TCONS_00061887 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00061887
Unique Name	TCONS_00061887
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1841

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_361:503442..514335+

transcript sequence

>TCONS_00061887 ID=TCONS_00061887|Name=TCONS_00061887|organism=Clytia hemisphaerica|type=transcript|length=1841bp
ATCAAAGGTGATCTCAGTATGGGTCGCAACTTACAGAcactgaaagaaga
aaaaatcggaGGAAATTTGATTGCCACACAGTACAGTAATGACGATAGCT
TGCGCTATTCCTGTGCGAATGGGACGTGACAGATGAAACACTACGAGAAC
GCCTCGATCAACTAGTCGCTAAAAACGAGATCGAAAGAGCCGCTGCTGTT
GCTCTTTTTCATAACAAACTAGACTGGACCATCGATATATTGGGAAGTAC
ACAGGCTAACCAAAAGAAAGAACTACCTATCGTAGCGATGGCGCTATCAG
GTTACAACGACAGCATCAAGAAAGGCTCAATGTGGATCGCTAATTGCCAA
CGTCTCGGCCAACAGCTAACGAATCCATATTTACGAGCAATGTTTGCGTT
CTTAACGGCCGAGGGAGAAGATTTTACAAGTGTTCTGAAGGAGAATGGGA
TGGATTTGAAAGATCGCATTGCCTTCGCATGTAGATATCTCTCAGATGCC
AAGCTCACAAATTACGTTGAAAATGTGACATCAAAAATGATCACGAGTGG
TGGTCTTGAAGGATTACTTTTAACAGGCTTGACAACCGACGGTATTGACT
TACTCGAAAACTATATCACCAAGTATGGCGACGTCCAAACAGCAGTTCTC
ATCGTTTTGGTAATGAAATACAGTGACGTCATGAAAGATGAACGTGTCAA
CGATTGGATAGAATAtTACCGCTGTCTTCTCGATCGCTGGAGGATGTGGC
ATAAACGagCACAGTTTGATTCACTGGTTCAATCAATGAGTTTACAACGT
AAAATCCCCAATCAAATAAGTGTCACTTGTACATATTGTAGTAAGCCCGT
CTCCCTTAATATGATGGCTGCAGGAGGGCTGAGATCAACACGTTTTCTTT
ACGGCGGTGCAGGCGGTGCTAATCGACAAAATAAGgcaatGTCATGCCCT
GGATGTCGACAACCTTTACCTCGATGCTCAGTTTGTTTAATCAATATGGG
ATCTCTTTCCACACATCAACCTCGAACAGGCAATCAGAAACCGAAACTGG
AGAATAATGTCAATTCGTTTCAAAATTGGTTTACATGGTGTCAAATGTGC
CGCCATGGAGGACATGCCGCTCATCTCGCTGATTGGTTCGTtGATCACGT
GGAATGTCCGGTAACAAGTTGTAATTGCGTGTGTAACGCCTTGGATCGTG
TGTCCATGGTCACTCCACAAGAATTACcagtaaagaaaatttctatgTGA
TGATGTAAGGACTCGTGTGATGGTgggcaagaaaaagtgaggcCACTTCC
ATGAATTGACGTAAGGACCTACTTGTCGTTGTTCAAAATGATTATTCATC
CTTTGGATTTTTTTTGGTGCGAATCCACTGAATCCTGGGATCGAATGCAA
TGACCTTCTTTCATTCGAAGGGAATCTTTAAAATGAATAGAATTCTTAAA
TCTCTACTAAACACTTGCGCAGTGCAAGTGGCTCCAGTGGCTCCATTTCG
GTCAGTTTCTTTCAGCTTTATATAGACCCTGGAGGCAGTTTCTCAAACCC
GgacaagcaaaatattttgattggagtttttttttaaagtggtacCCGCA
