TCONS_00061306 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061306
Unique NameTCONS_00061306
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2365

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061306 ID=TCONS_00061306|Name=TCONS_00061306|organism=Clytia hemisphaerica|type=transcript|length=2365bp
gaaataataaacttctttcttctttttgactcagactactctaacagaaa
acttcctttcatgaagaccaaatttcataaactgtgcttgaaaaaaatct
acaatatatatatttagGAGATGGATGAATGGCATGGTGGTATGTATGTT
GTCTCTTTAGTTCCCACAATTCtcttgtttgtttgttggtgAAAATCCTC
TCCGCTGTAATGTGCGTCAAGCATtgtctaaaggccggtctccacttgcg
cgcgctgcgaccgcattttttggcttaaatccttttttacttaaaaaaaa
gaatacgtcataaaaatgtagcgcgcgctcgaaaaaaaagttttttcaac
cgttacgtcagatcgcgccaatggaattgcttcatttttcttttgaccaa
tagcgtggaagctttgctcgaaaaagtgcgatcgaagctcACGCAAATGG
AGACCTGCCTTAAGTATACAATAGTGCGAGGATCAATATGTTATACGttt
ggtaagtttttttttgcggaactaatttttgcggttgaCACCCACTTTTT
GTCGAAATTCTCTTAAAAGTTTTGGAGAATTTATAGCAAAAAATGCATTT
CGCAGAACTTATTTCCGTGGTAGACACCTCAAAACGCGAAACTTAGTTCC
CTCAAGGTAAAATATTCCAAACTTGGTCTGGTATTTTTTAACCAATCGCC
GAACCCTTCTGTTCATACATAATTTGTTCAAGAAACCTATTCATGATAAT
GCACCTCTGCAATTTCTTCTGTTATCTCATCACCTGATTGGTTTGGGTAG
GAtacgaaaaaagtttttttattacgTGAGATGATACACCTTTTCCCGGT
TAGCCGTTTCGTATAAAAAGGAAACATACTCTgcacatttttttgtttgt
gtttttgcTTTTAGGCAATGGaatggtttgtttactcgaagttttggtga
ctttttatacgaagcAGCTAGCCATAAAAAGGTGTATTACAGTGGTGCAT
CATATCATGATTACAAACTtctgaatgagatgcctttagtatgaatagat
agaaattgtcagtagCCAAAAGCTGGGAAGGGtagttttagagatatcaa
tctcatcaattattctattgtccttacattgtcaaaatgacttattgtga
caaaataatgatctgatgatcaaatataaagcttcttaaatgaatttcaa
caaaaaatttgccactaatcaatttgatgccgaaaatacaaaaggataga
aattggcACCCcattcaagctccaagagcgttgaaatggctgttctacac
gttttgcacgtggctttataattactgtaggtgagacaggggtgagcttt
actattcaattcgataaataaatgatcatagGAGAAAGACTCTAaggtgg
agaaagaggaaaaactcgataacccaaactTATCTGGTcaccggtcgtgg
tcgctggtcgtggtcgccatttctggtcgatgtttagaaactccgaTTAT
TCGCACGCCGCCCCCTGTTTTTTTTACCCCGCCCAAATTAAAAACTCAAG
ATTGGTATTGGGACCAGTACGCCTATCTCGGTGCAATTTTTCAGGATCTA
TTTCAGCGATTACAGATTATATATTTCTGGTGATAATAGCCCTTGGTTTA
CTGAAAACATTCCAAATAGCCCTCACTAAGTTCAGGctattttgatatgt
tttcaatgaacctcgggacTATTAttcccaaatcaccctccaaaccatgt
tattactagtacaaattaaATTGTACCAAGGACGAATCAATGCAATACAG
TTTTATGTATTAAATGCGATAAAAAGTGTCAGTGTcaagaaaattacaaa
agaaaacTAATAGCTGTTTTTGATATAACGATTCAAACATATTTTGCCCA
GGTTTCAAAGGGTCATATACCCTGGACGAACAGCTTGTATAGAATGCAAC
CTCGACCTTTATCCAAAACAGGTAAACTTCCCACTATGCACGTTAGCAGA
