TCONS_00006169 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00006169
Unique Name	TCONS_00006169
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2298

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000063:592579..601190-
coding sequence from alignment at sc0000063:592579..601190-

transcript sequence

>TCONS_00006169 ID=TCONS_00006169|Name=TCONS_00006169|organism=Clytia hemisphaerica|type=transcript|length=2298bp
ATTTGTAGTCGTAGTTCCTCACCAATACATACATACAGTaaataccaatc
tgaagttgaggaAGCCAAAAAGAAAAGAGCTGAAGAGTGGGAAGCTGCTA
GATCAGCTGGAAGAGAACTTCCAAACCCAGAAGAGCCTGTAGACACGCGA
TCACTGTATGAAAAACTTCAAGAACAGAAAGATAAGAAACAAGAAGTTTT
TGAAGATCAACTGAAATTCAAAAACATGATTTACAAAGGATTGAATCATG
AAGACGCAGAATTCTTAGGAATGGTGTCCAAGAAACAAGCTGAACTTGAC
GATCAAAGATACAATGAACATTCAGAAGAAATGCAACAGTACAGATCAGC
AGTGGACGAAGTAGCTTCAGGTCacttaaaaaagaaagaagaaaatcaaa
tgaCCAACAAACCCGCCATTGCAGACGATTTCAAAACCAAGAAAAACAAA
AGTCAAGCTGCTCTTCTCATGGGTGGCATCATTAAGAAAAGaaaaacaga
tgatgacgtcatcacaactCCACCAAAGAAATCGAgggaagaagaaaaga
aaaacactacCACAGAAGaaGAGACAAAATCGAGTGGGAATTCGTTATCC
ATTTTGGCTGGTTATTCTTCGAGTTCATCCGATGgtgaaagtgaaaatga
ttGAGGGAATTTGTGCTGGTGGAGGTAGTCGAGAAGAATTGTTGACTTTC
GACGCAAATATTGAATTGGGGATAATAATTTCAAAGATATTACAAATTGA
TGGAACTTATCTAATCTTCGTCCACCAACTTTACACGCCACTTTCTATTG
TCTAAGTGACATGTTCGCTCCGGAACAAAATAAAGCCATCTATTGGTTAG
AAATGACTTAAAACTTGAATTTATCCTAAAGAAtagcttcatttcgtttc
ggagtgaAACGGAACCGTTGCGTTTGAACGTGGTCTAAGAGACATGTTGT
ATTGCAGATTCTAATGAAAAATTGTTCTTGCATGTACATAAGGAATTGAC
ATCGGaatatctgaaattttcacggtATATTATGGTATTTATGGTATTGT
TCTCTTCGGAATGAAAAACGAACACCGTTGAATTATGATCGGATCATATA
AATGGCTGGTCATTTCTGGAATTCACAATCTTCCTTTTCATTCTGCGATT
TTTGTCAATACGATTGCAAAGAAATTCCGTTGTTTCAAAAAAGCGGAGAG
ATGTTCAATTTGCCATTGAAAGCTCAGATACGAAAATATACGATGCAGAT
ACAATGATGATGAACAATTCATAATATTATGAATAAAATCACGTACCGAA
CGGAAAGGTTTAGTTTACACTTGAAATGGATATTTTATTCAGAgatataa
aagaaattttttgattttcaaattttaccaaaagaTTATATCAAGACATT
TTAACTGTTCTATCCTGACTACTTCATTTAAaagggcataaaccgaatgc
ttttagaaagagtatgAAAATAGCTTTTCAATGGTACCAATGTTTTGTAT
TTTCGCCGAGAAGATAatcaggagtggaatattgtGAAGTTAtaaatgaa
ttcaaaaataaaactgaaaaaatgaaaaagtatgGTATGGTTGCCATCAT
CTCAAGAGAAAtattatcactgtgaaaaactttttgaattaaCTTATTTA
ATAGATATCTTTCCCGATAAAGCAGATTAAgcataccttaaaggaagaaa
ttttggcgggaatttaatttggcggatggccgaaaaagttttttcagatg
