TCONS_00061855 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061855
Unique NameTCONS_00061855
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1497

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061855 ID=TCONS_00061855|Name=TCONS_00061855|organism=Clytia hemisphaerica|type=transcript|length=1497bp
CCTTTGCAATGAAAGAAAATAGAGAATCAGAACCCTATTACATTATTTAC
TTTGTTCCTGTCAGCCTCTTTTAGTATATAATCAACTGAATGTACATTAC
AGTCTACCACTAGCTGTTTAGATCATCTTAGTTTCAGAGGTGCTGCAAAA
AAGTGATCAAAATGCAGACGATTCTACTTCTACTGGTTGGATTGATAACC
ATCAGCCACGGGTTTCCGTCCAAAGCTcacaatcaaaagaaagaacgCCT
TCACTACCCAGgTTATCACATCAAAGGTCCACAAAAAGACCATAAGGAGA
TAAGTTACGATGAACCAATGCCCGAAGAAGATGCACAATATGATGAAGAA
ATGTACCATGATGGTCCAAGTTACGATGGACCGGTGCCCGAAGGAGCTCC
ACAATATGATGAAGAAATGTACCAAGATGGTTTGAGCTGCAAGGATAAAT
ATTCAAATTGTCCAACTTCTTTGCGTCAATATTGCGAAAGTCACAGTTTT
GTGAAGACGGATTGGTGTCGGAAAACATGTGGTGATTGCTCACCAGACCC
AGCTCCTGCTTATGTGACAGCTGAACCGAAAATTTCAAGCTCAGAGATGG
AAAGCATCAAAGCAACTTGCTTGGCAGCTCACAATGCAAAACGAGCACTC
CACAGAGACACATCCTCAATGACTTATGACATGGACCTCGCGAAACGTGC
TCAAACCTACGCAGAATATCTCCTGGAATTCAAGCAGTGGAAACACGACG
ACTTTCGAACATATAATGGCTACGAAACTGGAGTTGGTGAAAACCTTTAT
TGGTCGTCTTCAGCAAGTGGAGCCTCTACTAACGCTGTTACTTCTTGGTA
CGACGAAATCAAGAACTACAATTATGAAACCGGCAAGTCAAACGGTGGAG
ATATTGGTCATTTCACACAATTAGTTTGGGATTCTTCAACTAAATTGGGT
TGCGGTGTTGCTAAAGGAACAGGTGGAACTTACGTCGTTTCCAGATATTT
ACCCGCCGGCAACACACAAGACCAGTACACACAGCATGTTCATGAGTTAA
TCGCGAAAAAAGATCAACAAGACGATGCTGTAGAAGAAAAAGTTTTATAA
GCCAGGATTTCCAACACAAATATTCAAGATGCTGAAAATTTGGTTACATC
GTAGAATTAATAGTATTTCCCATGAAATAACgtaaaaattataataaacC
CTTTGTTATTTTGCACACATATATCTTCAATTTGCTTAAAATATCGTCac
ttatttattttattggCTGCTTTACAGATGTAAAATTTAAACCTTCCTTT
ATTTGAAACATGCACTTTCAAGGAAATGACATCCGACATGACCTTTCGTA
TTTGTACATCTTAaattaacaagtgatacttttatggacctacctggtta
tgcatttaacacatatataattgatatctacgtgacgtgaccattaaaca
atcattcagaacacAAATAGTGACGATTTATTAAGATTAGTCCtttg
Run BLAST on NCBI

protein sequence of TCONS_00061855-protein

>TCONS_00061855-protein ID=TCONS_00061855-protein|Name=TCONS_00061855-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MQTILLLLVGLITISHGFPSKAHNQKKERLHYPGYHIKGPQKDHKEISYD
EPMPEEDAQYDEEMYHDGPSYDGPVPEGAPQYDEEMYQDGLSCKDKYSNC
PTSLRQYCESHSFVKTDWCRKTCGDCSPDPAPAYVTAEPKISSSEMESIK
ATCLAAHNAKRALHRDTSSMTYDMDLAKRAQTYAEYLLEFKQWKHDDFRT
YNGYETGVGENLYWSSSASGASTNAVTSWYDEIKNYNYETGKSNGGDIGH
FTQLVWDSSTKLGCGVAKGTGGTYVVSRYLPAGNTQDQYTQHVHELIAKK
DQQDDAVEEKVL
Run BLAST on NCBI

transcript from alignment at scaffold_361:91370..97930+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061855 ID=TCONS_00061855|Name=TCONS_00061855|organism=Clytia hemisphaerica|type=transcript|length=6561bp|location=Sequence derived from alignment at scaffold_361:91370..97930+ (Clytia hemisphaerica)
CCTTTGCAATGAAAGAAAATAGAGAATCAGAACCCTATTACATTATTTAC
TTTGTTCCTGTCAGCCTCTTTTAGTATATAATCAACTGAATGTACATTAC
AGTCTACCACTAGCTGTTTAGATCATCTTAGTTTCAGAGGTGCTGCAAAA