TCGAAAGCGCTAGATCTAAGTGATATTGCGCCGTTTGTCGCCATGCAAAG
ATTTAACACTACAATGGTCCCGAGTTTATGAAGGTCAGTTTTAGCATATT
CTATGCTTTTGtaggaaaaataataatattcgCTGCTAGAATAAGATGAA
CATATTCACACCGATCTGGATTCATATCGAGGTGAATTTGTAAacagtca
atttttttcaagagtATGGATTATTCATACTTTTGCTTAAa

Run BLAST on NCBI

transcript from alignment at scaffold_361:503442..514335+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00061887 ID=TCONS_00061887|Name=TCONS_00061887|organism=Clytia hemisphaerica|type=transcript|length=10894bp|location=Sequence derived from alignment at scaffold_361:503442..514335+ (Clytia hemisphaerica)
ATCAAAGGTGATCTCAGTATGGGTAAGAATAATCTTTGGCTTAAAAACCA
TAATGCAttactttcaataatttttgcATGATGCTAGTTCCATTTCATAT
TTGTCGGCTTTGTTAATTTTTCTGAGTAACCTGAATACTTTAACTAGGGA
AATGCTctattttatatatttcaaaCCAAACAAAATTCCCAAATCTTTAC
TTAACACACAAACATGCATACACACcttcttttcttcaaagaaatgcgaa
ggcaCAAAGCACCACAAACTCCCACTTCGCGGGAAATGGCTCCCAGCTTT
CcgcaacaaaatcaaaatagtaAAGAAGGTACCAATAAATACACACACAT
AATAAACCGTACAGCtaaattcatatttttaatCAGGATGAAAGTTCTCa
taatgttttttgtttcattggagCATGCGCAGTAATAGTGAGAGTTCGCT
GTGTTGAATTTCTCCTTCTGAGGTATCTGGTCATATTACCTAAAAGGTTA
AAAGTTGTTCCTTCTCAGTGAAGTATATAAAGATtcttttccgtctcaaa
atcTGCATAACAGACCAAGAATATGCGCTACTTTTCccgtctcagacgaa
aaacTTTGCGTTGAACTCTGATACCGCTTGCGTTAAATGGGACGATATTT
TTATAGGTCGCAACTTACAGAcactgaaagaagaaaaaatcggaGGAAAT
TTGATTGCCACACAGTACAGTAATGACGATAGGTTAGTTTCATTTTCCTA
ATCATAAACAAATCATCAAATCATCATTAACTTTTAATATCGATTTAGTT
CCGTctacgaaaaaacttttttagatttttgggatAGTTTTAGAaacatt
attaaatatttcaacattttccaGAAAGCTTGCGCTATTCCTGTGCGAAT
GGGACGTGACAGATGAAACACTACGAGAACGCCTCGATCAACTAGTCGCT
AAAAACGAGATCGAAAGAGCCGCTGCTGTTGCTCTTTTTCATAACAAACT
AGACTGGACCATCGATATATTGGGAAGTACACAGGCTAACCAAAAGAAAG
GTAGTAGCCCCATAAATTGTTTGCCAGATGAAGTCTGAatgcaaatatat
tttttaaatgttcgtAGAAAAGCCGTTTCTAATTTTTCTCTTTAGCTAAA
GTctatactttaaaaaataaagtgaagTGGTTTTACCATCTGCTTCGgtt
gatttctttttcttgaggagaaaaattctaaaaaccaaTTTGTTTTAAAT
TAATCACTCTATAAGACTATTTGTTATAAGACTATTTGTTGAATACTTCA
CTAACTGGTCATTTGAAGTATTAGAGCTGACgcgataaaaaaaaaaaaaa