AACACCTCGGTTACCGGAACATTGTATCGAATATATCAAAATAGTTGTCC
GGCCAAAAGAATTCCCCTTTGGTGgTGGTGTGAACATAGATGGGGACAAC
CCTGACCACATCGCTTGGATTTGCCAACGTGCATCTGAGCGAGCGCAACA
GTACGGTATCGAAGGCGTAAACTATCGCTTGACACAGGGTGTTATCAAAA
ATATCATCCCAGCGGTCGTCTCAACTAATGCAGTAATTGCAGCAATGTGT
GTCACCGAAGTCTTCAAAGCTATCACTTGTTGCTACAAAACCATGGAGAA
TTACACGGTGTTTAACAATTCACAGGGCGTTTATACGTACACTTTCGAAG
CAGAGAAGAAGGTAT
Run BLAST on NCBI

transcript from alignment at scaffold_355:348151..366929-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061306 ID=TCONS_00061306|Name=TCONS_00061306|organism=Clytia hemisphaerica|type=transcript|length=18779bp|location=Sequence derived from alignment at scaffold_355:348151..366929- (Clytia hemisphaerica)
GAAATAATAAACTTCTTTCTTCTTTTTGACTCAGACTACTCTAACAGAAA
ACTTCCTTTCATGAAGACCAAATTTCATAAACTGTGCTTGAAAAAAATCT
ACAATATATATGTAAGCCACCCTTCTTAAACTATCCCCCCTTTCTTGCTA
TTCCACCCCCTTTTTCATGAAAATTTCTGATCCCCCTTTCACTTTTCACC
CCCGAACTATGTATAGTTTTGAATAAGACAAGATAAAGCTTCTGGTATTC
TTATTCGTCAGAAGTAGATATCCTTTCCATGGAAACTGTTGGGTGATATG
AGCTCACCATTGAAATAAATGGTTCTCTCGAAGAGTCTTACGTTTTCAGC
CATCCTTCGCAAGTTTTCCATTTCATGATATTTTTGACTGTTCAAAAACA
TACCGACGTCAGTACGATCAAGACAAGATTTGACGTTAAATTGTGTGTTT
TAGTCAGAGAGTTGTTTTGTTGTGCGCAGATATGTAATTTTTGCGCAGGT
ATGTAATTTCTGCGCAGATATGTAATTAGTTTGCGCAGATATGTAATTTC
TGCGCAAATATGTAATTATTTTGCGCAACTATGTAATTTCGAGCTGCGCA
GATATGTAATTAAATTTTTGCGCAGATATGTAAAACNNNNNNNNNNNNNN
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CGCAAAATAATTACATATCTGCGCAGAAATTACATATCTGCGCAAAAATT
ACATATCTGCGCATAACAGTTTTAATACAATTTTTTGTCACGGGACCCCA
GGCTTGCCCCTACTAAAAAGAATAGATATCTTTAATTTGAAATCTAAATT
AAAGTTAGGAATTTTACGCATAGGGCTTTGCCGAATATTTATGAAAAAGA
GTGACTCATTTTTGTTCATTTTCTTTTTCAGATTTAGGAGATGGATGAAT
GGCATGGTGGTATGTATGTTGTCTCTTTAGTTCCCACAATTCTCTTGTTT
GTTTGTTGGTGAAAATCCTCTCCGCTGTAATGTGCGTCAAGCATTGTCTA
AAGGCCGGTCTCCACTTGCGCGCGCTGCGACCGCATTTTTTGGCTTAAAT
CCTTTTTTACTTAAAAAAAAGAATACGTCATAAAAATGTAGCGCGCGCTC
GAAAAAAAAGTTTTTTCAACCGTTACGTCAGATCGCGCCAATGGAATTGC
TTCATTTTTCTTTTGACCAATAGCGTGGAAGCTTTGCTCGAAAAAGTGCG
ATCGAAGCTCACGCAAATGGAGACCTGCCTTAAGTATACAATAGTGCGAG
GATCAATATGTTATACGTTTGGTAAGTTTTTTTTTGCGGAACTAATTTTT
GCGGTTGACACCCACTTTTTGTCGAAATTCTCTTAAAAGTTTTGGAGAAT
TTATAGCAAAAAATGCATTTCGCAGAACTTATTTCCGTGGTAGACACCTC
AAAACGCGAAACTTAGTTCCCTCAAGGTAAAATATTCCAAACTTGGTCTG
GTATTTTTTAACCAATCGCCGAACCCTTCTGTTCATACATAATTTGTTCA
AGAAACCTATTCATGATAATGCACCTCTGCAATTTCTTCTGTTATCTCAT
