTTTTTTAGTACACAGTTGATTACCAGTGATGTTCACGGTAC
TAGTTATTTCGATTGGTGGGTcagtatcaatgagtgttccatGGTGACTG
TTCAAACTTTGGATTTTATCGAAACTATGACTCTCGGtcttttcttggga
agttgtttCCAGACAATCGATTGGTTCGGTGTCTGGTTGTTTGTTGTTAC
TTTCTTGAACACTAAAAGAAGACGAATCTCCTACGTCctgtaagctactt
ccaactaCTGCTACTGTATTGCCCAGGTCTTGACTTGGGTTTGCTGTGCG
GTGTTGTGTTTGACTGCCAGAAGTGCTAGGTAATAGGTTGATCAAGGTGT
CCCCATGAGGTGTAAAGTTTTCGACTAATGGAGACCTACCGAGATTATTC
GTTTTTCTTGATTGAATCATAATATATGAATCATCTGATTGGCTACCATT
CAAAACAGTACAACTCCTGTGTCCAAAATAATGCATGGGTTTCGTTGCAA
TTCCGATCGACGGTTTTTTATGATGCGCATTCAGAAAAGCATGAATTGAT
TTCTCACGAGCGTGCTTCATGGTTTGGCtttaaagaagaagaaaagagtG
TTATAGTAGGCCTAACTGGTAACGTAGTTTATAAAACTCGTGTAAATTTT
GAACAAAGTGTGtttgaaatttctttgaaatttttttgtgtgaaatttcc
ataaaaattgtGTCCCTCGGCTGTGGCCTACGTTTTCACTGAATGGGTCC
AGAAATAAGGGCTATCCTTTTTTCTTTCTGGGCAgccattctgataccaa
tctatgctttgttccaaatttgcTCAATAATTACACCATTTTTTTTTAGT
CAGATATTTGGCCACTTATCAATCAATAGTTATCACATATCAACGAAGAT
TATGGTGGTAATCAAATTGTCTTAAATAAATGTCAAAAACCCACTTTCCT
AAGCCCAGCCAAAAATGCGTTAGTTTATCCCCCCCTATAGTTTTAGGCAC
ATCGGTGGATCGTATGGAGAGTTAAGGTTAATTCTGAAAAGTTTGAATCA
CGGGAAAAGGTGTTACATTGACATGGTATTCAcattgaaaacttttgaaa
tgaaGACGAAATTGGCACATACCGTTTAAAAGGGTTGCTTCCTTTACTTT
TGTTTCTTGATAAAGTTCTTTTCAAATCCACAACCTGTCCAACTAATGAT
TTGTTATGTTCCTGCAGTTTCCCTTTCTCGTTAATATGTTTATCAATCGT
CTTTGTGTACATATTCTCGGCGTCGCTCATCTCGTCAATTTTCTGTTCCA
AATCAGCCTTCTCTGATTTTAATGAAGCGATTTTTGCCGCGCTGTCCCGT
TTTGCGgttaagtatttctttaccatcTTTCCAAACTCACCTTTCATTCG
ATCTAGCTCCTCCTTTCCTTGGGCTACTTCTTTGGTTAAATATTCGGTCT
CTGTATTCTTATCATTAACCTGTTCTTCCAATTTCTTTTGTATCTTTAAA
TGATCAGCACCATCTTGGATCATTGTTGAAGTGAGGACTGATAttctttt
ggtcaaattttcgtTCGACTGCTTGAGTGAACGAAAATCTTCGGAGAATC
GCTGCTCAGTCTCTTGAACAATGTTCTTAATCTGTTCGTTAAGAATCAAA
CATTCATCTTTAACGGACTTCAGCTCTCTAATCAACCTTTCTACTTTATC
TTGGCTTTCCTCCAAGACTACATTTTGCTGCGCTAAATCATTGTTCTTTT
CTTTCAAGATAATATCGTGCTGAATCAAAACTTGATCATTTTGGTGTAAA
TCGTTTTTCAGCTTCGATACATCCATATCCAGTTTAGCGATCGTATTGTT
TAATGTTACGACCTCCTTTTCAAGTCTTTGACTCTTGCAAATAGCCTCAT
CACGCTGGATAGAAACTTGATTATTTTCTCGTTTGAGCTCTTGTTTTAAA
GTCTCAAAACATTTATCACGCTTCTGAAAAGCCTCCTTTAAATTGATAAA
CTCGCCGTTAAAACTTTGTCTCAACGATGATAAATCCATTTGCGATCGCT
GTTCGCGTTTTAGAAGGAGTTCTTTCAACTTTGTGTTATCCTCTTCGAGG
CTGCGTTTATCCGATAATGTATTGCTCAAAGTTATACACATCTGTTTTAG
GGTGAACTCGATTTGCTGGAGATGTCTTTTCGACCCGATTTCATCTCCTA
GTTGAGTATTCCCCTTGTTTTTACAATGTTCAGTTTCGATTGGAAACTGG
CCGTTTGAGAGTACAGGTGCGTAATCATCTACAACGTGCTCTATTGAGGT
GCAGTTGTCTTTCGAAGATAATGGTGTTTGGTAACTGTGAGCATTTCTCT
CTTTGGGTAGTGATTGAGATTGTACATCCACTGAGGGCGGTAATTGAGAT
TGTACATCCAATGCGGGCGGTAATTGAGATTGTACATCCAATGCGGGCGG
TAATTGAGATTGTACATTTAATGCGGGCGGTAATTGAGATTGTACATTTA
ATGTGGGCGGTAACTGAGTTTGTACATCTAATGCGGCCGGTAGTTGAGAT
GCTACATCCACTGAGGGTGGTGGATGCAATGAAACATCATCGGTGATAGT
GCTACATTTATTTAAGACCGATTTGTTACCATCATCATCTTTGTCATTAT
CCGATTTTGAAAGGACACTATCTACATGTTGTTGCAAATGCATATCGTGT
GCATCTTTTGTTTCGTCAATCGATCCTTCCTGTTGCGAGTCCTCGTGTTG