gaatttaatttggcggttaacttgaaaaattatatttggcgggaatttaa
tttggcggatgaccgaaaaagttttttcagatggaatttaatttggcggt
taacttgaaaaattatatttggcgggaatttaatttggcggatgaaggac
atttttgtccaaaaaacgccattaaaaaaggaaaaacctgttttaaagcc
tgaaatagcacacatttgggggaataaatagaacaatttaaatttggcgg
gaatttaatttggcggatgacggaataaattaaatttggcgggaactaaa
ttGGGCGGATTTCgacaaaatccgccaaatccgccaaattaagttcccgc
caaaatttcttcctttaaaggtAGGTGGTTTTGGACcacgtcgaacttat
cagagaaAGAGATTTATAATTTTAACttaattgtcttttaacgagcgttg
ttctccttcgcatgtttccaaCGTACTTGCTCTATCGTCTATAACCATCT
TAGAAATATTTAGTCAATTCTAAAAACCCGTTGACACTTTGGTAGGGG

Run BLAST on NCBI

protein sequence of TCONS_00006169-protein

>TCONS_00006169-protein ID=TCONS_00006169-protein|Name=TCONS_00006169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=217bp
ICSRSSSPIHTYSKYQSEVEEAKKKRAEEWEAARSAGRELPNPEEPVDTR
SLYEKLQEQKDKKQEVFEDQLKFKNMIYKGLNHEDAEFLGMVSKKQAELD
DQRYNEHSEEMQQYRSAVDEVASGHLKKKEENQMTNKPAIADDFKTKKNK
SQAALLMGGIIKKRKTDDDVITTPPKKSREEEKKNTTTEEETKSSGNSLS
ILAGYSSSSSDGESEND

Run BLAST on NCBI

transcript from alignment at sc0000063:592579..601190-

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00006169 ID=TCONS_00006169|Name=TCONS_00006169|organism=Clytia hemisphaerica|type=transcript|length=8612bp|location=Sequence derived from alignment at sc0000063:592579..601190- (Clytia hemisphaerica)
ATTTGTAGTCGTAGTTCCTCACCAATACATACATACAGTAAATACCGTGA
GTATCACAGCTCTCGAAAAAATATGGACATAATAATATTCTCTCCATAGA
AACTTGGCCTCTGGTAGTGGGGGCGTACGGTATTTCAGAATTGCGGAAAT
CGACCCTTTTTTCTTCGGAATTTCCGAAATCGGGCAAAATTCCTTCGGTA
TTTCGGAATTTTGAAATTGTTTCGGTATCGGAAATCCATGAATTTTTGCA
AAATTTCGGTATTATAAATATACTAAAGTTTTTATCCTATCCCCCTTTTT
CGGAATTCATACATGAAAAATCAAATTTGATGAAAAAATAGTCAAAACGA
GGAAAAATACACCAAAAAATCGGTATCGGAATTGCAAACCCCGTACGCCC
CCCCCCCCTGGTACTTAGGATAAATAAAAAACATCTGAAAAACAGAGGTA
TTGTTTTTGAACTGTTTACCGAAAAAATCGGAATTTGCCATAGGAAATGA
AGGATTTTGATCATTGATGCTGATGCGATGGCGCGTGCACTGCTACGTTT
AATACTATACCGTATACGACGTTATTTTTCGCGCTACGGCTAAATTTCCC
GCCAAAAATGCCGTTCACTGATTCGTGTCTATTACACCGTGATTGGATAT
TTTTGCTGTCGACAAGTCGACAACAATTTCAATAACGGTGCACTTTTGTA
AAGCTCATTTTTTGGAGTTTTGTGTTTTTGAAGTTCAAGTTTTAGGAGTC
GTTCTGTTTACTTTATGGTTAAATCGTTGAAAGATTTCATGCAAAATGAA
TCGATTTGTTACAGAATCTGAAGTTGAGGAAGCCAAAAAGAAAAGAGCTG