CACCTGATTGGTTTGGGTAGGATACGAAAAAAGTTTTTTTATTACGTGAG
ATGATACACCTTTTCCCGGTTAGCCGTTTCGTATAAAAAGGAAACATACT
CTGCACATTTTTTTGTTTGTGTTTTTGCTTTTAGGCAATGGAATGGTTTG
TTTACTCGAAGTTTTGGTGACTTTTTATACGAAGCAGCTAGCCATAAAAA
GGTGTATTACAGTGGTGCATCATATCATGATTACAAACTTCTGAATGAGA
TGCCTTTAGTATGAATAGATAGAAATTGTCAGTAGCCAAAAGCTGGGAAG
GGTAGTTTTAGAGATATCAATCTCATCAATTATTCTATTGTCCTTACATT
GTCAAAATGACTTATTGTGACAAAATAATGATCTGATGATCAAATATAAA
GCTTCTTAAATGAATTTCAACAAAAAATTTGCCACTAATCAATTTGATGC
CGAAAATACAAAAGGATAGAAATTGGCACCCCATTCAAGCTCCAAGAGCG
TTGAAATGGCTGTTCTACACGTTTTGCACGTGGCTTTATAATTACTGTAG
GTGAGACAGGGGTGAGCTTTACTATTCAATTCGATAAATAAATGATCATA
GGAGAAAGACTCTAAGGTGGAGAAAGAGGAAAAACTCGATAACCCAAACT
TATCTGGTCACCGGTCGTGGTCGCTGGTCGTGGTCGCCATTTCTGGTCGA
TGTTTAGAAACTCCGATTATTCGCACGCCGCCCCCTGTTTTTTTTACCCC
GCCCAAATTAAAAACTCAAGATTGGTATTGGGACCAGTACGCCTATCTCG
GTGCAATTTTTCAGGATCTATTTCAGCGATTACAGATTATATATTTCTGG
TGATAATAGCCCTTGGTTTACTGAAAACATTCCAAATAGCCCTCACTAAG
TTCAGGCTATTTTGATATGTTTTCAATGAACCTCGGGACTATTATTCCCA
AATCACCCTCCAAACCATGTTATTACTAGTACAAATTAAATTGTACCAAG
GACGAATCAATGCAATACAGTTTTATGTATTAAATGCGATAAAAAGTGTC
AGTGTCAAGAAAATTACAAAAGAAAACTAATAGCTGTTTTTGATATAACG
ATTCAAACATATTTTGCCCAGGTTTCAAAGGGTCATATACCCTGGACGAA
CAGCTTGTATAGAATGCAACCTCGACCTTTATCCAAAACAGGTGAGAGGT
TTTCTCCGTGTAGTTCTGTGCTCCCAATTTTCCCTGATTTTACTAACTAA
CTAAATCTTTGTTAAGTTTATATCATCTTCAACACTTTTGTAATTTTGTC
TCTTCAAAATTTCAACATTTATTCCCCAGCAAATAAGAATCCTTTCGATT
GATAAGCGGGATATATTATTGATTCGGTTTGTATTCTTAAACAAAAGGGA
ATAGTCTTTAGGTAGCTTAGGGTTTTGTCTCACTAGTATAACAAGCTGCT
AACAAGCTGCTTCTAAAGTAATAATAAACATTTAAGTCTTCCGGACAGCT
GTCCTCCGTCTTATGGCTACGAAAGAGGTTTTGATTGTTTTGTCTGATCA
GAGCATCACTTTCACCTTTTAGAGCAGAGCAGAGCGTGTCGTGTGATGAT
TGGATGATTGAAATTCCTTATTCTTGTATTTTGAATTGTATATTGTTTCG
TTTTAAGGTAAACTTCCCACTATGCACGTTAGCAGAAACACCTCGGTTAC
CGGAACATTGTATCGAATATATCAAAATAGTTGTCCGGCCAAAAGAATTC
CCCTTTGGTGGTAAGCTTCTTTGATATTAGTCAGTTTGGCCTATTCAAAG
CGAAATGATACTTCATAGTGAGGAGAGGTTAAACTTCATAGAACGGGCTC
AATTATTTCTGTTTCCCAGTGGCATGCTCTCCGAATAGGTAGATTTGGGT
ATACACGAACACTCTGGGAAGCGGGGTTAATAGATATCTTACATATAGAT
GTATAAACCAAGATAGATCTACTCTGTTTTCCTTATAAATGGCAGTTGAA
GCAAAATAACCTGCCTTCTTTGCTGAAAGTAGATCATAGCTCAAGTAAAC
AAATAAACGCGAAGCGTCGAGGCGAGAGAATGCAATGGACTTAATTATTC
ATATTACCGGCACTAAACTATGTTCTACTTATTAAAGATGGTGGATTATT
TTGCTCCAGCTAGGGACGGGGAAGCTCTTTCTAGTGTTTTATATAAGATA
TCTGTGGGTTCTCTCAATGAAATTACTCAACGAGACCGACAGATTAACTT
ATCGCATGTGTCTCTCTATCCTTCAAAAGTTCATTTTCTCAAAATTTAAG