GTCTTCGTGGCCATTCTGAACAGTAGCGTTAACCATACTTGAGCTGGGAT
CCTGTGTGTTACTTTGAACACCGTTGGTTGTCTCGACGATATCACCTTCA
TGTGACTCTGATTGAGAGTTTAATCGAGCTGCATCATCTTCAATGACATC
TGCTTCTTGTACCAAACCTTCGTTATCTTCAGGAGGTTGCTGAACTTGAT
TTGTTTTGCCAGTGGCTAGATTTAGCAACGATGATACGAATCCGGAAATG
AATCTTGACATCTTCGGCGTCGCTGCGGTTTACGTTATAATAACTGCTTT
CTGCGAATGTCTTTTTTCATAACTACCAATTCTTTGATGCGAAAGCTTTA
ACTTTGTGGAAAATTGAATCGTTGCTGTGGCGAATTACATTCTGAAGAAG
ATAATTGACGTCAGATTTCAAATATGCCGTCAATTATTATTCTTAATATA
TCCGGCTGTTTTATTCACTGCGCATGtcacaagaaaaatatttaaaaaac
gtGCTACCTGAAATCTTCCttaataagtaatagttatcggacagttgcga
gtacaatatgaggaATATTTCACGAGTttcgagatttttccgtacaatat
ttttcgagcctttaggcgaggaaaatatacgaaaaatccggaacgagtga
aatattttcatattgtactcgcaagtgtctgataactggtttatcggtga
cccaaaaaatggaCTGTGTATGTTTGAAtaaaagcgcagggcactttttt
agcaaaatgacgttagattgctgctaccgctacaatgcaacaacatcttt
tcgtcaatttatattttgtacatgtaaaatacaagatatattgtactctt
tttaaccaatcagattgcagatattttttggatcaccGATAAAAGCTCTT
TCCACCCCTGTCTCGCCCGTATCAAAttactttttgaatgttctatGTCA
AACAGATGATCTGACATATACCCCTAACAAAAGAAGTCTTTATTTGAAGA
GATGAtgttttctgttaaccaaaaaGAATTGTTTTAGTGGAAAATCTGTC
TTTCCTTGTTAGTATATGATTGGAATAGAGATCTGTTGTTCCCAGTTCAA
AAAATCTAGAAGGGTGTTTTCATGTGCACAGTTTCTTTTGTCTGTGACTT
TTGAAGGAAGTCTTTATTCATAACAAGATttggtaccgttggaaagatat
tcgaaagcacaatattttgcattaGTCTTTGTCTTAAAAAAATGAGGCAA
ACGTGTGTATATTTAGAATTAGAATAATAATAACTACCCAGAAGAGTACA
GAAGGGTCAAAGTGGTAAAACTTTAGctttttgtttgcttgattttctTA
TCGTGCTGGTTCAAGTTAAAATAAGATTTAAGTCAAAATCCGTGTATTCA
ATTCTTGAATAGaattattaaattttaaaattttctgaaatttctttctt
tttcagattattCTGCACACTACGACCGATTGAATATGAAAAGTTTGATG
ACAACAACTATCACTTCAGGAGAAGACATCCTCCTTGTTTGTGATCCTAA
AAGAGACTTGTAAGGACTTCGTACTTTTACTGTGGGTGACTGGTGAAAAT
CAACCATCTCACTACCGTCACACCGACACTTTCTTTACTGCTCGATAAAT
CCGAAATCATTTTACAAAACAATGTAAAAAGTTCTTTCATCTCAGACTTT
ATtgtagccagtaccttcccaacaacaaactttttctttgttaaatcgcg
ataaaaaagcggttttcgtctaacaggctaacTTTATTGAGGCTTTTCCA
TctcaaaattcaacaaagttcgGCAAAATTTAAAGAATCTTGCCCTATTT
GTTGTATAAAGCcattctcatctgagacaaaaaaCCTGGCTTTGACCACG
GTCACGTCTCTTCGTAAAGTAATTGTTAGAATAATTCATCTAAATGTTAC
GGCTAGTTTAGGTTTTCGATTCAAAGTACAGAGAATTGAGACAATTGAGA
ATGTGAAGTGACGAAACTTCTtgtgtttttaatttcaaataggAAAGTCA
AATCGAATTGTCATTATTCTAAAGACAAGCAATTCACGTGGACAGGTATA
ACTTTCATTATTCTTAGGTATTATGTAAAAATCCTGTTGAAGAGTCCCAG
TTACATTACAGTTGTTGCCTCTCCCCTCAAATGGATTTTCAAAGGACCAA
ACATTTTCTTGGAACCTgagaatcagagtttcaaattACTGAGAGCATTT
TGAGCGACTTCCAAACTGAGCGGTTCAATCTTTTAGTTCAAAAtacagaa
atattcgaataatagaggctCGAATTTGAGTGAGAGTCGACTTAATGAGA
CTGGAAATTTGGGTCACCTTTATTGGAAATTCGCCTCTGTTAATCATCGT
AATTCGGGATTTAAAAAATAACGTGTTTACCCGGTGAAAGTTTATTCTGG
AAATCTTTTAAGTTCTTAAACCCTTTTGCTTCAGAGACCCAATAGACCCA
TAACACTTGACGAATGTATTTTTCCAAGCCAGAGGAAAGGGGTAATTTTC
TCTCTACTGTGTTTTTTCATAACATTATTCAAAATCTACGTTCCAGGTCT
TCCATCACTTGTCACCCAAATCACTTTCTACATCCCATCTGATGACCTAT
TTTACGGTTATTGTAACGAAGTCAAATACCATTGTTCCTGGAGTCTACAA
TCCAACAAGGTTTTGGCGATGGATGATGCAAGTTACAATGGCAAAttagc