attgtttaaatcaaataagagcttgtaaaactccagcttgtccctgtTCA
ATAGCATTTTCTATTTAGAATTTTGaacgaaaatctttttcttacCTTAA
CCATTCAGAACTACCTATCGTAGCGATGGCGCTATCAGGTTACAACGACA
GCATCAAGAAAGGCTCAATGTGGATCGCTAATTGCCAACGTCTCGGCCAA
CAGGTTAGTAAAGTCGAGaaggttttaaattttgatagaattcaaatgaa
atagtttttttgttctcgttgaaaagatattcaagagtggaatataaaca
aatagaaaaatctcaaagaaatttagaaaatgacgATGAAATTAAAGAAG
AAAGCTTTTTTTATGATCTAACACCCTCTTTGTTTAAAGGGCCCGGGGAA
ACGATTTGCACTTAATTATTTCACAACTTTTACATTAGTTTATAAGGATT
TCACCGTACTGATTCATTTCACCATAGCTAACGAATCCATATCATTTCAC
CATAGCTAACGAATCCATATTTACGAGCAATGTTTGCGTTCTTAACGGCC
GAGGGAGAAGATTTTACAAGTGTTCTGGTAAGTTTCTTTCAATGTCTAAA
CTTTCTGTTTCAAGAAAGGATCTAAACTTTCTGTTTCAAGAAATGATCTA
ACTATGATCTCCTGGTAGTTTAGATTAGTAATTGTCCATCTTAATCGCCA
ATGATTACTTGCCCGAAAAAAAACTTCGACCGAAGTCTCAGGACTGATAT
TAAACTAAGCTTTAAAAGAAACTTTGCTGGGtgtaaattttcaatcattg
ttTATTAGAAGGTTTTGGCACAACCATCTTAGAATTTTGCCGCTTAAAAA
ATACAGTAATATTTGATTTTCCCTTTAATAATCCCTCTCAGttttaaata
tgaaaataatatgTTTTGAACTATGTTTGAAATCAATAAAACAAAACCTG
AAGCTTAATTTTCATCATAATTTGTCGAATTCCTTGGTCAACCCTTGAAA
CAGGTCtctatcatcacattcggttgTATTTACTATCTGCTCCATGAAAT
GGTGTATAAATTTGCTTTCTACTGTCAACTGTTTTGGTAGTTGCATCACT
CTTGTTCTACATGTCTTGCAATTGATGTCAAAATTCTGTCCGATAAGTTT
ATCTTTGTGATTCTCTTCCAACGGACACCGGCTAAATACAGTTTCCTCCA
GTCCTTGTTCTCTTAAAATTCGACAAAAGCCTTCGTTTGCTGTCTCATAA
AGATACTTGCTGAACGAGTTCATGATAGTTTTTTGATTGTTCGTTTCTGA
TTCAAGATTTCTCAGTCTAGTCGTTAGAATCTTGTTTTTCAAATCATCCC
AAAGTTCTTGGTAGCCTGTGTCTTTTTCCATTACACCTATTGGCACAGAA
GCTATTTCTTTGATACAAGCTTCAACTGTTTTTGTCAGGTTAAATCGATA
CACTGTTGCTAAATATTTGGTCGATTTGATGCCCATTTTATCAGCTTTGT
TGAGGTACTGAACACATTGGTGTTTGAGTTCTTCGATTTGATATTCATCA
GCTAACTCCAATAGAAATTGGAAGTTTTCATCTGAAAAATAgaatataaa
atttgaattacagTCATCAGTTGCTTCTCTGGACAAGACCTTTAAGTCTT
AGTAGGTAGTGGTAGGGAATTCTGAATCGTTTACGGCGTAATGAAGCTGC
ACTCCTTTTTGTTACCGTTATTATTAGCTTGTTTTAATTAGAGGTCCTTA
AGTTTGGATCTGTAAAATGGGGATATTGATCATTTATTTAATCCTTAAAT
CTTTACTTTTAGAGGGTAGGAAAAATAAAACGATATATCAAGGTTTTCTT
TTACATAGTCCATGCCAGGACCTCAAATCAGGGGTTCGCGGTTCGAaccc
ccgctccttccaatgttccgttcagttcctAGATAGTTAAGCCGGTTAGC