AAGAGTGGGAAGCTGCTAGATCAGCTGGAAGAGAACTTCGTAAGTACTTT
AATAAGTTTTAATAATAGTCATCTGGCGGGCCTGCTGATGGATGGTGGTG
GGTGGGTCACGTGCGTAATTTCTTGGTTGGCAAACGATATCATACTCCAG
GATAGCCTGGGAATCCATGCTATGATTTCTTCTTTGATAAACTGATGGCG
AAATGTATAGCATGGTATGGGTTGAGAGTTCGAATTTCTCAGATCCTAAT
AACGGTTGAAAACTATAGCCAATCAAATTTTGTTATTCTTTTACTGGTCA
CACTTTCTTAGAGAAAGCGCAACTTTCAAAATTGGTTTTTATTTTAGTAA
GTGAGGACAGCGCTAAATTCGAATTTCTCACTGTAAAAAATGTGAGTCCA
ATATTGGACTCACAGCTCGAACCCGTCTTGTGTACATCAAATTATAAAAA
AACACACGACGGGTCTCCTGTCTAACTCCAGGATGCATCGACTTTTATTT
TCCCCCTATTTTCTACTTTCCTATCTTCTATCCTGATTTTCTATCTTTCT
CAAGTGTTTCTAACTGTTTTCTAAGTATTTTTCTGAAATTTGCCCGTACC
GGTGAAACAGGTCACCGACCCCGGCTCGAACCACCAAATGCAAGCAACCT
TGGTTTACAAACCCAACGCCTAACCGCTTACGTCAACGAGACACGGCAGA
AAATTGTCATTTACAAATACTTATAGCGTGTAATTTACAGACCTTGATTA
AGAAAGCTCCCAACCCTACCGGTGTCCCTACAAGGATCCCTACGGGATCC
AAAGTTAAGTCACAGGGTACGAATGCCCCTAAGAAGGCCTTCGGCCTTAT
ATTGTGACTCCAGTAAGTCATTCAGCAAGTTAGAAAATATAGTAAATAAC
TCACACAGAACCAGAAAGTCAGAAAAACTACGAACAAGAGACTGGAAAGT
ACGAAATAAGTCCAGATCTGTCTTTCGTCTTTACGAAGAAGCCACGACCG
ATAGGATCGATCATCGAAACAGCTCAATGACGGATGGATATGTGATCGAT
GGATTACTTAACGATCCGGATAGGAGATCAATAGACCTTTTTTCAAAGAG
GCCACCCTGTTGAATAATTATGTAGTCCAGCAGAAAAACAATGATAAAAC
CATGCATAATTATTACAATATGCANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCATAATTATTACAATATGCATGATACAGTAATTATGCATGGCTCTA
TCATTGTTTTTATGGCTGGAGTACATAATTATTCAACAGGACGTCCTTTT
TAAAAAAAGTTCTATATAGAGGATCGATACTCAAGATTTTTTAAAGCTTA
TGATTAGTTGTCGATAATAGACCTTTTCGCCTTTCTATCCGCCATCTTGA
TATTTGTATGCAAAAATAGAGGAACGAAAAAGCCGTGGTTGGATTTAGTT
GGAAAATATGCTAACATATGCAAGTCTACACAAAGATTAAAAAGACAAAA
AAGCATCTTATAAAGAAATATTATAATCATTAGAACAATAAAAGATATGG
AATTTTTTAATCCAAAAAGAAATATTCACAGAACAACAAAAGCCTTTTAG
AAATTTGTTCTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTCTTCTACAAGATTACACTTTAATATAATGCCAATTATGCA
TGTAAGTTTTACATTAATACTTTCTTTTTGCATATGTTTTGCATACTTTC
TAAGGTAATTCCACCACGGCAATTCAGCCACCATAATTTTTGCATACAAT
TCAATATGGCGGATGGAAAGGCGAAAAGGTCTATTTATCGATCTATCATC
GATCTTTTATTGATCAATGTATGATCGATACATGATCGATACATGATAGA
TGCATAATCGATTTATAATCGATGCATACTCGATTAACGATCAATGACGA
ATCGATATATATACTCGATTGAAATACTAGCTCAATAATGGATAAACGAA
GAATCGATACTCAAGACTTTTTAAATGGCTGAATCTTAACCATCGATCTC
CTATCTGGATCGTTAAGTAATCAATCGATCACATATCGATCCGTCATCAA
GCCGTTCTGATGATCGATCCTATCGAGCGCGGGGGTCTGGATCAAGATTA
