XLOC_038800 (gene) - C. hemisphaerica

Overview
NameXLOC_038800
Unique NameXLOC_038800
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:91370..97930+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038800 ID=XLOC_038800|Name=XLOC_038800|organism=Clytia hemisphaerica|type=gene|length=6561bp|location=Sequence derived from alignment at scaffold_361:91370..97930+ (Clytia hemisphaerica)
CCTTTGCAATGAAAGAAAATAGAGAATCAGAACCCTATTACATTATTTAC TTTGTTCCTGTCAGCCTCTTTTAGTATATAATCAACTGAATGTACATTAC AGTCTACCACTAGCTGTTTAGATCATCTTAGTTTCAGAGGTGCTGCAAAA AAGTGATCAAAATGCAGACGATTCTACTTCTACTGGTTGGATTGATAACC ATCAGCCACGGTAATGTTGTAATGATAATGGGGCATATTATTTTTtgcaa tcatttttgttttaaattattttttcagttgAATCGTGTAACGTTGTCGA AAAAGAAATCTGACATTCACTGGCCTGTACTTGCTGTCAGAACTAAATAA ATAGAGAACAGTTTGTTTTAATCAAATGGATGAAGTAGATTACTTTAAAT GGGTTTGCTTTCGGTTTGAACTCTACTGGGTAGGTCAAAGGTCAGTAGCA AATTCTGCTGGAGCGTTTTCTTGTATAAAccgattttttcctttttaatt tcAGGGTTTCCGTCCAAAGCTcacaatcaaaagaaagaacgCCTTCACTA CCCAGGTATTGTCCTTTTACCCTTTACAGTCGCCATCTTTGCTCTTTTGT TTATCTATACCATTTAGTACAacgatatttcaattttatacaATCAACAG TGTGATGACCCCTTTTAAAGATAATAATGTTAGGTTCTGACAAAATTCGG GGTATCTTCTAAGCTCCATATGGGTTGAATAAtgataataagaacaaact aagaaCAATAAGGCTTCCATGGCCAAAATATAAACCAGTTGAgttgaagt ttttataagatgctcacataattggttattcaaaacaaaagagatgacgc gttttttagaaaaatataataaaagtttttgtttgaatagttaacgacca atcccatgacaaaaattcttgtaaatgttTATCTTGACCCATATAAAGGC CCATAtaaagagcaagttaagaacatttaaaggccttTTGCAGACTATAA GATACGCTATTCCTTAGGAAATGGCACATTATTTACTCACAAAATCGGGA AAGTTAGAGCCtattaagaacattcttaggctTGAAATAGAAGTTAAAGa tcattcgaaggcttcaacaattttgaatattcttataaaaaacatgtaca ttaATTAGCTTTACAGAATCAAGTAGTCGTTTTCATTCTGTTTTGGCCTG TGCTATATCTACTGATTAAAGTTGTATAATTGTACGTGTAGGGGGAGGTA ATACCCTATTAGCAAATCATATTAACATGTACAAATCCAAAGCCATGTCA AATAATCCCCATGTTATTATCATCGtcttattttcttcaaaacGCCTACT GATGAGATTATTATCAAGTTTTATACCGACGTAATGAATTTCCTTAATCT TTAGCAATGAGAGAACTCAATAGCACTTTCACGCCCAAATGGCAAATCAT AATTCACGTAAATAAAAATTGTTGATGAGTCGTTTTGTTAAAAAAGTTCT GCTCTTAGCGTTATGATCAAATGACAATCGACACATAACAATTTTCAAAG GTCTCATCGATATAGCTCTTGTATGAAGCCTGAGTTAATGAAATCACAAC TTgaaaatagacaaaagattCATTCatagaatgggcttttccagaaaaaa tttgaatgtggGGGTAGAGGATATAACAAATTTACCCCCCAGACAAGaca aattttgatgaatttccgCTACCCCCGAACAATATAtcctctcccccccc ccccatgtacgaacattttctgaaaGAGCCAAATATTGGTTTAATCATCA GACGATAGTGAATGTAGTACTACAAATCTAGACATGAAAACTAATATTTA ATTCATATCACCTTGAAAAGATGATGACATATATTCTACACCTGTTAAAT TTTGAATAGTAAAAACATTCTTATAACCCAACGTCACAGGCTAAATATCA AacgaccattgagtttcaagcccgaagggctagagacgAAACTTTAAGCC ATCTCaagcaagagaaattgaagccacttatttcacatccaaaacgcgca tagaacgtgccgtaatcatgacgacgaatTGTATCTAgcagttcctttgt