CGTGAACCTTGCAGAAACACTAGAAAGACTTCTAAATGTCATACATTTCG
CGGTTTTCTATGTataatatcgactctatctatccaGTGTAATGCTTTGA
TAATGTGCAGGGTTTCCCAAAAAGAGCAGACACATTTTTATGTAAAGTGA
AATACTCATAGTTTATGCGAGATCATGACTTGTATACTCGATATCTGAAA
AATATCTTCAATTATCTTGCGAATCCAATATTCTATTGGTTGAACAGGGA
ATTTCAATCTTTACTTATTatagttttgaggattttactttgtaGAAAAT
TATGTCCGCTTTTTTTGGGGCACACTGTAAGTTTGGTTACCTGTTATTTG
TTTGGTTCGATCGTACATCACTTCCAACATTCCTCTAACTtcattcttct
tcttcatcttcaactCGATTCTCTCTGATGTCTTCTCCATAAAATGTGAA
TGGAACATTCGATCGAACACTTGTGACCATAACGATAACATACAACGGTG
CACGTGAAATTCCTCACCCTCCACAATTAAAATTTGATCAGTATTCTTCC
ACGGTGTGCTGAAATCCATCCTAATATTTCGTTCCGTTACAActctgaat
taaaaaaaatcaagcacATGAATTGCAGTTTTGAAGAACATGGGAAACCT
AACGTGTTTTCGTCAAAGCTTTTACTACTGACAGAgagtctttttatttt
ttccttttctacttTAAACCTGACCTTGTGTCTTGCTTGGAAAATCTTCG
CTTAtcgattttaaattattttccttcTAAATTCCAACGAAATTTTTCCT
CCTTTGAAAAATTGTGATATTACTTTTATTCATTAACAATTAAAAATAAT
CTGTTGTTTgtggaaataatttttcgctTGTTCCCTATTTTTCTTTGATG
AAATGATAATCAATATTTTCCGTCTTTTCTCCCATAACAAGTCTCTTTCC
TTCATTTATTCTTCACTTgatactggagccttacttcaCAAGTACTCGAG
GTCTCGAGAGATATGGAACATATTGGGAGGTTTTTGTCGGTTTGAGtaac
tttttattgaaaattatatcaaaaaaggccttcacttttcttcttttccg
AAAGTTCCGAAATAAATTGCCCTCTCTGGTTTACTaattattttattcaa
aagCTACAACCCCAACCGGTCAATTATAGCCTTTTATGGACATCCTTGTA
ACTGGATTAAGATTAGAAAAACTTACTTAGTTTAAATTCCATCTTTTCGA
GCTTAACGCTCCACTTACCGATTACTatgttaaagggataatcagatggg
ttgagatattttgcctatagatagcttctaggattttaggaaaaatttct
aaatttttctgtgtacttattttcctaactcaagttataccactttgaaa
ttttgaacctttgcttgaaaacaatagaaaaaagtgtgaaaagtccctga
aaagtcccatttttcgagatttcaaattggtataacttgagttaagaaaa
taaatacaccgaaaaatttagaggtttttcctaaaatcttagaagctatc
tgcaggcaaaatatctcagaccatctgattatccctttaagatATCGTCT
TTGAAGGTGCGAAGTAGAAACTACTCTTTCAACATCTATTCTTTCTTTCG
CCATCATCTTTTTAAATGTGAATCTCTCTGAACATCgaaatcaaacattt
tgaacttttttgaaCGCTATATCGGGCAGGTGTCTTCCAAACATCTTAAA
CATAAATAAAACTCCTTGCTGCATAAATTATTTATCTATGCATAAATTAA
TTCGTAAAAACTTTGGAATGTTAAGAGGAAACGTATGTTACAGACTTGGC
TCtctttcaaagattttatgGCATAAATTATTCAAAAGGCTTGAATGAAT
TAAAATCTTGGACATCCAGCTAAAAGCTAAAAACGAAGAAACAGTGCCAA