TGGGATTTCGAGTTACGGGCAGATTTTACTTTCGTTTTGAGTGGTTTCAT
TTTCGATTTCAATCCGTTGCTAAAATAATTATGCATGACATTACTTCATG
ATTGGGAGATATTTGAACATTTACAATCCACAAATTTTTTTGTAAATCAG
GTTTACCTTTTGATTTAACTTAAAAATAGGGGCTGGCAGAAACATTTCCA
GGTTTTTTTTAAATTGCTCACAGCTTGGGAAAAACCCTGTGTTTCCATTT
CAAGAAATGACCAATTAAAAAATTGATATATTATTATTATTACATTTGTT
AAATAAAGTTATATTACTGCTCGTCATCCAAGGTGCCAAAAAGGCATTAG
TGCCAAAAATTAGGACCAGCAAAACCTTCATCATACGTAGCAATCTTTCA
TTGGTTTAAGTTTAAAAAAGAATGGAGCGTTTTTATTGCAGATTTTATTG
CAGATGTTTTTTTAACCTGATAACAGCTGGGACTTTTTTACCCAGATGGT
TAATTTTCAAGGGCCTTCAGACCAGCTGTTATCACAGGTTATCAGGTTAC
TAAAAATCTACTAAAAATTTCCCATTTTGTCTTATTACTCCATTCATCAT
CACAAGAATTTCTGTCCAATAAAAACGTGCTATCAGATTGATTGTTTGAT
TCATGTCACCTGGATTTTCTTTTTTTGTCCGGCAGATAGTCTTGTCTTTC
TCCATTCATCATCGCCATTTTTGATTATATATCTTTGAAGAAATTCATAA
AATTTCTGTCCCAACCATCTTCTATCAGGAGATTTGGTGGCAGAGCAGAT
ATATGTATTTCATCCTTATTGGGACTCATCAGCACTGCATACTCAGGCAT
ACTGCACCCTACATGAACAGATATATGTATAATAAATAAAAAGCTTTGAA
ATTGAATCATCAAATTGTTCTTTTAGCAAACCCAGAAGAGCCTGTAGACA
CGCGATCACTGTATGAAAAACTTCAAGAACAGAAAGATAAGAAACAAGAA
GTTTTTGAAGATCAACTGAAATTCAGTATGTTGCTATTGTTGTTGAGTGA
ATTTTTATCTGAATTTATAATATATAACTGGAAATAAATACCAAAGAAGT
AGATCGCATTTACGTGTGTATGAATGATTGAACACAGATTTTTCAAAAGA
AGTTGAGATTTTACATGGATTCTATGTTATTCCGAATTCAAAATTTGATT
TTACAGAAAACATGATTTACAAAGGATTGAATCATGAAGACGCAGAATTC
TTAGGAATGGTGTCCAAGAAACAAGCTGAACTTGACGATCAAAGATACAA
TGAACATTCAGAAGAAATGCAACAGTACAGAGTATGAATTGACTTTTATT
ATTTATCATGTCTAAAGAAGGACTTACAAAAAGTATGATTTTTCAATAAT
TTTGAATGATCGTACTTTATAAAGTTCTCATCTTTGGAAAACATTTTTGG
ACTCTAATGAGTAATGTTTATTTGAAAAAAAATATTTTCAAACTGTTGTG
TGATTATATGGGGTAGAGCTACTTTCTGCAACCAATATCAAAATGAGACA
CAAAGACTTTGTTTATGGTTGAATAATAAAAAGGGTGAACTTCCCGGGGT
GGGGTACTTAGGCACTAAAGTCTGTCTCTGTAGCAGATTTTATTGAGACA
GACCAGGGATCGAATTAGCGGATCGCATTTCGCAATAAAAATTGAAAATT
GATCCATTTTAGGATGCAAAATCATGCTTATCAAAAAATTGCGATGCACT
TTCTATCCCTTATTTCGATGCCTGCAGACTTAAGAGCCATTGTCTGAGAG
ATCCAGGTAAAGTGAGGAAGTGATGTCTTTAGATTTTCTCCTTTTTTTAG
CTCTGCATGCTTGACGACCAAGTACCCCCCCTTGGGTAAACATGCAGAAC
AGAGAAAACATTTCCGATGTTTTCATATTTGTTAACTCTGTTTTAATTTA
TCAAACTTTCTAGTCAGCAGTGGACGAAGTAGCTTCAGGTCACTTAAAAA
AGAAAGAAGAAAATCAAATGACCAACAAACCCGCCATTGCAGACGATTTC
AAAACCAAGAAAAACAAAAGTCAAGCTGCTCTTCTCATGGGTGGCATCAT
TAAGAAAAGGTAAATTTTAAACTTTGATTACAAGTGTTCACCCCCGTCTC