AAGTGATCAAAATGCAGACGATTCTACTTCTACTGGTTGGATTGATAACC
ATCAGCCACGGTAATGTTGTAATGATAATGGGGCATATTATTTTTtgcaa
tcatttttgttttaaattattttttcagttgAATCGTGTAACGTTGTCGA
AAAAGAAATCTGACATTCACTGGCCTGTACTTGCTGTCAGAACTAAATAA
ATAGAGAACAGTTTGTTTTAATCAAATGGATGAAGTAGATTACTTTAAAT
GGGTTTGCTTTCGGTTTGAACTCTACTGGGTAGGTCAAAGGTCAGTAGCA
AATTCTGCTGGAGCGTTTTCTTGTATAAAccgattttttcctttttaatt
tcAGGGTTTCCGTCCAAAGCTcacaatcaaaagaaagaacgCCTTCACTA
CCCAGGTATTGTCCTTTTACCCTTTACAGTCGCCATCTTTGCTCTTTTGT
TTATCTATACCATTTAGTACAacgatatttcaattttatacaATCAACAG
TGTGATGACCCCTTTTAAAGATAATAATGTTAGGTTCTGACAAAATTCGG
GGTATCTTCTAAGCTCCATATGGGTTGAATAAtgataataagaacaaact
aagaaCAATAAGGCTTCCATGGCCAAAATATAAACCAGTTGAgttgaagt
ttttataagatgctcacataattggttattcaaaacaaaagagatgacgc
gttttttagaaaaatataataaaagtttttgtttgaatagttaacgacca
atcccatgacaaaaattcttgtaaatgttTATCTTGACCCATATAAAGGC
CCATAtaaagagcaagttaagaacatttaaaggccttTTGCAGACTATAA
GATACGCTATTCCTTAGGAAATGGCACATTATTTACTCACAAAATCGGGA
AAGTTAGAGCCtattaagaacattcttaggctTGAAATAGAAGTTAAAGa
tcattcgaaggcttcaacaattttgaatattcttataaaaaacatgtaca
ttaATTAGCTTTACAGAATCAAGTAGTCGTTTTCATTCTGTTTTGGCCTG
TGCTATATCTACTGATTAAAGTTGTATAATTGTACGTGTAGGGGGAGGTA
ATACCCTATTAGCAAATCATATTAACATGTACAAATCCAAAGCCATGTCA
AATAATCCCCATGTTATTATCATCGtcttattttcttcaaaacGCCTACT
GATGAGATTATTATCAAGTTTTATACCGACGTAATGAATTTCCTTAATCT
TTAGCAATGAGAGAACTCAATAGCACTTTCACGCCCAAATGGCAAATCAT
AATTCACGTAAATAAAAATTGTTGATGAGTCGTTTTGTTAAAAAAGTTCT
GCTCTTAGCGTTATGATCAAATGACAATCGACACATAACAATTTTCAAAG
GTCTCATCGATATAGCTCTTGTATGAAGCCTGAGTTAATGAAATCACAAC
TTgaaaatagacaaaagattCATTCatagaatgggcttttccagaaaaaa
tttgaatgtggGGGTAGAGGATATAACAAATTTACCCCCCAGACAAGaca
aattttgatgaatttccgCTACCCCCGAACAATATAtcctctcccccccc
ccccatgtacgaacattttctgaaaGAGCCAAATATTGGTTTAATCATCA
GACGATAGTGAATGTAGTACTACAAATCTAGACATGAAAACTAATATTTA
ATTCATATCACCTTGAAAAGATGATGACATATATTCTACACCTGTTAAAT
TTTGAATAGTAAAAACATTCTTATAACCCAACGTCACAGGCTAAATATCA
AacgaccattgagtttcaagcccgaagggctagagacgAAACTTTAAGCC
ATCTCaagcaagagaaattgaagccacttatttcacatccaaaacgcgca
tagaacgtgccgtaatcatgacgacgaatTGTATCTAgcagttcctttgt
tttggaggactacattttttgaaatctagcgNAGAACgtgccgtaatcat
gacgacgaatTGTATCTAgcagttcctttgttttggaggactacattttt
tgaaatctagcgatagattttagtttcaatctggcgtttgcgtaaaaact
acgcgcgggcgttctggatgggaaataagtggtttcatttcccatccagc
attctcgcctctagcccttcgggcttgagaCTCAATGCAAAGTACGTCAA
GGAAAGCCAAACTGCGATGTTAACTCGGTGTTTTTCGCTGAGAATAACTT
ATAACACCTAAACACTGAATTTTCCCAAGGCCAAACAACACGTGTCCCAT
CTAGCCCGGCTTCCTTAGGACAAACCCATCCGTTTAATCTGAAAATTCGC
TTTTTGTGCAGCCGGTATTATTGGTGATTGGTTCACAGCAGGGCCAATTC
TttggataaatctttttttatcaaGCGGTGAATTTATTTGATTATATACA
AAAACGCACTTGAACAAATTAATTAGCGTGTTATGAAAATTTATGCCACT
GCTCAGTGTCACCTTCAGACTGACGTAAATTGCATAcattgtacatgttt
ttttgataacaacaaactatataaaaacataaggcttcgatggccaaaat
atcctTTACTTTctctaaaacatccaatttcataggaaaatagactaaaa
tattcacaaaatggtgtaAATAAGAAGACACGTTAAAGAAcatttgaaaa
gtaaaaaaacctAAGAGCGTCCAAAGGCTTCCAAAGATTTTTATGTTCTG