Tccttgtacacgttttttataagaacaaactatgtaaaaacataaagctt
cgatggccaaaatattaagaacaagttaagaatattttaaggctttgcgg
aacCTAAAACatctattttcttaggaaaataaaccaaaaattcacaaaat
ggtaaaaataagaacatgttttaagagcatttttaggcttagaacTCAAA
AAGCTAACTTTAAACATTCGTTGTTTTTTAAAACTCTATCTGAAAAGTTC
TGCCAGATTGAGTGGCGTCTCTTGATTAGTTACATCTTGATCATTTCGGA
AAAAAACGTTAAGGAACGAACGAAAGAATACCCATGAAACTacagtaaga
acattttaagaacaccATCACTCGCACCAGAAAAGTTGCAAATTGAATCA
GTGACCTGGGCGAGTTTTAAATCTGTTTGATGGAGACCTTATTTACCCAT
AACATGTTCATTGAATTTATTTCTTCAACGTTTTTAAGTGTATTATGTAT
TCAGTTCTTCTATTATTTGCCCAAAAAATGTTTATCCTACGTCAAACTTT
CATAAGATATCACTCATCATGGGAAATTGGGAAATTACAATTATCTTGTT
CGTAAAAAAGTCACTttcagtttcatgttttttcCTTCCTCATCCTTTTC
CTGGTCGACCTCTTCTTTTACCCCTTTTTGTGTACACGTTCTCAAGATTA
TAATCTCTTTTCATTTCTCAAACGCATGGTACCTTTTCGGAGaaaggaaa
gttttttttccgTGTATTTCAACTGCACTCTTAACTATATGAATAACGTC
AACTGCACCCCCAAAATCCTCAAACTTTCATTTCGCCTACTTAAATTATA
CggaatatcaaaatttattacCTATCATATTTTAGATCACATATAGTGTA
TCTAttccttttcgaaaatttccttcaaattaaggaaaattaaaatataa
atgCGATAAGCTTTCTATTTCTAGAATTTACAAATTCTTCTTTCAGAAGG
AGAATGGGATGGATTTGAAAGATCGCATTGCCTTCGCATGTAGATATCTC
TCAGATGCCAAGGTGAATTTTCCCACTATGCTTCCCCTATCGGTCGATTT
TCAAAATCTGTAATTTATTTATAGATATTTACCTTATCTGTCATCCGTCT
TATACTGACTTCAGTGAAGTATTATAAAGAGGCTCttctgtctcaaaatt
ctgcaaaatttcaagaatgtgctaatttgctgtgtaaaatcctTGTTCCG
TCTCGGACGAAAACCTGgccagggatttttctaagcactttgagcTGGGC
CGTTTTTGTATGCCTGAAAGGGAATTCCTCAGCAAAGCCGTATATTGATG
AAGCTGGGGGTTTGGTTGCTGTTCAGAGGGCGAAGctcctaaaaatattt
tgagtatGTAGATAATATTAtagatttttgtttaatttcaagtttaattt
tgctagaaaatatcttttatattttggattgagtttcaaaaagtcAATCT
TAGATTGAGTATCGTGAACGGTATACggacataaaaaagtgcttagaaag
ATCCCCTGCTTGCTTTGAACactgttttttaatattttgtatcGGCTTAC
AAAATTAGCGGGTGGGTGTGAAATACCCATTACTCAAGTTAATTTTGTTT
AATGAAAATTCATTGCTGTATTTCACTTTCAGCTCACAAATTACGTTGAA
AATGTGACATCAAAAATGATCACGAGTGGTGGTCTTGAAGGATTACTTTT
AACAGGCTTGACAACCGACGGTATTGACTTACTCGAAAACTATATCACCA
AGGTAAATTCTACTTGTTTAACGCTTTCAATGACTGAATTTACGCAGTAA
AAACGACAGCTTATTAAACATAGCCCGGGGTTATCAAAAATCACCAGAAA
GAAaattcagtcagaagtagactctaatttaaacaattttcaggattttt