ACAACCCCAGTGAAACTTTTTTCCTCATTGGGGATAAAAACTCCTATTGA
AATCCCAATGGTGATACTGATAGAAATTCTATTGTTCCAAGGTTACAAAA
TCCGGTGGGGATGGTTTTGGAGTGTAATCTTTTAAACATTGAATTTCTAA
TGGGGGTGAAATCAAAGTCAATTTCCTAGCGGGGCTGAAATTTCAGGGTG
TTTATTTTTATGTTTTTGCCAAGTAATTTCCCAGTGGGGCTTGAGTCCCA
GCGGGTCTGTGACACAGGTGTATATGTTCATGTGTCTATATATTACGCTC
AGAACTTTGTTTCTATGATATGAGCACTTTTAAGATTCTGTTGAGTAGCA
AGCTCTACTTCTCCGCTCACCACAAGCGATTATATATCGGGTAGCTACAA
CGTTTTTTTCATTTCCAGAAAAACAGATGATGACGTCATCACAACTCCAC
CAAAGAAATCGAGGGAAGAAGAAAAGAAAAACACTACCACAGAAGGTAAT
TACACTTTAAGTCTCTAATGAATAACTGTTATCGAAAATTATCATATTTC
ATTCAGATGTACTAGTTGACCTACGAAAGAGTTCAAGAATTTCTCGACGC
CTTGAGTCAAAACAAAATGTCCAAAAGTGCTTTAAGTTTTGATATTTTAA
AAAGTACTAGATATCTAAAGTTAAAGTTTGAGTTTTTACTTTTTAAATTT
AAACCACTTAGTTTTAAACTCACGAGCTTTAAAAGTCAAAATTCACTTTT
CCTAAAATGTAAGAAACACGTAGAAAATGTGTATTAAATTAGGCGTATAG
TTTTAGACGTTTTCAATATGAAGTATTTGAGAAAAATTAAAGCCAGAGTA
TCTACTTTCCAATTATTAAAACTCAAAACACTTTGAAACATTATGTTGAC
CACGAGACGTCGAGAAAAGTCCGAAATATTTCGTGGGTCACCCGGTATTT
TCTTGTCAGTATAAATATACATAATAATGATTTCAGATGATTTTGAATGT
AAAAAAAAGAACAAAAGTTTTTATATATGATCACCTCATGCTGCTACCAA
CATTTTTGGACCTACCTCGGACACAATGATGCAAAATAGACAATACCCAA
TATGTGGACCATTAATTTTATGCATTTATGCAAACGTTATTTTTAAAGAA
ATTAAAAACGGCATTTATAATTGAAAAATGCCTTTACACAGCTTTACATT
AACATTTTTTTTTCATGCATTCGAGAAACAAAATGAAAACAAAATACAAA
AAACGAAAGGGCTAGAAGAATGGGATCATCTAATCACCAGCTTGGTTTCA
TCCCTTTATTATTTTTTTGTTTTTTTTAGAAGAAGAGACAAAATCGAGTG
GGAATTCGTTATCCATTTTGGCTGGTTATTCTTCGAGTTCATCCGATGGT
GAAAGTGAAAATGATTGAGGGAATTTGTGCTGGTGGAGGTAGTCGAGAAG
AATTGTTGACTTTCGACGCAAATATTGAATTGGGGATAATAATTTCAAAG
ATATTACAAATTGATGGAACTTATCTAATCTTCGTCCACCAACTTTACAC
GCCACTTTCTATTGTCTAAGTGACATGTTCGCTCCGGAACAAAATAAAGC
CATCTATTGGTTAGAAATGACTTAAAACTTGAATTTATCCTAAAGAATAG
CTTCATTTCGTTTCGGAGTGAAACGGAACCGTTGCGTTTGAACGTGGTCT
AAGAGACATGTTGTATTGCAGATTCTAATGAAAAATTGTTCTTGCATGTA
CATAAGGAATTGACATCGGAATATCTGAAATTTTCACGGTATATTATGGT
ATTTATGGTATTGTTCTCTTCGGAATGAAAAACGAACACCGTTGAATTAT
GATCGGATCATATAAATGGCTGGTCATTTCTGGAATTCACAATCTTCCTT
TTCATTCTGCGATTTTTGTCAATACGATTGCAAAGAAATTCCGTTGTTTC
AAAAAAGCGGAGAGATGTTCAATTTGCCATTGAAAGCTCAGATACGAAAA
TATACGATGCAGATACAATGATGATGAACAATTCATAATATTATGAATAA
AATCACGTACCGAACGGAAAGGTTTAGTTTACACTTGAAATGGATATTTT
ATTCAGAGATATAAAAGAAATTTTTTGATTTTCAAATTTTACCAAAAGAT
