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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061728 ID=TCONS_00061728|Name=TCONS_00061728|organism=Clytia hemisphaerica|type=transcript|length=1015bp
ACTCCACTTTTAAAGAATCAGATACTGTTGCAACTCGTTGCCTTGTCTTT
TATGTGCGTGGTATATCAGCAGATCTTAAGTTCAGCTTCGCTTACCTTGC
CACTGTTGGTGCCACGGGCTCTCAATTGATGTTACTTTTTTGGAGAGCTG
TCTCCGTACTAGAGCTGACTTGCAAGCTAAGAGTAATTTTCACTGTGTCA
AGACAAGAGATTTGTGGAACGGAAATCCAATTTTATGGAATCAGATTGTG
CATGTGGTTCAAGATGACATGTATCGCAGTTTGAAGTTGCTGCCAAAATT
ATATCTGGCACACATCAACCTAGCTTCATACTTTTCAATGACTGTCAGTC
TTGCAACACAGGTTTTCAAAAATGGCAAGTGTCATCTATCGCTACTACCC
TGAGTACAAAACCACAGCTGAcctgattgtttttttttattgttttaaca
TCAGGTCTCAGGAGGAgggaaaattgaaaagaaaaatctttttagaacCA
TTCCGAGATTAAAATGACTGAAGACTAGATTGGCTCCAAAACGTTTTTTT
GGGTTATTTTGATAGTTGGAAGAGGAAGGTCTACCCAATAACAGATAAGA
CTGATAAGGAAAAGGAGAGAATGTTTATTCCTTATAAAACCTATGAAGGT
ATATGTATAAATGTTAGCTCACTTGTTGAATCAGTTAAATTCCTCTTAAA
AAGTGGTGCTGAATTTGTACTGACAGAGATGTTTTGTCAAGATGTTTTAG
AAGAATATTTTGGTCGTCAAAGATGTATTTCTGGCTTCAATACAACACCA
AGTGTTTTTCAGTTTGGGTACAATGCAAATGCTCTCCGTGTTCAAAGATT
CATAACACCCACTCGAACTGGCAATACCAAAGATGTTCACAGAGGAAAAC
GGATGCCGTCTTGGACAGTTGTTGACAGCTGACCACTGAAAAAAAAGCGA
ACAAACCAGATTGGTGCAAATGAAGAAGATGCAAATGAGGAATAAATTTG
AATAGAGGATAGTTG Run BLAST on NCBI protein sequence of TCONS_00061728-protein >TCONS_00061728-protein ID=TCONS_00061728-protein|Name=TCONS_00061728-protein|organism=Clytia hemisphaerica|type=polypeptide|length=103bp
MFIPYKTYEGICINVSSLVESVKFLLKSGAEFVLTEMFCQDVLEEYFGRQ
RCISGFNTTPSVFQFGYNANALRVQRFITPTRTGNTKDVHRGKRMPSWTV
VDS Run BLAST on NCBI transcript from alignment at scaffold_36:555542..556556 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061728 ID=TCONS_00061728|Name=TCONS_00061728|organism=Clytia hemisphaerica|type=transcript|length=1015bp|location=Sequence derived from alignment at scaffold_36:555542..556556 (Clytia hemisphaerica)
CAACTATCCTCTATTCAAATTTATTCCTCATTTGCATCTTCTTCATTTGC
ACCAATCTGGTTTGTTCGCTTTTTTTTCAGTGGTCAGCTGTCAACAACTG
TCCAAGACGGCATCCGTTTTCCTCTGTGAACATCTTTGGTATTGCCAGTT
CGAGTGGGTGTTATGAATCTTTGAACACGGAGAGCATTTGCATTGTACCC
AAACTGAAAAACACTTGGTGTTGTATTGAAGCCAGAAATACATCTTTGAC
GACCAAAATATTCTTCTAAAACATCTTGACAAAACATCTCTGTCAGTACA
AATTCAGCACCACTTTTTAAGAGGAATTTAACTGATTCAACAAGTGAGCT
AACATTTATACATATACCTTCATAGGTTTTATAAGGAATAAACATTCTCT
CCTTTTCCTTATCAGTCTTATCTGTTATTGGGTAGACCTTCCTCTTCCAA
CTATCAAAATAACCCAAAAAAACGTTTTGGAGCCAATCTAGTCTTCAGTC
ATTTTAATCTCGGAATGgttctaaaaagatttttcttttcaattttcccT
CCTCCTGAGACCTGAtgttaaaacaataaaaaaaaacaatcaggTCAGCT
GTGGTTTTGTACTCAGGGTAGTAGCGATAGATGACACTTGCCATTTTTGA
AAACCTGTGTTGCAAGACTGACAGTCATTGAAAAGTATGAAGCTAGGTTG
ATGTGTGCCAGATATAATTTTGGCAGCAACTTCAAACTGCGATACATGTC
ATCTTGAACCACATGCACAATCTGATTCCATAAAATTGGATTTCCGTTCC
ACAAATCTCTTGTCTTGACACAGTGAAAATTACTCTTAGCTTGCAAGTCA
GCTCTAGTACGGAGACAGCTCTCCAAAAAAGTAACATCAATTGAGAGCCC
GTGGCACCAACAGTGGCAAGGTAAGCGAAGCTGAACTTAAGATCTGCTGA
TATACCACGCACATAAAAGACAAGGCAACGAGTTGCAACAGTATCTGATT
CTTTAAAAGTGGAGT Coding sequence (CDS) from alignment at scaffold_36:555542..556556 >TCONS_00061728 ID=TCONS_00061728|Name=TCONS_00061728|organism=Clytia hemisphaerica|type=CDS|length=312bp|location=Sequence derived from alignment at scaffold_36:555542..556556 (Clytia hemisphaerica)
TCAGCTGTCAACAACTGTCCAAGACGGCATCCGTTTTCCTCTGTGAACAT
CTTTGGTATTGCCAGTTCGAGTGGGTGTTATGAATCTTTGAACACGGAGA
GCATTTGCATTGTACCCAAACTGAAAAACACTTGGTGTTGTATTGAAGCC
AGAAATACATCTTTGACGACCAAAATATTCTTCTAAAACATCTTGACAAA
ACATCTCTGTCAGTACAAATTCAGCACCACTTTTTAAGAGGAATTTAACT
GATTCAACAAGTGAGCTAACATTTATACATATACCTTCATAGGTTTTATA
AGGAATAAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061728-exon-scaffold_36-1491911889:555542..556556 | TCONS_00061728-exon-scaffold_36-1491911889:555542..556556 | Clytia hemisphaerica | exon |
| TCONS_00061728-exon-scaffold_36-1510915933:555542..556556 | TCONS_00061728-exon-scaffold_36-1510915933:555542..556556 | Clytia hemisphaerica | exon |
| TCONS_00061728-exon-scaffold_36-1575043694:555542..556556 | TCONS_00061728-exon-scaffold_36-1575043694:555542..556556 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:555542..556556 . |
Blast
The following BLAST results are available for this feature:
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