tttggaggactacattttttgaaatctagcgNAGAACgtgccgtaatcat gacgacgaatTGTATCTAgcagttcctttgttttggaggactacattttt tgaaatctagcgatagattttagtttcaatctggcgtttgcgtaaaaact acgcgcgggcgttctggatgggaaataagtggtttcatttcccatccagc attctcgcctctagcccttcgggcttgagaCTCAATGCAAAGTACGTCAA GGAAAGCCAAACTGCGATGTTAACTCGGTGTTTTTCGCTGAGAATAACTT ATAACACCTAAACACTGAATTTTCCCAAGGCCAAACAACACGTGTCCCAT CTAGCCCGGCTTCCTTAGGACAAACCCATCCGTTTAATCTGAAAATTCGC TTTTTGTGCAGCCGGTATTATTGGTGATTGGTTCACAGCAGGGCCAATTC TttggataaatctttttttatcaaGCGGTGAATTTATTTGATTATATACA AAAACGCACTTGAACAAATTAATTAGCGTGTTATGAAAATTTATGCCACT GCTCAGTGTCACCTTCAGACTGACGTAAATTGCATAcattgtacatgttt ttttgataacaacaaactatataaaaacataaggcttcgatggccaaaat atcctTTACTTTctctaaaacatccaatttcataggaaaatagactaaaa tattcacaaaatggtgtaAATAAGAAGACACGTTAAAGAAcatttgaaaa gtaaaaaaacctAAGAGCGTCCAAAGGCTTCCAAAGATTTTTATGTTCTG TGTTAATGTGCCGGTGCGTGACAGAGCTAATTTTGAAACCATACGACGGG TCAGTAAACTTCATCGATTGTGGATGATCACTTTTTGAGTAAAATGTTTT GCTCCACCTTTTACAGTCACCTTTCACGATTATCTTTCTGGTATATTTAT TGTCAAAAGCCTGtaaatcaaattttcaagatAGAAAAAGGTCGCTTGTG TCATTACAATAAAGGAAAAGCTTCCCTCCTCCCATGCACTTGACGAGAAA AGTGCCATTTTTGACATACAATCATAAAACTAGTTAGCAACTAACGATAA TGCATCAATCACTACGTGAAATCTTTCATCCTTTTCCATAAGACGTGTCA AAATTATGAATATAAAAGCACATAAGATGAATGCAAAAAGCATAACTGTC CTGTCGTAGTCAAAAGGACAAGGATATTTTCGAATATTCAAAGGACTCAC GATGCAGATCTTTATCTTTTCGTTGATTGCTTCGATCGCATACACTCAAG GTGAGATCTAAATTGACTTTCCAAACCATCTAAATTGAACCGTTGGACCT TTTCAGTGaaatatatttcttgaaaatgaaacTGTTAATGTTAGATGAAT TAAGAAACGTTGCGAGCTTTGTAATACATCGTcactttaatatttttcaa ggTTATCACATCAAAGGTCCACAAAAAGACCATAAGGAGATAAGTGAGTG ATTATGATTTTTGTCTTTTCCCTTATGAAGCATTATATTATGAAGCCCAT TATCCTATTCAATAATCCCcctttttttgctaaaaatttgaaaaaacccg GAAGCAAACTGACTTTTGAACAAGAATGCCCTTTGAGGGAGTGCTTCAGA GTCCGGTATTCCGGTATTCCGGTTATGAGTAGAAAAATTACCGGTATTCC AGTATTTAAGATGCCTGCCGGTACCGGTATTTACAGAGATATATACTGGT ATTTCAGTGAAGGATTAGAAAATGACCGGTATTCTGGTATTTTGTACCCT CGGAAGCCCCCCACCTTTGACTTTCACAATTGCACCTTTCTGGCAGAAAC ATAAGACGGGGATAATGGCAATATAACCCTTGTCTCGTACTTCAGCTCGA GGAAGTCAAaggcaaaaaataaataaataacaaaacatttttgttcAATC AAGGTTACGATGAACCAATGCCCGAAGAAGATGCACAATATGATGAAGAA ATGTACCATGATGGTCCAAGTGAgtcttttcaaatatttttgtattttgt attttttgtattCAACATATAGAGTATCGCTCGGTAGATTAGGACGGACC AATGTCATATACAACTCTTGTCTTGTACTTCAACACGAAGAAggtcaaaa aataaataagaaaaactttattgttCAAGGTTACGATGGACCGGTGCCCG AAGGAGCTCCACAATATGATGAAGAAATGTACCAAGATGGTTTGAGTGAG TAGTTTTGATATTTCCTTTGACGACAAGGAAGTGATTGAAAGTGAGGCTA AGTCTTGCTTTCCATGGGTTTCAAAATGTTATCACCAGTCCAAACGCTGA GTCTAAAATGTCTGGAATTATTTTGGGATTGGAgattgatttcttttgtt tacaaaGAGTTGAAATTATAATCGTAATTTCTTCTTTAGGCTGCAAGGAT AAATATTCAAATTGTCCAACTTCTTTGCGTCAATATTGCGAAAGTCACAG