TATATCAAGACATTTTAACTGTTCTATCCTGACTACTTCATTTAAAAGGG
CATAAACCGAATGCTTTTAGAAAGAGTATGAAAATAGCTTTTCAATGGTA
CCAATGTTTTGTATTTTCGCCGAGAAGATAATCAGGAGTGGAATATTGTG
AAGTTATAAATGAATTCAAAAATAAAACTGAAAAAATGAAAAAGTATGGT
ATGGTTGCCATCATCTCAAGAGAAATATTATCACTGTGAAAAACTTTTTG
AATTAACTTATTTAATAGATATCTTTCCCGATAAAGCAGATTAAGCATAC
CTTAAAGGAAGAAATTTTGGCGGGAATTTAATTTGGCGGATGGCCGAAAA
AGTTTTTTCAGATGGAATTTAATTTGGCGGTTAACTTGAAAAATTATATT
TGGCGGGAATTTAATTTGGCGGATGACCGAAAAAGTTTTTTCAGATGGAA
TTTAATTTGGCGGTTAACTTGAAAAATTATATTTGGCGGGAATTTAATTT
GGCGGATGAAGGACATTTTTGTCCAAAAAACGCCATTAAAAAAGGAAAAA
CCTGTTTTAAAGCCTGAAATAGCACACATTTGGGGGAATAAATAGAACAA
TTTAAATTTGGCGGGAATTTAATTTGGCGGATGACGGAATAAATTAAATT
TGGCGGGAACTAAATTGGGCGGATTTCGACAAAATCCGCCAAATCCGCCA
AATTAAGTTCCCGCCAAAATTTCTTCCTTTAAAGGTAGGTGGTTTTGGAC
CACGTCGAACTTATCAGAGAAAGAGATTTATAATTTTAACTTAATTGTCT
TTTAACGAGCGTTGTTCTCCTTCGCATGTTTCCAACGTACTTGCTCTATC
GTCTATAACCATCTTAGAAATATTTAGTCAATTCTAAAAACCCGTTGACA
CTTTGGTAGGGG

Coding sequence (CDS) from alignment at sc0000063:592579..601190-

>TCONS_00006169 ID=TCONS_00006169|Name=TCONS_00006169|organism=Clytia hemisphaerica|type=CDS|length=4578bp|location=Sequence derived from alignment at sc0000063:592579..601190- (Clytia hemisphaerica)
AAGAGACAAAATCGAGTGGGAATTCGTTATCCATTTTGGCTGGTTATTCT
TCGAGTTCATCCGATGGTGAAAGTGAAAATGATTGAAAAAACAGATGATG
ACGTCATCACAACTCCACCAAAGAAATCGAGGGAAGAAGAAAAGAAAAAC
ACTACCACAGAAGTCAGCAGTGGACGAAGTAGCTTCAGGTCACTTAAAAA
AGAAAGAAGAAAATCAAATGACCAACAAACCCGCCATTGCAGACGATTTC
AAAACCAAGAAAAACAAAAGTCAAGCTGCTCTTCTCATGGGTGGCATCAT
TAAGAAAAGAAAACATGATTTACAAAGGATTGAATCATGAAGACGCAGAA
TTCTTAGGAATGGTGTCCAAGAAACAAGCTGAACTTGACGATCAAAGATA
CAATGAACATTCAGAAGAAATGCAACAGTACAGACAAACCCAGAAGAGCC
TGTAGACACGCGATCACTGTATGAAAAACTTCAAGAACAGAAAGATAAGA
AACAAGAAGTTTTTGAAGATCAACTGAAATTCAAATCTGAAGTTGAGGAA
GCCAAAAAGAAAAGAGCTGAAGAGTGGGAAGCTGCTAGATCAGCTGGAAG
AGAACTTCATTTGTAGTCGTAGTTCCTCACCAATACATACATACAGTAAA
TACCAAGAGACAAAATCGAGTGGGAATTCGTTATCCATTTTGGCTGGTTA
TTCTTCGAGTTCATCCGATGGTGAAAGTGAAAATGATTGAAAAAACAGAT
GATGACGTCATCACAACTCCACCAAAGAAATCGAGGGAAGAAGAAAAGAA
AAACACTACCACAGAAGTCAGCAGTGGACGAAGTAGCTTCAGGTCACTTA
AAAAAGAAAGAAGAAAATCAAATGACCAACAAACCCGCCATTGCAGACGA
TTTCAAAACCAAGAAAAACAAAAGTCAAGCTGCTCTTCTCATGGGTGGCA
TCATTAAGAAAAGAAAACATGATTTACAAAGGATTGAATCATGAAGACGC