TGTTAATGTGCCGGTGCGTGACAGAGCTAATTTTGAAACCATACGACGGG
TCAGTAAACTTCATCGATTGTGGATGATCACTTTTTGAGTAAAATGTTTT
GCTCCACCTTTTACAGTCACCTTTCACGATTATCTTTCTGGTATATTTAT
TGTCAAAAGCCTGtaaatcaaattttcaagatAGAAAAAGGTCGCTTGTG
TCATTACAATAAAGGAAAAGCTTCCCTCCTCCCATGCACTTGACGAGAAA
AGTGCCATTTTTGACATACAATCATAAAACTAGTTAGCAACTAACGATAA
TGCATCAATCACTACGTGAAATCTTTCATCCTTTTCCATAAGACGTGTCA
AAATTATGAATATAAAAGCACATAAGATGAATGCAAAAAGCATAACTGTC
CTGTCGTAGTCAAAAGGACAAGGATATTTTCGAATATTCAAAGGACTCAC
GATGCAGATCTTTATCTTTTCGTTGATTGCTTCGATCGCATACACTCAAG
GTGAGATCTAAATTGACTTTCCAAACCATCTAAATTGAACCGTTGGACCT
TTTCAGTGaaatatatttcttgaaaatgaaacTGTTAATGTTAGATGAAT
TAAGAAACGTTGCGAGCTTTGTAATACATCGTcactttaatatttttcaa
ggTTATCACATCAAAGGTCCACAAAAAGACCATAAGGAGATAAGTGAGTG
ATTATGATTTTTGTCTTTTCCCTTATGAAGCATTATATTATGAAGCCCAT
TATCCTATTCAATAATCCCcctttttttgctaaaaatttgaaaaaacccg
GAAGCAAACTGACTTTTGAACAAGAATGCCCTTTGAGGGAGTGCTTCAGA
GTCCGGTATTCCGGTATTCCGGTTATGAGTAGAAAAATTACCGGTATTCC
AGTATTTAAGATGCCTGCCGGTACCGGTATTTACAGAGATATATACTGGT
ATTTCAGTGAAGGATTAGAAAATGACCGGTATTCTGGTATTTTGTACCCT
CGGAAGCCCCCCACCTTTGACTTTCACAATTGCACCTTTCTGGCAGAAAC
ATAAGACGGGGATAATGGCAATATAACCCTTGTCTCGTACTTCAGCTCGA
GGAAGTCAAaggcaaaaaataaataaataacaaaacatttttgttcAATC
AAGGTTACGATGAACCAATGCCCGAAGAAGATGCACAATATGATGAAGAA
ATGTACCATGATGGTCCAAGTGAgtcttttcaaatatttttgtattttgt
attttttgtattCAACATATAGAGTATCGCTCGGTAGATTAGGACGGACC
AATGTCATATACAACTCTTGTCTTGTACTTCAACACGAAGAAggtcaaaa
aataaataagaaaaactttattgttCAAGGTTACGATGGACCGGTGCCCG
AAGGAGCTCCACAATATGATGAAGAAATGTACCAAGATGGTTTGAGTGAG
TAGTTTTGATATTTCCTTTGACGACAAGGAAGTGATTGAAAGTGAGGCTA
AGTCTTGCTTTCCATGGGTTTCAAAATGTTATCACCAGTCCAAACGCTGA
GTCTAAAATGTCTGGAATTATTTTGGGATTGGAgattgatttcttttgtt
tacaaaGAGTTGAAATTATAATCGTAATTTCTTCTTTAGGCTGCAAGGAT
AAATATTCAAATTGTCCAACTTCTTTGCGTCAATATTGCGAAAGTCACAG
TTTTGTGAAGACGGATTGGTGTCGGAAAACATGTGGTGATTGCTCACCAG
ACCCAGCTCCTGGTAAGATATAATCGAAATCAATATATTAGTAGTAGAAC
CtctttttagactttttataaatttaaaaaaataaaatttaaccaTCATG
CTTTGCTGCAAGGTAGTTGTTTTGAGAACATTCATTATCGTTAAGACTCA
ATGTAGACCAGTTAGACTTAGCTCAAAAAATGGGATAAATATTCAATACT
TTTTATACTATTACTTTTCACAGCTTATGTGACAGCTGAACCGAAAATTT
CAAGCTCAGAGATGGAAAGCATCAAAGGTATGACTTTCAGTGAATTCCTG
AACGctggtaaaaaaattaatctcGTTGGAGTGGCTATAAATGAACAAAA
TATTATAGTAAAGAAGTTACAAgacaaaagaagaaagaaaccAAATATCA
CTAATTGTGaatgttcaattgttttacaagtttgttttggacacgtgatt
ttaattgttctctttataTAATGACACGTGTTTCGCGCAATGTTTAAATT
TTACTACTGTTATCTCCCTTTAAATGNAATGACACGTGGTACGCGCAATG
TTTAAATTTTactactgttatgtccctttaaattttTGTTAAGCTACAGt
tattcttattttcttgtttatCATAAAAGCAACTTGCTTGGCAGCTCACA
ATGCAAAACGAGCACTCCACAGAGACACATCCTCAATGACTTATGACATG
GACCTCGCGAAACGTGCTCAAACCTACGCAGAATATCTCCTGGAATTCAA
GCAGTGGAAACACGACGACTTTCGAACATATAATGGCTACGAAACTGGAG
TTGGTGAAAACCTTTATTGGTCGTCTTCAGCAAGTGGAGCCTCTACTAAC
GCTGTTACTTCTTGGTAAGATTACTAAGATTAATAAAACTCAATAATTCG
AGAAGGATTCTCatctatataataataatagtaGATATACGTATTTGAAC
ACTTTCTCTGCGTGTTTTGATGTTTGCTAGCGATTTCAGATTTCCGTAAT
TCTTTTTCCCGGGGATATAATTTGCATCAACATTTTTTAGCATAAACCCA