TTTTGTGAAGACGGATTGGTGTCGGAAAACATGTGGTGATTGCTCACCAG ACCCAGCTCCTGGTAAGATATAATCGAAATCAATATATTAGTAGTAGAAC CtctttttagactttttataaatttaaaaaaataaaatttaaccaTCATG CTTTGCTGCAAGGTAGTTGTTTTGAGAACATTCATTATCGTTAAGACTCA ATGTAGACCAGTTAGACTTAGCTCAAAAAATGGGATAAATATTCAATACT TTTTATACTATTACTTTTCACAGCTTATGTGACAGCTGAACCGAAAATTT CAAGCTCAGAGATGGAAAGCATCAAAGGTATGACTTTCAGTGAATTCCTG AACGctggtaaaaaaattaatctcGTTGGAGTGGCTATAAATGAACAAAA TATTATAGTAAAGAAGTTACAAgacaaaagaagaaagaaaccAAATATCA CTAATTGTGaatgttcaattgttttacaagtttgttttggacacgtgatt ttaattgttctctttataTAATGACACGTGTTTCGCGCAATGTTTAAATT TTACTACTGTTATCTCCCTTTAAATGNAATGACACGTGGTACGCGCAATG TTTAAATTTTactactgttatgtccctttaaattttTGTTAAGCTACAGt tattcttattttcttgtttatCATAAAAGCAACTTGCTTGGCAGCTCACA ATGCAAAACGAGCACTCCACAGAGACACATCCTCAATGACTTATGACATG GACCTCGCGAAACGTGCTCAAACCTACGCAGAATATCTCCTGGAATTCAA GCAGTGGAAACACGACGACTTTCGAACATATAATGGCTACGAAACTGGAG TTGGTGAAAACCTTTATTGGTCGTCTTCAGCAAGTGGAGCCTCTACTAAC GCTGTTACTTCTTGGTAAGATTACTAAGATTAATAAAACTCAATAATTCG AGAAGGATTCTCatctatataataataatagtaGATATACGTATTTGAAC ACTTTCTCTGCGTGTTTTGATGTTTGCTAGCGATTTCAGATTTCCGTAAT TCTTTTTCCCGGGGATATAATTTGCATCAACATTTTTTAGCATAAACCCA GATGATACATATTGGTGATTTTTGTTTCCTGAATATTGTCTATgactttt aaagattttaacaaTAGGCTGCGGAAAACCTACGAATTCCTCTACATTGA ATATTGAGTGATCCGTAATCTTTCTAAATTTGTGGTATTTTAAAGGATTT AGCCCCTTGAAACACAATGCTAAAAACAGTTGCCATGAAAACATTCTTTG ATTTGATCTAGGTACGACGAAATCAAGAACTACAATTATGAAACCGGCAA GTCAAACGGTGGAGATATTGGTCATTTCACACAATTAGTTTGGGATTCTT CAACTAAATTGGGTTGCGGTGTTGCTAAAGGAACAGGTGGAACTTACGTC GTTTCCAGATATTTACCCGCCGGCAACACACAAGACCAGTACACACAGCA TGTTCATGAGTTAATCGCGAAAAAAGATCAACAAGACGATGCTGTAGAAG AAAAAGTTTTATAAGCCAGGATTTCCAACACAAATATTCAAGATGCTGAA AATTTGGTTACATCGTAGAATTAATAGTATTTCCCATGAAATAACgtaaa aattataataaacCCTTTGTTATTTTGCACACATATATCTTCAATTTGCT TAAAATATCGTCacttatttattttattggCTGCTTTACAGATGTAAAAT TTAAACCTTCCTTTATTTGAAACATGCACTTTCAAGGAAATGACATCCGA CATGACCTTTCGTATTTGTACATCTTAaattaacaagtgatacttttatg gacctacctggttatgcatttaacacatatataattgatatctacgtgac gtgaccattaaacaatcattcagaacacAAATAGTGACGATTTATTAAGA TTAGTCCtttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061855TCONS_00061855Clytia hemisphaericatranscript
TCONS_00061856TCONS_00061856Clytia hemisphaericatranscript
TCONS_00061857TCONS_00061857Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061855-proteinTCONS_00061855-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:91370..97930 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2 0.07 0 0.13 1.73 1.37 1.58 2.12 42.64 38.55 22.29 54.23 110.78 109.6 0.07 0.17 35.64 30.25 141.57 221.85 11 11.4 14.36 18.82 10.84 15.61 3.76 4.09 0.13 0.18