AGAATTCTTAGGAATGGTGTCCAAGAAACAAGCTGAACTTGACGATCAAA
GATACAATGAACATTCAGAAGAAATGCAACAGTACAGACAAACCCAGAAG
AGCCTGTAGACACGCGATCACTGTATGAAAAACTTCAAGAACAGAAAGAT
AAGAAACAAGAAGTTTTTGAAGATCAACTGAAATTCAAATCTGAAGTTGA
GGAAGCCAAAAAGAAAAGAGCTGAAGAGTGGGAAGCTGCTAGATCAGCTG
GAAGAGAACTTCATTTGTAGTCGTAGTTCCTCACCAATACATACATACAG
TAAATACCAAGAGACAAAATCGAGTGGGAATTCGTTATCCATTTTGGCTG
GTTATTCTTCGAGTTCATCCGATGGTGAAAGTGAAAATGATTGAAAAAAC
AGATGATGACGTCATCACAACTCCACCAAAGAAATCGAGGGAAGAAGAAA
AGAAAAACACTACCACAGAAGTCAGCAGTGGACGAAGTAGCTTCAGGTCA
CTTAAAAAAGAAAGAAGAAAATCAAATGACCAACAAACCCGCCATTGCAG
ACGATTTCAAAACCAAGAAAAACAAAAGTCAAGCTGCTCTTCTCATGGGT
GGCATCATTAAGAAAAGAAAACATGATTTACAAAGGATTGAATCATGAAG
ACGCAGAATTCTTAGGAATGGTGTCCAAGAAACAAGCTGAACTTGACGAT
CAAAGATACAATGAACATTCAGAAGAAATGCAACAGTACAGACAAACCCA
GAAGAGCCTGTAGACACGCGATCACTGTATGAAAAACTTCAAGAACAGAA
AGATAAGAAACAAGAAGTTTTTGAAGATCAACTGAAATTCAAATCTGAAG
TTGAGGAAGCCAAAAAGAAAAGAGCTGAAGAGTGGGAAGCTGCTAGATCA
GCTGGAAGAGAACTTCATTTGTAGTCGTAGTTCCTCACCAATACATACAT
ACAGTAAATACCAAGAGACAAAATCGAGTGGGAATTCGTTATCCATTTTG
GCTGGTTATTCTTCGAGTTCATCCGATGGTGAAAGTGAAAATGATTGAAA
AAACAGATGATGACGTCATCACAACTCCACCAAAGAAATCGAGGGAAGAA
GAAAAGAAAAACACTACCACAGAAGTCAGCAGTGGACGAAGTAGCTTCAG
GTCACTTAAAAAAGAAAGAAGAAAATCAAATGACCAACAAACCCGCCATT
GCAGACGATTTCAAAACCAAGAAAAACAAAAGTCAAGCTGCTCTTCTCAT
GGGTGGCATCATTAAGAAAAGAAAACATGATTTACAAAGGATTGAATCAT
GAAGACGCAGAATTCTTAGGAATGGTGTCCAAGAAACAAGCTGAACTTGA
CGATCAAAGATACAATGAACATTCAGAAGAAATGCAACAGTACAGACAAA
CCCAGAAGAGCCTGTAGACACGCGATCACTGTATGAAAAACTTCAAGAAC
AGAAAGATAAGAAACAAGAAGTTTTTGAAGATCAACTGAAATTCAAATCT
GAAGTTGAGGAAGCCAAAAAGAAAAGAGCTGAAGAGTGGGAAGCTGCTAG
ATCAGCTGGAAGAGAACTTCATTTGTAGTCGTAGTTCCTCACCAATACAT
ACATACAGTAAATACCAAGAGACAAAATCGAGTGGGAATTCGTTATCCAT
TTTGGCTGGTTATTCTTCGAGTTCATCCGATGGTGAAAGTGAAAATGATT
GAAAAAACAGATGATGACGTCATCACAACTCCACCAAAGAAATCGAGGGA
AGAAGAAAAGAAAAACACTACCACAGAAGTCAGCAGTGGACGAAGTAGCT
TCAGGTCACTTAAAAAAGAAAGAAGAAAATCAAATGACCAACAAACCCGC
CATTGCAGACGATTTCAAAACCAAGAAAAACAAAAGTCAAGCTGCTCTTC
TCATGGGTGGCATCATTAAGAAAAGAAAACATGATTTACAAAGGATTGAA
TCATGAAGACGCAGAATTCTTAGGAATGGTGTCCAAGAAACAAGCTGAAC
TTGACGATCAAAGATACAATGAACATTCAGAAGAAATGCAACAGTACAGA
CAAACCCAGAAGAGCCTGTAGACACGCGATCACTGTATGAAAAACTTCAA
GAACAGAAAGATAAGAAACAAGAAGTTTTTGAAGATCAACTGAAATTCAA
