Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006148 ID=TCONS_00006148|Name=TCONS_00006148|organism=Clytia hemisphaerica|type=transcript|length=3186bpRun BLAST on NCBI transcript from alignment at sc0000063:183126..198769- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00006148 ID=TCONS_00006148|Name=TCONS_00006148|organism=Clytia hemisphaerica|type=transcript|length=15644bp|location=Sequence derived from alignment at sc0000063:183126..198769- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00006148 vs. Swiss-Prot (Human)
Match: ANPRA (Atrial natriuretic peptide receptor 1 OS=Homo sapiens GN=NPR1 PE=1 SV=1) HSP 1 Score: 400.979 bits (1029), Expect = 4.309e-121 Identity = 207/361 (57.34%), Postives = 252/361 (69.81%), Query Frame = 3 Query: 57 YDALLWTAPEHLDNMKE--ERSKEGDVYSYGIILQEIITRGSPYSMYE-NLSAKEILDRVKKCSNPRFRPVVPEDYGHPEYHDLMSQCWEEAPTSRPRFDEIMKALKKLNGGKNINIVDNMIKMMEKYTDHLEELVAERTKQLEDEKAKTDELLYRMLPRTVAEQLKHGEAVSAETFDMVTIFFSDIVGFTKLAAESTPMQVVDLLNDLYTCFDQIVDQHHVYKVETIGDAYMVVSGLPERNGNRHAGEIARMSLDLLSATTTFVVRHKKEYRIQLRIGIHSGSCVAGVVGLKMPRYCLFGDTVNYASRMESSGLALRIHVSPECHEVLTELGGYHLIERGPVSMKGKGTIVTYFLAGYDG 1130 Y LWTAPE L S+ GDVYS+GIILQEI R + + +LS KEI++RV + P FRP + E LM +CW E P RP F +I L+K N + NI+DN++ ME+Y ++LEELV ERT+ +EK K + LLY++LP +VAEQLK GE V AE FD VTI+FSDIVGFT L+AESTPMQVV LLNDLYTCFD ++D VYKVETIGDAYMVVSGLP RNG HA E+ARM+L LL A +F +RH+ + +++LRIGIH+G AGVVGLKMPRYCLFGDTVN ASRMES+G AL+IH+S E VL E GG+ L RG V MKGKG + TY+L G G Sbjct: 696 YAKKLWTAPELLRMASPPVRGSQAGDVYSFGIILQEIALRSGVFHVEGLDLSPKEIIERVTRGEQPPFRPSLALQSHLEELGLLMQRCWAEDPQERPPFQQIRLTLRKFNRENSSNILDNLLSRMEQYANNLEELVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLYTCFDAVIDNFDVYKVETIGDAYMVVSGLPVRNGRLHACEVARMALALLDAVRSFRIRHRPQEQLRLRIGIHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGEALKIHLSSETKAVLEEFGGFELELRGDVEMKGKGKVRTYWLLGERG 1056 The following BLAST results are available for this feature:
BLAST of TCONS_00006148 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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