GTGGTGTGAACATAGATGGGGACAACCCTGACCACATCGCTTGGATTTGC
CAACGTGCATCTGAGCGAGCGCAACAGTACGGTATCGAAGGCGTAAACTA
TCGCTTGACACAGGGTGTTATCAAAAATATCATCCCAGCGGTCGTCTCAA
CTAATGCAGTAATTGCAGGTACTTATTTTCTTCAGTGTGACCGCTGGCAG
TATAGACCTTTGCATAAATTACGTTACGAACATCACTTGCCTCGTTTTGA
AATTATTGCCATGTTGATTAACTCCCAGCGGATTTAATTAAAGCTACTTT
CTATTCATAAAAAAATCATTTGATGTCTCAAGGGACATAATCACCATGGC
AATTTTTTGAATACGAGGCAAGTGATGTTTGTGACGTAATTTATGAAAAG
GTTTGTTAATTTGACCCCACCCTTCCCGATTAAGAGGGATTGGTTTATAC
TCATCCCTACAATCCTGGCCAAAATATATTGAGAATTTAGCTTATTTCCT
CGTTTTTCAAAATTTGGAATTCGGGCGAGAAAGTCGTTTTTGGGCTAATT
GATAAATTTATTCGAGTATTTCGTTTTGGGTGGGGTTAATTGACTTCCAG
GCTATATTCTGAGCCCTGTTGGACCATTCTGGGACTTTTGAATCCTCAGA
GTCTTAAGTCTAATGTTAAAACTCAGAGTTAAAACTCTATTCGTCTAACC
TAATTTAGAGCGCTTCCAAAATACTTGTGGTTATAAGATTTCGTGGGAAT
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NNNNNNNNNNNNTGCTGGACGTGAGTAAATCCTTCGGTCCGGATGATATA
CACCCGAAAATGTTAGTTGAACTGATTGACCATCTAGCCGAACCCCTGTC
TATCATCATGAATAAGAACTTATCTGACCTGAGGGAACAATACCAAAAGA
TTCGAAGATGGCACATGTGACTCCAATTTATAAAAACAAGGGTGCCCAAA
ACCTTGCGATAAATTACAGACCTGTTAGTTAGACTTCAGTAGTCTGTAAG
TTAATGGAATCATTTATAAGAAAGCACATTATGAAGCATCTAACTGACGA
AAAGCTTCTAACCAACAAGCAATACGGCTTCATTAGTCGCCGCTCCACCG
TCACACAACTCCTAAATTATTTGGACAAGTGCTGTGAAAGTATAGCTAAC
GGAAGTGTTGTTGACACTATATATTTCGATTTNNNNNNNNNNNNNNNNNN
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NNNNNNNNGATACCAAACTTTGCAGACGATGGATTTAGAGGTGTCCAGAC
CAAGTCGTTTTACTATCGATGTGTGACAGCATGGAACCAGCTACCAAAAG
AGACTGTTAACTGTTATCCCGTAACAATTATCGTACTATCATATAACGCC
TATACTACTGTATTACACGCATTATAAACGACTCCAGTCTAGCTAATACG
AAAAGCTGTACCATTGAAAAGAGGCCCGGAATCTTCGAGTTAGCGATTTT
CGAGTTAGGAATTTTCGAGTTAGCTAAATTATGACGTCATAAAAGTGCAA
ATTATGACGTCACTCGACTCTAACTCGATTTTTTATTTTCAAAAAATATT
TTTCGAGCTAAAATTAACTCGAATTTTATTTTTCGAAAAAACCTTTTCGA
GTTAGCTAACTCGGAATTTATTATTTTAATTTTTTTTTGTATGGTAGTAG
GTAAATCAAAAAAAATTCGAATGGTTTTATTCAAAATTCGAATGTTTTTA
TTCATAATTCGAATGTTTTTATTCGAAATTCGAGTGTTAGTTTGGAAATT
CGAATTCTTAGCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCTAACTCGAAAACTTGTGAA
CGAAAAATAAATTCCGAGTTAGCTAACTCGAAAAAAGGTTTTGTGAAAAA
GAAATTCGAGTTAGCTAACTCGAAAAGTTTTCTTCGAAAAATAATAATCC
TTTTTTGTAAATGACAAAATCGAGTTAGAGTCGAGTGACGTCATAATTTG
CACTTTTATGACGTCATAATTTAGCTAACTCGAAAATTTCTAACTCGAAA
ATTCCTAAATCGAAGATTCCGGGCCTCCCATTGAAAATTTCCCAACGTCT
TTAGTTTCGCTTTCATATCAACGAAGCATGTTCAATGGGAAATTCCAATT
GGACATTCCTCCTCTCAAATTTTATTGATAAACACAAAACATAATGCCAT