GATGATACATATTGGTGATTTTTGTTTCCTGAATATTGTCTATgactttt
aaagattttaacaaTAGGCTGCGGAAAACCTACGAATTCCTCTACATTGA
ATATTGAGTGATCCGTAATCTTTCTAAATTTGTGGTATTTTAAAGGATTT
AGCCCCTTGAAACACAATGCTAAAAACAGTTGCCATGAAAACATTCTTTG
ATTTGATCTAGGTACGACGAAATCAAGAACTACAATTATGAAACCGGCAA
GTCAAACGGTGGAGATATTGGTCATTTCACACAATTAGTTTGGGATTCTT
CAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTACGTC
GTTTCCAGATATTTACCCGCCGGCAACACACAAGACCAGTACACACAGCA
TGTTCATGAGTTAATCGCGAAAAAAGATCAACAAGACGATGCTGTAGAAG
AAAAAGTTTTATAAGCCAGGATTTCCAACACAAATATTCAAGATGCTGAA
AATTTGGTTACATCGTAGAATTAATAGTATTTCCCATGAAATAACgtaaa
aattataataaacCCTTTGTTATTTTGCACACATATATCTTCAATTTGCT
TAAAATATCGTCacttatttattttattggCTGCTTTACAGATGTAAAAT
TTAAACCTTCCTTTATTTGAAACATGCACTTTCAAGGAAATGACATCCGA
CATGACCTTTCGTATTTGTACATCTTAaattaacaagtgatacttttatg
gacctacctggttatgcatttaacacatatataattgatatctacgtgac
gtgaccattaaacaatcattcagaacacAAATAGTGACGATTTATTAAGA
TTAGTCCtttg

Coding sequence (CDS) from alignment at scaffold_361:91370..97930+

>TCONS_00061855 ID=TCONS_00061855|Name=TCONS_00061855|organism=Clytia hemisphaerica|type=CDS|length=8451bp|location=Sequence derived from alignment at scaffold_361:91370..97930+ (Clytia hemisphaerica)
ATGCAGACGATTCTACTTCTACTGGTTGGATTGATAACCATCAGCCACGG
GTTTCCGTCCAAAGCTcacaatcaaaagaaagaacgCCTTCACTACCCAG
gTTATCACATCAAAGGTCCACAAAAAGACCATAAGGAGATAAGTTACGAT
GAACCAATGCCCGAAGAAGATGCACAATATGATGAAGAAATGTACCATGA
TGGTCCAAGTTACGATGGACCGGTGCCCGAAGGAGCTCCACAATATGATG
AAGAAATGTACCAAGATGGTTTGAGCTGCAAGGATAAATATTCAAATTGT
CCAACTTCTTTGCGTCAATATTGCGAAAGTCACAGTTTTGTGAAGACGGA
TTGGTGTCGGAAAACATGTGGTGATTGCTCACCAGACCCAGCTCCTGCTT
ATGTGACAGCTGAACCGAAAATTTCAAGCTCAGAGATGGAAAGCATCAAA
GCAACTTGCTTGGCAGCTCACAATGCAAAACGAGCACTCCACAGAGACAC
ATCCTCAATGACTTATGACATGGACCTCGCGAAACGTGCTCAAACCTACG
CAGAATATCTCCTGGAATTCAAGCAGTGGAAACACGACGACTTTCGAACA
TATAATGGCTACGAAACTGGAGTTGGTGAAAACCTTTATTGGTCGTCTTC
AGCAAGTGGAGCCTCTACTAACGCTGTTACTTCTTGGTACGACGAAATCA
AGAACTACAATTATGAAACCGGCAAGTCAAACGGTGGAGATATTGGTCAT
TTCACACAATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGC
TAAAGGAACAGGTGGAACTTACGTCGTTTCCAGATATTTACCCGCCGGCA
ACACACAAGACCAGTACACACAGCATGTTCATGAGTTAATCGCGAAAAAA
GATCAACAAGACGATGCTGTAGAAGAAAAAGTTTTATAAATGCAGACGAT
TCTACTTCTACTGGTTGGATTGATAACCATCAGCCACGGGTTTCCGTCCA
AAGCTcacaatcaaaagaaagaacgCCTTCACTACCCAGgTTATCACATC
AAAGGTCCACAAAAAGACCATAAGGAGATAAGTTACGATGAACCAATGCC
CGAAGAAGATGCACAATATGATGAAGAAATGTACCATGATGGTCCAAGTT
ACGATGGACCGGTGCCCGAAGGAGCTCCACAATATGATGAAGAAATGTAC
CAAGATGGTTTGAGCTGCAAGGATAAATATTCAAATTGTCCAACTTCTTT
GCGTCAATATTGCGAAAGTCACAGTTTTGTGAAGACGGATTGGTGTCGGA
AAACATGTGGTGATTGCTCACCAGACCCAGCTCCTGCTTATGTGACAGCT
GAACCGAAAATTTCAAGCTCAGAGATGGAAAGCATCAAAGCAACTTGCTT
GGCAGCTCACAATGCAAAACGAGCACTCCACAGAGACACATCCTCAATGA
CTTATGACATGGACCTCGCGAAACGTGCTCAAACCTACGCAGAATATCTC
CTGGAATTCAAGCAGTGGAAACACGACGACTTTCGAACATATAATGGCTA
CGAAACTGGAGTTGGTGAAAACCTTTATTGGTCGTCTTCAGCAAGTGGAG