accCACCCTTTATgctttgatttattttattcaGTTCTTCTCGTAAAGAA
TTTCATCATAATAGTATGGCTAGGCTTGATCTGTACCCATTAAATTATAT
TAATATAGTTATATTAATTTCCTCTTTCCAGTATGGCGACGTCCAAACAG
CAGTTCTCATCGTTTTGGTAATGAAATACAGTGACGTCATGAAAGATGAA
CGTGTCAACGATTGGATAGAATAGTATGTACACCAAGCTTCTAGGCACAT
TTTTTAGTCCATCTAATAACAATCTTTTCTCTCAACAACTGAAAATTGCA
TTGGCAAAATTATACACGTCCAAGGTTTTCAAAACAGTTGCAATTACAGC
TTCACGACTGtttctattttgaaatatctaagaactttattcttattttc
agtTACCGCTGTCTTCTCGATCGCTGGAGGATGTGGCATAAACGGTATTC
ATTTTCTAGATTGTCGAAGCACGCGCTCCTTATAAGAACCCGTATAAGAA
CCAATTTTCGCTCNCGATCGCTGGAGGATGTGGCATAAACGGTATTCATT
TTCTAGATTTTCGAAACACGCGCTCCCTATAAAAACTAGTATAAGAATCA
ATTTTCGCTTGGTAGTTTTTATTTGTCGTGATTTGGCTTGCATTAACGGG
TCTGAAGTCAGTATTTTCATACTCTGTACCTGAGtgtctcacgtttatcg
ctttgtagtacactctgtgcccATTGTCTGCTTCataattcccgtacgga
gacctctgcgatgaagtatgatttacaaatagcaacacttctctcatcgt
ctccactttctcaccaacactccatcgcagcgatcggtttgaaagatttc
aaatgagaattttgaaaattagccgtagatacggGGACTGTGTACAGACA
AGTATTTTTATAGTCATCCTTGAAAATCTGGATCTGGGGTTAGTTTGCTC
TTCGGTTTTTGCCAAATTGATGAACTCTTGTGACGAAGGGTGTTAGGGAA
GCGTGGTAATAGACTCTCTCAATTTATTGATGAACTCGAACTGTGAtcat
ttttgggacatttccTGGTTGCTAAAAGCATGCATCTGCCCAGTCCAGTC
ATTATTTTATAAGAGTTTATTAATCAAAACTTGTATttattctgaatttt
cttttcagagCACAGTTTGATTCACTGGTTCAATCAATGAGTTTACAACG
TAAAATCCCCAATCAAATAAGTGTCACTTGTACATATTGTAGTAAGCCCG
TCTCCCTTAATATGATGGCTGCAGGAGGGCTGAGATCAACACGTTTTCTT
TACGGCGGTGCAGGCGGTGCTAATCGACAAAATAAGGTAGAACTGTTGTT
TCTAACTAAACTTTCACTGTTTCACAAGAGAATGCTAGCACAATACTCTG
CTGGAATTACAGAGAACAACATATCAAATACTTTCATTTTCCACCACAAA
TTCAGACCCTTATAATATTTAACCGTCATAATATATTTACTTGTTGTATA
TACTTCAAAAAATACTGCATCAGTAAGGTTTTGAGAGTTAGCCTATTTGT
ATGACGCAAACTTTCAACCATAAATTCAAGACATttaagcgagtttatgt
attggaTGATATTGAGGACGACTgtaagtgaaatgatacaaaacaaagta
gATAATTGATGTAAAGCTATATCgtctttgctcacctaaacagacaaagg
tattttgatgtttttaccgtcgtcgatcAAAAGAGACAGCAATTTTGGAG
ACAGGACAACTTTGCTTTTTTATACCGTCTCCTTTGATTTAtcacaaata
cataaactcactatGTGGTCATATGCTGATAATTACCTCTTTTgacaatt
catttttttttcaggcaatGTCATGCCCTGGATGTCGACAACCTTTACCT
CGATGCTCAGTTTGTTTAATCAATATGGGATCTCTTTCCACACATCAACC
