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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062887 ID=TCONS_00062887|Name=TCONS_00062887|organism=Clytia hemisphaerica|type=transcript|length=949bp
caactttcgaaatttggtttttattttagtaagtgaggacagcgctaaat
tcgaatttcccactgtaaaaaatgtgagtccaatattggactcacagctc
agacccgtcttgtgtacatcaaattataaaaaaacacacgacgggtctct
TGTCTAACCACAAGTACGACGCCCAAACTCACCCCTTAAACACACGAGAT
GATGTTAGTGATCTCCCACTGATCTTCCAAACACGAAATGTGGAGATGGC
TTGTTATGTTTACGATCAGGCTTTTGCGCTCCAAAGAAAAGTTGTTTGCC
ATAATATATGCTGGTAAGATCACAAAGTAAATATTCGTAAAAAACAACGT
GCTCTAAACATGTTTTGATGACGTCCTCGTATCTGACGACGCTaccataa
aacaaaaaaaacgttGCAGtcgtttaaattttgttttatctACCTGAACA
GATTTTAGAGACTTACCTACACATTTCTCAAACCTGTCTTCCTACCACCA
AAGCTTGATAGACATTTTTACTTTTAGGTCATATATACACGTACGTAGGA
TagctttaaaaaaacttttctaggTTATTTTTATGAGCAATTGGATTTTT
GTGATCTATTTATTCTCGCCTTGTTGAGATATGACCACAAAAAGCAATTG
GATATCTCTTGCCAACATACTTCAATCTATCGACACTCTAAGCTCTCTCA
AAATTGTgggaaaatttcactttcacgTGCAAAAGACGAATCATTTTGCT
GATATCACTGCTTTTAAAGTTTTTCCCGGAAAACGTCAGATTGAAATAGT
TGATCTTTGTCAAAGTTGAATTTTCCCATCTATCACTGCTGGAATTTCTC
GGTAAAAACTCTTAGGATCATTTAATTATATATTGGAATTAAGGCCGCTG
ATATTTTCTCACAAGAGCATGATATTTTAACCGATTTGTAACTTTGGTT Run BLAST on NCBI transcript from alignment at scaffold_373:54515..55463- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062887 ID=TCONS_00062887|Name=TCONS_00062887|organism=Clytia hemisphaerica|type=transcript|length=949bp|location=Sequence derived from alignment at scaffold_373:54515..55463- (Clytia hemisphaerica)
CAACTTTCGAAATTTGGTTTTTATTTTAGTAAGTGAGGACAGCGCTAAAT
TCGAATTTCCCACTGTAAAAAATGTGAGTCCAATATTGGACTCACAGCTC
AGACCCGTCTTGTGTACATCAAATTATAAAAAAACACACGACGGGTCTCT
TGTCTAACCACAAGTACGACGCCCAAACTCACCCCTTAAACACACGAGAT
GATGTTAGTGATCTCCCACTGATCTTCCAAACACGAAATGTGGAGATGGC
TTGTTATGTTTACGATCAGGCTTTTGCGCTCCAAAGAAAAGTTGTTTGCC
ATAATATATGCTGGTAAGATCACAAAGTAAATATTCGTAAAAAACAACGT
GCTCTAAACATGTTTTGATGACGTCCTCGTATCTGACGACGCTACCATAA
AACAAAAAAAACGTTGCAGTCGTTTAAATTTTGTTTTATCTACCTGAACA
GATTTTAGAGACTTACCTACACATTTCTCAAACCTGTCTTCCTACCACCA
AAGCTTGATAGACATTTTTACTTTTAGGTCATATATACACGTACGTAGGA
TAGCTTTAAAAAAACTTTTCTAGGTTATTTTTATGAGCAATTGGATTTTT
GTGATCTATTTATTCTCGCCTTGTTGAGATATGACCACAAAAAGCAATTG
GATATCTCTTGCCAACATACTTCAATCTATCGACACTCTAAGCTCTCTCA
AAATTGTGGGAAAATTTCACTTTCACGTGCAAAAGACGAATCATTTTGCT
GATATCACTGCTTTTAAAGTTTTTCCCGGAAAACGTCAGATTGAAATAGT
TGATCTTTGTCAAAGTTGAATTTTCCCATCTATCACTGCTGGAATTTCTC
GGTAAAAACTCTTAGGATCATTTAATTATATATTGGAATTAAGGCCGCTG
ATATTTTCTCACAAGAGCATGATATTTTAACCGATTTGTAACTTTGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062887-exon-scaffold_373-1575043694:54515..55463 | TCONS_00062887-exon-scaffold_373-1575043694:54515..55463 | Clytia hemisphaerica | exon |
| TCONS_00062887-exon-scaffold_373-1510915933:54515..55463 | TCONS_00062887-exon-scaffold_373-1510915933:54515..55463 | Clytia hemisphaerica | exon |
| TCONS_00062887-exon-scaffold_373-1491911889:54515..55463 | TCONS_00062887-exon-scaffold_373-1491911889:54515..55463 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_373 | supercontig | scaffold_373:54515..55463 - |
Blast
The following BLAST results are available for this feature:
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