CCTCTACTAACGCTGTTACTTCTTGGTACGACGAAATCAAGAACTACAAT
TATGAAACCGGCAAGTCAAACGGTGGAGATATTGGTCATTTCACACAATT
AGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAG
GTGGAACTTACGTCGTTTCCAGATATTTACCCGCCGGCAACACACAAGAC
CAGTACACACAGCATGTTCATGAGTTAATCGCGAAAAAAGATCAACAAGA
CGATGCTGTAGAAGAAAAAGTTTTATAAATGCAGACGATTCTACTTCTAC
TGGTTGGATTGATAACCATCAGCCACGGGTTTCCGTCCAAAGCTcacaat
caaaagaaagaacgCCTTCACTACCCAGgTTATCACATCAAAGGTCCACA
AAAAGACCATAAGGAGATAAGTTACGATGAACCAATGCCCGAAGAAGATG
CACAATATGATGAAGAAATGTACCATGATGGTCCAAGTTACGATGGACCG
GTGCCCGAAGGAGCTCCACAATATGATGAAGAAATGTACCAAGATGGTTT
GAGCTGCAAGGATAAATATTCAAATTGTCCAACTTCTTTGCGTCAATATT
GCGAAAGTCACAGTTTTGTGAAGACGGATTGGTGTCGGAAAACATGTGGT
GATTGCTCACCAGACCCAGCTCCTGCTTATGTGACAGCTGAACCGAAAAT
TTCAAGCTCAGAGATGGAAAGCATCAAAGCAACTTGCTTGGCAGCTCACA
ATGCAAAACGAGCACTCCACAGAGACACATCCTCAATGACTTATGACATG
GACCTCGCGAAACGTGCTCAAACCTACGCAGAATATCTCCTGGAATTCAA
GCAGTGGAAACACGACGACTTTCGAACATATAATGGCTACGAAACTGGAG
TTGGTGAAAACCTTTATTGGTCGTCTTCAGCAAGTGGAGCCTCTACTAAC
GCTGTTACTTCTTGGTACGACGAAATCAAGAACTACAATTATGAAACCGG
CAAGTCAAACGGTGGAGATATTGGTCATTTCACACAATTAGTTTGGGATT
CTTCAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTAC
GTCGTTTCCAGATATTTACCCGCCGGCAACACACAAGACCAGTACACACA
GCATGTTCATGAGTTAATCGCGAAAAAAGATCAACAAGACGATGCTGTAG
AAGAAAAAGTTTTATAAATGCAGACGATTCTACTTCTACTGGTTGGATTG
ATAACCATCAGCCACGGGTTTCCGTCCAAAGCTcacaatcaaaagaaaga
acgCCTTCACTACCCAGgTTATCACATCAAAGGTCCACAAAAAGACCATA
AGGAGATAAGTTACGATGAACCAATGCCCGAAGAAGATGCACAATATGAT
GAAGAAATGTACCATGATGGTCCAAGTTACGATGGACCGGTGCCCGAAGG
AGCTCCACAATATGATGAAGAAATGTACCAAGATGGTTTGAGCTGCAAGG
ATAAATATTCAAATTGTCCAACTTCTTTGCGTCAATATTGCGAAAGTCAC
AGTTTTGTGAAGACGGATTGGTGTCGGAAAACATGTGGTGATTGCTCACC
AGACCCAGCTCCTGCTTATGTGACAGCTGAACCGAAAATTTCAAGCTCAG
AGATGGAAAGCATCAAAGCAACTTGCTTGGCAGCTCACAATGCAAAACGA
GCACTCCACAGAGACACATCCTCAATGACTTATGACATGGACCTCGCGAA
ACGTGCTCAAACCTACGCAGAATATCTCCTGGAATTCAAGCAGTGGAAAC
ACGACGACTTTCGAACATATAATGGCTACGAAACTGGAGTTGGTGAAAAC
CTTTATTGGTCGTCTTCAGCAAGTGGAGCCTCTACTAACGCTGTTACTTC
TTGGTACGACGAAATCAAGAACTACAATTATGAAACCGGCAAGTCAAACG
GTGGAGATATTGGTCATTTCACACAATTAGTTTGGGATTCTTCAACTAAA
TTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTACGTCGTTTCCAG
ATATTTACCCGCCGGCAACACACAAGACCAGTACACACAGCATGTTCATG
AGTTAATCGCGAAAAAAGATCAACAAGACGATGCTGTAGAAGAAAAAGTT
TTATAAATGCAGACGATTCTACTTCTACTGGTTGGATTGATAACCATCAG
CCACGGGTTTCCGTCCAAAGCTcacaatcaaaagaaagaacgCCTTCACT
ACCCAGgTTATCACATCAAAGGTCCACAAAAAGACCATAAGGAGATAAGT
TACGATGAACCAATGCCCGAAGAAGATGCACAATATGATGAAGAAATGTA
CCATGATGGTCCAAGTTACGATGGACCGGTGCCCGAAGGAGCTCCACAAT
ATGATGAAGAAATGTACCAAGATGGTTTGAGCTGCAAGGATAAATATTCA
AATTGTCCAACTTCTTTGCGTCAATATTGCGAAAGTCACAGTTTTGTGAA
GACGGATTGGTGTCGGAAAACATGTGGTGATTGCTCACCAGACCCAGCTC
CTGCTTATGTGACAGCTGAACCGAAAATTTCAAGCTCAGAGATGGAAAGC
ATCAAAGCAACTTGCTTGGCAGCTCACAATGCAAAACGAGCACTCCACAG
AGACACATCCTCAATGACTTATGACATGGACCTCGCGAAACGTGCTCAAA
CCTACGCAGAATATCTCCTGGAATTCAAGCAGTGGAAACACGACGACTTT