TTTTTTTAAATCGCTTGATCGATCATAGAAAGATGAGATAGGGAATACTA
CCGTAAGAGAGAAAGTTGGTGTTGTGTGTTTTTATTTTGAAAAACAAGGA
AGATGGCGAGTTCTATTGGTGTCCAAACTATCGTACAGAAATTATCTATG
CTGCAACCAAAACCAATTGATCCTACAAAATGTGATCCAAATAAATCATT
GTATTGGCAGATCATCAGGAACAACCAAACTGTATCGAATCGTCAAGCCA
AACAATTCAATTTGGGGAACACCCTTACGTTTAATGACCCGATCAAAGCT
GCCATGTTCCTCCTTCAAAGAGAGTACGGCGATTCTGCACTTTTCAAGAA
CGATGTACACGAGGCTGTCTTCATACCTCCAACGTTTGTTTCACAGCAAT
ACTCAAAGAAATCGACCGTTGCCATTCTGGATTATGAAGTCAAGAAAGAT
ATGGACAGACTCTTGGATAATTTGAAAATACAATCACCAGGTTATTGGTT
GACCAAAGAATTACAAAACTTTATGCAGACACAAAATGATATGAATCGGA
TTGACACGAATGCGTTTGACCAATGGGTTGTAAATCTCAAAATCATGTAC
CTTGTTGTTGTTGTGCTAAAAACTGAGTACGCTAATCTACTTTCTACTAC
TGTATATCAGACCGAGGAAGTTTCATTCAAGCTTGCATCAATGAAATCCC
TTCGACCACACCAGAACCAGCACTGAAGGTTTTTCTGAGAGAATCTCAAG
GCAAAAAGAATTTCAAAAAGCTTCTTAAACAAAAGATCGAGGAGAACCCA
CCACAGGAATCAAACATTCGATGGATCTTCGAATTGGAGTTGTCAGAGTT
GGGAGAGCAACTAGAACATTGGTTTTATAATCAACTTTCACCGTTAAAAG
ATGACATTCTCCAGGACACAGTTATCCTTTCGTCAGTCAATTTTTTAACA
AATGTTCGAAACAAGATGCATAAAGAAGCAGATTTCTTAATCATTTCCTG
GCAAAGAAAACTCATCATTTCCGTAGAGATGAAACGCGAACTCACCAACG
ATCGAGTTTTCGACCAATTGGATTTGAACCATCAATTACTCGAGGAAAGA
TTAGGTGACCAACTTCAACCTGGATGGACATTCTTCCCCGTTGTCTGTGT
CCAAAACAGTTCCATCTCAATCGCTAGTAATCATTTCATCACCATGGAGA
CTGTAATCAAGCCATGGTTGGCGAGCATCCTCGATAATTACCTAATCGTT
CAAATCACTCAAAAACCGACTCCACTCGATCAAGTTCAAAAGCTGTTGAA
TATTATCGTCTTTTCGATTCATGTTTCCAAGAAGGACCTCGTTGCACCCA
TAACCAGCTCAAACTGGGTAGAGTACATCCAAGACGCCATCGAAAATGTT
TCAACTAGTGACAACATTTTGTTTTACTCCAACCAACAGATGGCGGCATT
GAACAACAATGATCCACGTTATAACAGACTGATAATTTCTGGCCCATTTG
GTGTGGGTAAAAGTATTTTGCTGAGAGACAAAGCCATACAATTGAATAAA
CAACCGGAATATAAAGGCAAAGTCATGTATGCACTGGGAGAAAGATATTA
TCATATGCACACCATGCTTTACTTTCGAATGAAGGTCGATTTGGAGGAAA
AGCACGGGATTAAAGTGGAAGAGATAATCGTTCAGGTCAGTGGTTTTTGT
ATATTATTTTTATCCAACTTTCACTGTTAGATTTGAAAGCCATTTTAAGG
AGAAGGACTTTATACAATATATAGCTCTTTATAACGCCATTACCTTTTTT
TCTGGTTAACCTTCCATCTTCACTGTTCAAAATACAGTAAATTCATCTGC
CCAAAATTCGAACGACTTTTCTCTTTAATTGGACATTTTTCTTTTTAGGT
TTACTTATCAAAATGCGTGGACTGCCAATATTTTGGGATAGGCTTTTAAT
TAACTTCATATTAACAATAATATCTATGTTTTCAATCTTTAATAGGAAAC
TAACCACGAGCAACTGATCAAACAAGTTAAACAAGATGGCATCAAAGCCC
TGTTTAGTGATGAGTTTGACACCAAAAACAATGTATCGATGAGGAAAATA
ATGAAGATGGTTGATTTCTTGTGGATCGTTCCTTCGACTGATATTTTGCA
CTACAAAAACTTTCAAGTATGGAAAGACGAATTTAGCTTTCTCCTTCTCT
CGCAGAATTTTCGTAATTCGCGAAAGATCGTAGAAATGACAAAATTTCAA
GCGCTCATTAATGGTTATCAATACAAAGAAGGTATCGTTATGCCACCGTA