TCGAACAGGTTcctatatttcttttatttattttgaactatttctactgg
aaaacaaaaaattccaTGACAGTCTGTCATGGCTGATGAAGATTCATTGT
AGGAAAATATGGtagaaatcaagaaaaagccAAATTATTTCAAGAGTAAG
AACAAGTGCactaaaatcaatcaatcatcgATGTGACTCGAAATGCTAAA
CACTGATTCTAAACAATGGTggggatgggaatgtaggggTGGGATCAAAT
AAGAAAGGGGGTTTGAAGATTTTCGTCAATTTAATCTTATACAAATGTct
gttttcaagtaaaaatatgACAAGATATGCATCATTTATAATAACTTAAT
AAAAACGCTAGCTAGTTATATTGTTAAATTGTTGGCTTGTGACTGTATAC
ATTTTGTACTGTTTCTTCACTTTGGTGGTGCATTGAGCGAGTTTTATTCG
AAGTGAGGATAGGATTTCATTACCGAAGGGGATAGGTTCGATTCCAACTT
TCCTTTCTTTTTGAACAGGCAATCAGAAACCGAAACTGGAGAATAATGTC
AATTCGTTTCAAAATTGGTTTACATGGTGTCAAATGTGCCGCCATGGAGG
ACATGCCGCTCATCTCGCTGATTGGTTCGTGTAAGTGCAATCACTTGAAT
TCAAAGCGGAGATTTATTACCGTAAACCCTTTCTCTACATATCATGGTCT
ACATCATTAAATATTCGTTTAGATATTATATGAGCAATATATGTAGTAAG
TGTATAGTAGCAAGTTTTCATCTTTTATTAAAGACTTGTAACTAAAATGC
ACCGTTACAAAGCAATAAATAGCACATTTAACATGTGTACTGTATCTAAA
TGATAATTCAAACCTACGATTAATTCGTACACTAAATTCGTAGTTTTACA
AATTCTGGCTGTTAGTAAGTGACGTAGAATCAATgttactttcaaccaat
cagctgttgggtccgtaaatgacattgcaatggtgcatttCATGAATAGA
GAGTTTGATCAAAAGTAccatctttctttctttaaatttttcagtGATCA
CGTGGAATGTCCGGTAACAAGTTGTAATTGCGTGTGTAACGCCTTGGATC
GTGTGTCCATGGTCACTCCACAAGAATTACcagtaaagaaaatttctatg
TGATGATGTAAGGACTCGTGTGATGGTgggcaagaaaaagtgaggcCACT
TCCATGAATTGACGTAAGGACCTACTTGTCGTTGTTCAAAATGATTATTC
ATCCTTTGGATTTTTTTTGGTGCGAATCCACTGAATCCTGGGATCGAATG
CAATGACCTTCTTTCATTCGAAGGGAATCTTTAAAATGAATAGAATTCTT
AAATCTCTACTAAACACTTGCGCAGTGCAAGTGGCTCCAGTGGCTCCATT
TCGGTCAGTTTCTTTCAGCTTTATATAGACCCTGGAGGCAGTTTCTCAAA
CCCGgacaagcaaaatattttgattggagtttttttttaaagtggtacCC
GCATCGAAAGCGCTAGATCTAAGTGATATTGCGCCGTTTGTCGCCATGCA
AAGATTTAACACTACAATGGTCCCGAGTTTATGAAGGTCAGTTTTAGCAT
ATTCTATGCTTTTGtaggaaaaataataatattcgCTGCTAGAATAAGAT
GAACATATTCACACCGATCTGGATTCATATCGAGGTGAATTTGTAAacag
tcaatttttttcaagagtATGGATTATTCATACTTTTGCTTAAa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_038812	XLOC_038812	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_361	supercontig	scaffold_361:503442..514335 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.232118	0	0.11107	0	0	0.00126747	0.0926475	0	0	0	0	0	0.10905	1.50564	0.161363	0	0	0	0	0	0	0	0.391818	0	0