CGAACATATAATGGCTACGAAACTGGAGTTGGTGAAAACCTTTATTGGTC
GTCTTCAGCAAGTGGAGCCTCTACTAACGCTGTTACTTCTTGGTACGACG
AAATCAAGAACTACAATTATGAAACCGGCAAGTCAAACGGTGGAGATATT
GGTCATTTCACACAATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGG
TGTTGCTAAAGGAACAGGTGGAACTTACGTCGTTTCCAGATATTTACCCG
CCGGCAACACACAAGACCAGTACACACAGCATGTTCATGAGTTAATCGCG
AAAAAAGATCAACAAGACGATGCTGTAGAAGAAAAAGTTTTATAAATGCA
GACGATTCTACTTCTACTGGTTGGATTGATAACCATCAGCCACGGGTTTC
CGTCCAAAGCTcacaatcaaaagaaagaacgCCTTCACTACCCAGgTTAT
CACATCAAAGGTCCACAAAAAGACCATAAGGAGATAAGTTACGATGAACC
AATGCCCGAAGAAGATGCACAATATGATGAAGAAATGTACCATGATGGTC
CAAGTTACGATGGACCGGTGCCCGAAGGAGCTCCACAATATGATGAAGAA
ATGTACCAAGATGGTTTGAGCTGCAAGGATAAATATTCAAATTGTCCAAC
TTCTTTGCGTCAATATTGCGAAAGTCACAGTTTTGTGAAGACGGATTGGT
GTCGGAAAACATGTGGTGATTGCTCACCAGACCCAGCTCCTGCTTATGTG
ACAGCTGAACCGAAAATTTCAAGCTCAGAGATGGAAAGCATCAAAGCAAC
TTGCTTGGCAGCTCACAATGCAAAACGAGCACTCCACAGAGACACATCCT
CAATGACTTATGACATGGACCTCGCGAAACGTGCTCAAACCTACGCAGAA
TATCTCCTGGAATTCAAGCAGTGGAAACACGACGACTTTCGAACATATAA
TGGCTACGAAACTGGAGTTGGTGAAAACCTTTATTGGTCGTCTTCAGCAA
GTGGAGCCTCTACTAACGCTGTTACTTCTTGGTACGACGAAATCAAGAAC
TACAATTATGAAACCGGCAAGTCAAACGGTGGAGATATTGGTCATTTCAC
ACAATTAGTTTGGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAAAG
GAACAGGTGGAACTTACGTCGTTTCCAGATATTTACCCGCCGGCAACACA
CAAGACCAGTACACACAGCATGTTCATGAGTTAATCGCGAAAAAAGATCA
ACAAGACGATGCTGTAGAAGAAAAAGTTTTATAAATGCAGACGATTCTAC
TTCTACTGGTTGGATTGATAACCATCAGCCACGGGTTTCCGTCCAAAGCT
cacaatcaaaagaaagaacgCCTTCACTACCCAGgTTATCACATCAAAGG
TCCACAAAAAGACCATAAGGAGATAAGTTACGATGAACCAATGCCCGAAG
AAGATGCACAATATGATGAAGAAATGTACCATGATGGTCCAAGTTACGAT
GGACCGGTGCCCGAAGGAGCTCCACAATATGATGAAGAAATGTACCAAGA
TGGTTTGAGCTGCAAGGATAAATATTCAAATTGTCCAACTTCTTTGCGTC
AATATTGCGAAAGTCACAGTTTTGTGAAGACGGATTGGTGTCGGAAAACA
TGTGGTGATTGCTCACCAGACCCAGCTCCTGCTTATGTGACAGCTGAACC
GAAAATTTCAAGCTCAGAGATGGAAAGCATCAAAGCAACTTGCTTGGCAG
CTCACAATGCAAAACGAGCACTCCACAGAGACACATCCTCAATGACTTAT
GACATGGACCTCGCGAAACGTGCTCAAACCTACGCAGAATATCTCCTGGA
ATTCAAGCAGTGGAAACACGACGACTTTCGAACATATAATGGCTACGAAA
CTGGAGTTGGTGAAAACCTTTATTGGTCGTCTTCAGCAAGTGGAGCCTCT
ACTAACGCTGTTACTTCTTGGTACGACGAAATCAAGAACTACAATTATGA
AACCGGCAAGTCAAACGGTGGAGATATTGGTCATTTCACACAATTAGTTT
GGGATTCTTCAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGA
ACTTACGTCGTTTCCAGATATTTACCCGCCGGCAACACACAAGACCAGTA
CACACAGCATGTTCATGAGTTAATCGCGAAAAAAGATCAACAAGACGATG
CTGTAGAAGAAAAAGTTTTATAAATGCAGACGATTCTACTTCTACTGGTT
GGATTGATAACCATCAGCCACGGGTTTCCGTCCAAAGCTcacaatcaaaa
gaaagaacgCCTTCACTACCCAGgTTATCACATCAAAGGTCCACAAAAAG
ACCATAAGGAGATAAGTTACGATGAACCAATGCCCGAAGAAGATGCACAA
TATGATGAAGAAATGTACCATGATGGTCCAAGTTACGATGGACCGGTGCC
CGAAGGAGCTCCACAATATGATGAAGAAATGTACCAAGATGGTTTGAGCT
GCAAGGATAAATATTCAAATTGTCCAACTTCTTTGCGTCAATATTGCGAA
AGTCACAGTTTTGTGAAGACGGATTGGTGTCGGAAAACATGTGGTGATTG
CTCACCAGACCCAGCTCCTGCTTATGTGACAGCTGAACCGAAAATTTCAA
GCTCAGAGATGGAAAGCATCAAAGCAACTTGCTTGGCAGCTCACAATGCA