TAATTCCCCAGCAGGCTGTGAACCAATATTTGTTGATTCCTTTGGAAATA
CGAAAAAAGAAGCACGAAGACGAACTAAAGATGGAATTTTAGTCATCGAC
GCTAGAAACCATGACAAAATTTACAATCAGATAAGGGGAAAATGGAAAAT
ATACGTTACACATCGAAACGATTTCACAGAACAGGAGAATCCATACAAAT
TTCTTCAAGAGGGGAATGTTTTGATTGTTGATGAGTACACATGTTATGGA
TTTGAATGGATGACAGTCATCTTATTTGAAGGGAAGAGCGATCCATCAGC
AACTTATCATAGCTGTAATGAAATGATGAGATGCAACACAAATCTTACTC
TTGTCATGGAAAAAGATAAGTAAGCCTGGTAGCGAGGATGGTGGACAGTG
ACCTACGAACGCTCATTAAAAACACGGATTACGGATTTTAAGAATGTTAA
TAGTACTTATAAAATTATAAACCTTTATGAGCCTTTTTTACACCGGCCCT
TATCGGTGTAATCTTTTCGTCGCTTGGGTAAAATATGGCCAGCTTAAGGG
ATCGGTATTGAATACACCTTTTCGACCGTAGTCGTGCGGTCAGTTGCTTG
CCACTTTATTATTTAATTGTCCCCCTAAACTCGATCCAACCCTTTATTTC
TATACCTTTTTCTATAGGTGCGAAAAAAAGACTGGGACGGTTTTAGGATG
GTAAAACGTCCGTTGGTAAAACATTCCGGCGCGGCAATTGGTGGCTACAC
GGTCGAAAAGGTGTACACGTTTTTTTTTTTAAGAAACTAGTTTTACCAAG
CAGCCTCAATGTTTCTTAAGAAATCGGCCTTTTTAGCCTTAAATGTTTCT
GACATGTTTCTAAACTTTTTGACATAATCAGCCTATTTTTCATGCAAAGA
TTGGAAGGTTCTAAAAAAACCGTTTTAAAAAGGTTATTTACTCATTCTCA
GCCTCAGCATGTTTCTTAGATGTTTCTTAGTTTTTAGGCATTCTGAGCCT
CATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAAAGACGTGTATTAGAGC
CGGGCCAAAAATGAGCCTTATCGTAATAAGTGACTGGAACGAGTGAAGGG
TATATAAATTTCAACGTATTTTTTTTAACAGTATATCAAACTTTGCAGAT
TAAACTGAGTGAAACAAAAAAGCTTCACATTTGTTTTTTCATAAATAGGT
CAACAAAATTTTCAAAACCCTTGGATGTTCTTAACTTTTGGAGTTCTAAA
CACTGCGTCTTCTAAAGCCTAAAATATTCTACAAATATTCTGACTTTCTC
CATTTAGTGAGTATTTTTGTGCAATCTTCATTTAAATTGGGTGTTTTTAA
TAAAGAGCCCTCAAATCATATAAAATACTCTTAAATTTGTTTTAAATAAT
TTGGCCAACGAAATTTTATGTCCTCAGCTAGTTCTTTAAAAAAACGTGTA
TAATGTCCGAAAAAATATGTTAATTTTAAGTTTAAGATTTAAAACTTTAC
GACACATTTTCTTAAATTTTTATTTGGAATTTTTATTTAAATCATTAGGA
TGATTGAGAATTCCCTAAACAATAGTTATTTAAAACCAGGGCGAAATTTA
ATCGTATTGAAAATATTTACAGAAAGCCCAATAAACAAATGATTTTTTTG
TGCTTCTCCCAAAATTAAATTACTCAGATAGTTGTAAATTCCCTAGCTGG
TATCAAAAATCAAGAATGGTGCTTTCTGATGCCTTCAATTGTTCTTAATT
TTTTTTTAATTGAAATTGGCTTAGTAACGCATAATTTCTAGCATATCCAT
GATGCATCTGAAACCTTAGGTAACACCTAGTAATTTTAGGCAACCCCTTA
TAATTTAGGTAACCCCTTATAATTTAGGCAACCCCTTATAATTTAGGTAA
CCCCTTATAATTTAGGCAACCCCTTATGATTTAGGTGACCCTGAGGGGTC
CAATAAATTTTTCTTCACCTCGAAAGAAAACGTTTTTAAAAAATGCCTGA
AAAAATCAATTAGTCTGTTGAATTAGCGGATTTCTTAGGCGGGAAATTTT
TTAAGTCAAATTAAATGCCAAAAAAGTCAAAATGTTTTTACACCTTTTTT
CTACTTATTTACCCCTTCGATATCCCCTGGTCATTACGTAGTCAAATTAA
AGTCGAAAGGTCAAATGAAGGTGGAAAAGTCAAAATGTTTTTACACCTTT
TGTTCTACTGATTTGCATCTTGGATATCCCCTGGTCATTACGTAGACATC
TCAGCTGACCCCTTCGAAATTTATGAACATAATTCAAATGCAAAATGGAA