Blast

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BLAST of TCONS_00061887 vs. Swiss-Prot (Human)
Match: MIO (GATOR complex protein MIOS OS=Homo sapiens GN=MIOS PE=1 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 2.817e-91
Identity = 180/385 (46.75%), Postives = 237/385 (61.56%), Query Frame = 3

Query:   93 R*LALFLCEW--DVTDETLRERLDQLVAKNEIERAAAVALFHNKLDWTIDILGSTQANQKKELP--IVAMALSGYNDSIKKGSMWIANCQRLGQQLTNPYLRAMFAFLTAEGEDFTSVLKENGMDLKDRIAFACRYLSDAKLTNYVENVTSKMXXXXXXXXXXXXXXXXXXXXXXXNYITKYGDVQTAVLIVLVMKYSDVMKDERVNDWIEYYRCLLDRWRMWHKRAQFDSLVQSMSLQRKIPNQISVTCTYCSKPVSLNMMAAGGLRSTRFLYGGAGGANRQNKAMSCPGCRQPLPRCSVCLINMGSLSTHQPRTGNQKPKL----ENNVNSFQNWFTWCQMCRHGGHAAHLADWFVDHVECPVTSCNCVCNALDRVSMVTPQE 1223
            R LAL LC W    TD  +   L+ LV + E ERAAAVALF+  +   I IL    +++K +L   +VAMALSGY D  +K S+W   C  L  QL NPYL  MFAFLT+E   +  VL EN + ++DR+AFAC++LSD +L  Y+E +T++M  +G LEG+LLTGLT DG+DL+E+Y+ + GDVQTA   +L     DV+KDERV  WIE YR LLD WR WHKRA+FD     +    K   Q+ V+C +C K +S +  A    +   F   G  G+  ++K  SCPGCR+PLPRC++CLINMG+  +  P       K+    +  +  F NWFTWC  CRHGGHA H+  WF DH ECPV++C C C  LD    + P E
Sbjct:  490 RILALQLCGWIKKGTDVDVGPFLNSLVQEGEWERAAAVALFNLDIRRAIQILNEGASSEKGDLNLNVVAMALSGYTD--EKNSLWREMCSTLRLQLNNPYLCVMFAFLTSETGSYDGVLYENKVAVRDRVAFACKFLSDTQLNRYIEKLTNEMKEAGNLEGILLTGLTKDGVDLMESYVDRTGDVQTASYCMLQGSPLDVLKDERVQYWIENYRNLLDAWRFWHKRAEFDIHRSKLDPSSKPLAQVFVSCNFCGKSISYSCSAVPH-QGRGFSQYGVSGSPTKSKVTSCPGCRKPLPRCALCLINMGTPVSSCPGGTKSDEKVDLSKDKKLAQFNNWFTWCHNCRHGGHAGHMLSWFRDHAECPVSACTCKCMQLDTTGNLVPAE 871

The following BLAST results are available for this feature:

BLAST of TCONS_00061887 vs. Swiss-Prot (Human)

BLAST of TCONS_00061887 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MIO	2.817e-91	46.75	GATOR complex protein MIOS OS=Homo sapiens GN=MIOS...	[more]

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TCONS_00061887 (transcript) - C. hemisphaerica