ATCTGAAGTTGAGGAAGCCAAAAAGAAAAGAGCTGAAGAGTGGGAAGCTG
CTAGATCAGCTGGAAGAGAACTTCATTTGTAGTCGTAGTTCCTCACCAAT
ACATACATACAGTAAATACCAAGAGACAAAATCGAGTGGGAATTCGTTAT
CCATTTTGGCTGGTTATTCTTCGAGTTCATCCGATGGTGAAAGTGAAAAT
GATTGAAAAAACAGATGATGACGTCATCACAACTCCACCAAAGAAATCGA
GGGAAGAAGAAAAGAAAAACACTACCACAGAAGTCAGCAGTGGACGAAGT
AGCTTCAGGTCACTTAAAAAAGAAAGAAGAAAATCAAATGACCAACAAAC
CCGCCATTGCAGACGATTTCAAAACCAAGAAAAACAAAAGTCAAGCTGCT
CTTCTCATGGGTGGCATCATTAAGAAAAGAAAACATGATTTACAAAGGAT
TGAATCATGAAGACGCAGAATTCTTAGGAATGGTGTCCAAGAAACAAGCT
GAACTTGACGATCAAAGATACAATGAACATTCAGAAGAAATGCAACAGTA
CAGACAAACCCAGAAGAGCCTGTAGACACGCGATCACTGTATGAAAAACT
TCAAGAACAGAAAGATAAGAAACAAGAAGTTTTTGAAGATCAACTGAAAT
TCAAATCTGAAGTTGAGGAAGCCAAAAAGAAAAGAGCTGAAGAGTGGGAA
GCTGCTAGATCAGCTGGAAGAGAACTTCATTTGTAGTCGTAGTTCCTCAC
CAATACATACATACAGTAAATACCAAGAGACAAAATCGAGTGGGAATTCG
TTATCCATTTTGGCTGGTTATTCTTCGAGTTCATCCGATGGTGAAAGTGA
AAATGATTGAAAAAACAGATGATGACGTCATCACAACTCCACCAAAGAAA
TCGAGGGAAGAAGAAAAGAAAAACACTACCACAGAAGTCAGCAGTGGACG
AAGTAGCTTCAGGTCACTTAAAAAAGAAAGAAGAAAATCAAATGACCAAC
AAACCCGCCATTGCAGACGATTTCAAAACCAAGAAAAACAAAAGTCAAGC
TGCTCTTCTCATGGGTGGCATCATTAAGAAAAGAAAACATGATTTACAAA
GGATTGAATCATGAAGACGCAGAATTCTTAGGAATGGTGTCCAAGAAACA
AGCTGAACTTGACGATCAAAGATACAATGAACATTCAGAAGAAATGCAAC
AGTACAGACAAACCCAGAAGAGCCTGTAGACACGCGATCACTGTATGAAA
AACTTCAAGAACAGAAAGATAAGAAACAAGAAGTTTTTGAAGATCAACTG
AAATTCAAATCTGAAGTTGAGGAAGCCAAAAAGAAAAGAGCTGAAGAGTG
GGAAGCTGCTAGATCAGCTGGAAGAGAACTTCATTTGTAGTCGTAGTTCC
TCACCAATACATACATACAGTAAATACC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003516	XLOC_003516	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00006169-protein	TCONS_00006169-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000063	supercontig	sc0000063:592579..601190 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0328933	0	1.48981	1.00224	0	0.263193	0.428035	0	0.13073	0.319642	0	0.199857	0.100642	0.228815	0.416628	0.582256	0.284315	0.374721	0	0	0	0	0	2.84465e-06	0.78811	0.510343	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR019331	FAM192A/Fyv6_N

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00006169 vs. Swiss-Prot (Human)

BLAST of TCONS_00006169 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00006169 (transcript) - C. hemisphaerica