AAACGAGCACTCCACAGAGACACATCCTCAATGACTTATGACATGGACCT
CGCGAAACGTGCTCAAACCTACGCAGAATATCTCCTGGAATTCAAGCAGT
GGAAACACGACGACTTTCGAACATATAATGGCTACGAAACTGGAGTTGGT
GAAAACCTTTATTGGTCGTCTTCAGCAAGTGGAGCCTCTACTAACGCTGT
TACTTCTTGGTACGACGAAATCAAGAACTACAATTATGAAACCGGCAAGT
CAAACGGTGGAGATATTGGTCATTTCACACAATTAGTTTGGGATTCTTCA
ACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTACGTCGT
TTCCAGATATTTACCCGCCGGCAACACACAAGACCAGTACACACAGCATG
TTCATGAGTTAATCGCGAAAAAAGATCAACAAGACGATGCTGTAGAAGAA
AAAGTTTTATAAATGCAGACGATTCTACTTCTACTGGTTGGATTGATAAC
CATCAGCCACGGGTTTCCGTCCAAAGCTcacaatcaaaagaaagaacgCC
TTCACTACCCAGgTTATCACATCAAAGGTCCACAAAAAGACCATAAGGAG
ATAAGTTACGATGAACCAATGCCCGAAGAAGATGCACAATATGATGAAGA
AATGTACCATGATGGTCCAAGTTACGATGGACCGGTGCCCGAAGGAGCTC
CACAATATGATGAAGAAATGTACCAAGATGGTTTGAGCTGCAAGGATAAA
TATTCAAATTGTCCAACTTCTTTGCGTCAATATTGCGAAAGTCACAGTTT
TGTGAAGACGGATTGGTGTCGGAAAACATGTGGTGATTGCTCACCAGACC
CAGCTCCTGCTTATGTGACAGCTGAACCGAAAATTTCAAGCTCAGAGATG
GAAAGCATCAAAGCAACTTGCTTGGCAGCTCACAATGCAAAACGAGCACT
CCACAGAGACACATCCTCAATGACTTATGACATGGACCTCGCGAAACGTG
CTCAAACCTACGCAGAATATCTCCTGGAATTCAAGCAGTGGAAACACGAC
GACTTTCGAACATATAATGGCTACGAAACTGGAGTTGGTGAAAACCTTTA
TTGGTCGTCTTCAGCAAGTGGAGCCTCTACTAACGCTGTTACTTCTTGGT
ACGACGAAATCAAGAACTACAATTATGAAACCGGCAAGTCAAACGGTGGA
GATATTGGTCATTTCACACAATTAGTTTGGGATTCTTCAACTAAATTGGG
TTGCGGTGTTGCTAAAGGAACAGGTGGAACTTACGTCGTTTCCAGATATT
TACCCGCCGGCAACACACAAGACCAGTACACACAGCATGTTCATGAGTTA
ATCGCGAAAAAAGATCAACAAGACGATGCTGTAGAAGAAAAAGTTTTATA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038800XLOC_038800Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061855-exon-scaffold_361-1491911889:91370..91579TCONS_00061855-exon-scaffold_361-1491911889:91370..91579Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1510915933:91370..91579TCONS_00061855-exon-scaffold_361-1510915933:91370..91579Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1575043694:91370..91579TCONS_00061855-exon-scaffold_361-1575043694:91370..91579Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1491911889:91874..91924TCONS_00061855-exon-scaffold_361-1491911889:91874..91924Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1510915933:91874..91924TCONS_00061855-exon-scaffold_361-1510915933:91874..91924Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1575043694:91874..91924TCONS_00061855-exon-scaffold_361-1575043694:91874..91924Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1491911889:94921..94962TCONS_00061855-exon-scaffold_361-1491911889:94921..94962Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1510915933:94921..94962TCONS_00061855-exon-scaffold_361-1510915933:94921..94962Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1575043694:94921..94962TCONS_00061855-exon-scaffold_361-1575043694:94921..94962Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1491911889:95423..95488TCONS_00061855-exon-scaffold_361-1491911889:95423..95488Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1510915933:95423..95488TCONS_00061855-exon-scaffold_361-1510915933:95423..95488Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1575043694:95423..95488TCONS_00061855-exon-scaffold_361-1575043694:95423..95488Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1491911889:95649..95714TCONS_00061855-exon-scaffold_361-1491911889:95649..95714Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1510915933:95649..95714TCONS_00061855-exon-scaffold_361-1510915933:95649..95714Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1575043694:95649..95714TCONS_00061855-exon-scaffold_361-1575043694:95649..95714Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1491911889:95909..96031TCONS_00061855-exon-scaffold_361-1491911889:95909..96031Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1510915933:95909..96031TCONS_00061855-exon-scaffold_361-1510915933:95909..96031Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1575043694:95909..96031TCONS_00061855-exon-scaffold_361-1575043694:95909..96031Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1491911889:96243..96296TCONS_00061855-exon-scaffold_361-1491911889:96243..96296Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1510915933:96243..96296TCONS_00061855-exon-scaffold_361-1510915933:96243..96296Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1575043694:96243..96296TCONS_00061855-exon-scaffold_361-1575043694:96243..96296Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1491911889:96649..96883TCONS_00061855-exon-scaffold_361-1491911889:96649..96883Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1510915933:96649..96883TCONS_00061855-exon-scaffold_361-1510915933:96649..96883Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1575043694:96649..96883TCONS_00061855-exon-scaffold_361-1575043694:96649..96883Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1491911889:97281..97930TCONS_00061855-exon-scaffold_361-1491911889:97281..97930Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1510915933:97281..97930TCONS_00061855-exon-scaffold_361-1510915933:97281..97930Clytia hemisphaericaexon
TCONS_00061855-exon-scaffold_361-1575043694:97281..97930TCONS_00061855-exon-scaffold_361-1575043694:97281..97930Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061855-proteinTCONS_00061855-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:91370..97930 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.266425	1.91838	1.46771	0.344114	0.873642	104.557	105.363	0.0731478	0.129318	0.491477	1.59728	125.543	190.062	2.50371	1.64742	2.53433	0.971085	2.10758	1.38513	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR002413V5_allergen
IPR003582ShKT_dom
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061855 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top