tgatgtcagcaaagTTGTAGCAAGTAATCTTGACGCTCAAAGTCTGTGGC
TCCCCAACAATGTCCAAATATTTAGCCAAGACGGCGACATTGGTGGTAAG
TTGTTATCTTTTTATCATTGTCATTGTTTTTGCAATttaccttttcgacc
gtagccgccaattgacgcgcgggtattttttttgtccactttatcccact
ataaccgtcccagtccttttttcgcacctatagacaataaaaatgtgtca
aaaaaggattggatcgagtttagtgggACAAAGTGGggaaaaaaatgccc
gcgcggcaattggcggctaccgTCGAAAGGTGTATTCAACATTTCTTAAC
CATGATTAGTAATGAGATGTgctcgtttttttataagaacaaactatata
agaacataaggcttcgatggcaaaaatgttaagtacaatttagaacattt
tcaggctttgcggactctaaaacacccgatttcctaggaaaatggccaaa
aatgctcaaaaactggtcaaaataagaacatattaaggaCATTTTTGGCg
tgaaactaaaaaagttaaggactttcgaaggcttcaaaaattttggatgt
tcttataaaaaaacgtgtacttgttAAAGTCTATTCGCATTAACTGTGTG
CTAATTTTAGTTTTGCTTTCCATTTTTGCTTCTAATCTAACAAAACATAT
ACCATTGAAAAGACATGATTTAGAGgaatatattcaaaaattttataaaa
taaagatgaaaaatgaatcaacaaaaaactttttaccatCCTCGGTACGG
AGGTACTTTGAAGTATAAAATACGGAAATATATAGAGTTGAATTATATTG
GATAAATGCCTTCTTGAGCTCAgcttcaaatatatttttttacagTAAAT
TCATTGGCTATCTACAAAGCGGAGAATGGATGGAAGAAGATTTACCATTG
GACTAATTGACATCTTGATTCTATTTGATAGCTAGTATGTAGTAGCAGAT
CGGAGAGGATGTAAAATCCCCTCAGCGGCACCCCTCATTTACGtgataat
aataatttttagcTCTCCCACGATCAAGACAATCGGAAAAATCTGTTTGT
TCATTGCGCAAAAATAGTTAAAAATCTGCAATACATCATCACACACATAA
AAGCCAAAATCACGCTTTTTCCCgccatttttattttgaagctaaataaa
agttaggaatttatagaaaaattcatggcaaaagctctattattttaGGA
CAGCCctccccccctagtacgaatagggttaaaataattattttattttt
aacatttattcaatttttctttcgacttttttgaaaccattttacctttt
ttgattttgcgGATAGTGGGCCCTAGGACCTTTTTGCACTGAAATATAGA
TAAATACCAGTGGAGTGATGAGGGATCACGCTAGCaccccaaaaatattt
ttaattatgACATCACGTCGGAGGATAATATCCTCTCATCACGGCATCGC
ACCAAAAAATTCTCTTATCACTTATCACCCTTTGTCCAACAACAAACATA
ATTTGCATCCTGtctaatattttttacttaaacTCACCCtaaaagtcgac
cctgtcagatacaatttttaaagattAACGATTTTGTGACCCTTTCAGAT
ATTTTCAGAACATGAAATAGTGACACTGACCAGTGGTGCGCGTCCcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039432XLOC_039432Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062952-exon-scaffold_375-1491911889:104288..104389TCONS_00062952-exon-scaffold_375-1491911889:104288..104389Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1510915933:104288..104389TCONS_00062952-exon-scaffold_375-1510915933:104288..104389Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1575043694:104288..104389TCONS_00062952-exon-scaffold_375-1575043694:104288..104389Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1491911889:107185..107416TCONS_00062952-exon-scaffold_375-1491911889:107185..107416Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1510915933:107185..107416TCONS_00062952-exon-scaffold_375-1510915933:107185..107416Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1575043694:107185..107416TCONS_00062952-exon-scaffold_375-1575043694:107185..107416Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1491911889:108097..108334TCONS_00062952-exon-scaffold_375-1491911889:108097..108334Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1510915933:108097..108334TCONS_00062952-exon-scaffold_375-1510915933:108097..108334Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1575043694:108097..108334TCONS_00062952-exon-scaffold_375-1575043694:108097..108334Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1491911889:109005..109418TCONS_00062952-exon-scaffold_375-1491911889:109005..109418Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1510915933:109005..109418TCONS_00062952-exon-scaffold_375-1510915933:109005..109418Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1575043694:109005..109418TCONS_00062952-exon-scaffold_375-1575043694:109005..109418Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1491911889:115394..115496TCONS_00062952-exon-scaffold_375-1491911889:115394..115496Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1510915933:115394..115496TCONS_00062952-exon-scaffold_375-1510915933:115394..115496Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1575043694:115394..115496TCONS_00062952-exon-scaffold_375-1575043694:115394..115496Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1491911889:115980..116032TCONS_00062952-exon-scaffold_375-1491911889:115980..116032Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1510915933:115980..116032TCONS_00062952-exon-scaffold_375-1510915933:115980..116032Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1575043694:115980..116032TCONS_00062952-exon-scaffold_375-1575043694:115980..116032Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1491911889:116534..116782TCONS_00062952-exon-scaffold_375-1491911889:116534..116782Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1510915933:116534..116782TCONS_00062952-exon-scaffold_375-1510915933:116534..116782Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1575043694:116534..116782TCONS_00062952-exon-scaffold_375-1575043694:116534..116782Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1491911889:117583..118384TCONS_00062952-exon-scaffold_375-1491911889:117583..118384Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1510915933:117583..118384TCONS_00062952-exon-scaffold_375-1510915933:117583..118384Clytia hemisphaericaexon
TCONS_00062952-exon-scaffold_375-1575043694:117583..118384TCONS_00062952-exon-scaffold_375-1575043694:117583..118384Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_375supercontigscaffold_375:104288..118384 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.106973	0.116433	0	0	0	0	0	0	0	0.10575	0.08493	0	0.338178	0.128963	0.128803	0.128491	0.173554	0	0.55076	0	0.0312717	0	0	0	0.732196	0.00024482	0	0.0959119	0.181398	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062952 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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