AAGTGTAGTTGTTGTGTATTTCATTTTGCGCTGTAGGCCAGAGTTATCTT
GTACACAGTCTAGAATTAATAAAAACAACACAACTTAGAGATTTCAAAAA
AAAGTGACCCCTACATCAATTGCCCCCTGGATCAAACAAGGTGCCAGTTG
TCGCTTGACCTTTAATCCCCCACTCCAGACAAGCAGGACGGTGGTCCAGC
CATATAACACTAAACCGATACGACGTTCTTGCTTCAATAAAAATTACGTA
TCCCGGAATTATCCACGTATGTATGAGTTAAGTTGGGTTACTCTGTACCA
GAGTGTATCTCACGTTTATCGCTATTGCCTCTACGGCAATGAATTTCGAA
ATTAGCCGTAGACACTGGGTCTGTGTACAGACAAGGTTGGGTGGTCTCAG
CCAAAGAGATTTTGCGGAAAATCTAGTTAAGCCTCTTTGTCTCATTCTCG
TTTTTCAGCAATGTGTGTCACCGAAGTCTTCAAAGCTATCACTTGGTGAG
ATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGAT
TGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTG
TTTGATTCGAATCATTAATTAATATATAGTTTCGAGATTTGCTAATTCTC
TATTTCGTTATTCTACCCTGCTCTTTCATTTTAGCGACCGTAGTGTAGTA
ATACCGAGTTTATGTATTTGCACTTTTGAGGACGGTAGAGTGACTGAAGC
GATTTGGAAAAACCCGCAATTCCGCCCCGCAAAATCGAGGACGGTAAAAG
TGCTGATTTACCGTCGTCCTCAGCTGGTCAGGATCTTCTCAAATTAGAAC
CTTACCGTCTCCGCCGCTGGAAAACACACATACATAAACTCGGTATAAAG
CATCCGGCTACGGTTCGCAAGGTTGTGCGTTCAACCCTCAGCCGGGTCAT
ACCAAAAATTTCCAAAATGGTACTTGATGCCTCTGAAGGGTCAAGGGTAA
GTGGAGCAATCCAGGGAGAAAGAGTGGCGCCCTCCCCTACTTTTGGGTAG
ATAGCTATCGAAAGAGGATCCTTCGGGTCGCCTCCGACTGCGGTCGCAGA
CTTACTTACTTCCGTTACTTACTACTTCATTTTATACACATAGTTGCTAC
AAAACCATGGAGAATTACACGGTGTTTAACAATTCACAGGGCGTTTATAC
GTACACTTTCGAAGCAGAGAAGAAGGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038465XLOC_038465Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061306-exon-scaffold_355-1575043694:366819..366929TCONS_00061306-exon-scaffold_355-1575043694:366819..366929Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1575043694:362139..363998TCONS_00061306-exon-scaffold_355-1575043694:362139..363998Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1575043694:361570..361672TCONS_00061306-exon-scaffold_355-1575043694:361570..361672Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1575043694:360862..361029TCONS_00061306-exon-scaffold_355-1575043694:360862..361029Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1575043694:348885..348921TCONS_00061306-exon-scaffold_355-1575043694:348885..348921Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1575043694:348151..348236TCONS_00061306-exon-scaffold_355-1575043694:348151..348236Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1510915933:366819..366929TCONS_00061306-exon-scaffold_355-1510915933:366819..366929Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1510915933:362139..363998TCONS_00061306-exon-scaffold_355-1510915933:362139..363998Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1510915933:361570..361672TCONS_00061306-exon-scaffold_355-1510915933:361570..361672Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1510915933:360862..361029TCONS_00061306-exon-scaffold_355-1510915933:360862..361029Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1510915933:348885..348921TCONS_00061306-exon-scaffold_355-1510915933:348885..348921Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1510915933:348151..348236TCONS_00061306-exon-scaffold_355-1510915933:348151..348236Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1491911889:366819..366929TCONS_00061306-exon-scaffold_355-1491911889:366819..366929Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1491911889:362139..363998TCONS_00061306-exon-scaffold_355-1491911889:362139..363998Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1491911889:361570..361672TCONS_00061306-exon-scaffold_355-1491911889:361570..361672Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1491911889:360862..361029TCONS_00061306-exon-scaffold_355-1491911889:360862..361029Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1491911889:348885..348921TCONS_00061306-exon-scaffold_355-1491911889:348885..348921Clytia hemisphaericaexon
TCONS_00061306-exon-scaffold_355-1491911889:348151..348236TCONS_00061306-exon-scaffold_355-1491911889:348151..348236Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_355supercontigscaffold_355:348151..366929 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.78861e-08	9.71353e-10	0	6.22481e-06	0	0	0	1.45389	0.823049	0	0.678481	0.806328	1.03867	1.2695	0.209777	5.57761e-10	1.46077e-08	7.02269e-08	0	0	0.828457	0	0	0.000467713	0	3.21217	0.559465	1.21304	0	2.46924e-09
Blast
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BLAST of TCONS_00061306 vs. Swiss-Prot (Human)
Match: UBA3 (NEDD8-activating enzyme E1 catalytic subunit OS=Homo sapiens GN=UBA3 PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 1.386e-63
Identity = 102/151 (67.55%), Postives = 120/151 (79.47%), Query Frame = 1 
Query: 1909 RVIYPGRTACIECNLDLYPKQVNFPLCTLAETPRLPEHCIEYIKIVVRPKEFPFGGGVNIDGDNPDHIAWICQRASERAQQYGIEGVNYRLTQGVIKNIIPAVVSTNAVIAAMCVTEVFKAITCCYKTMENYTVFNNSQGVYTYTFEAEKK 2361
            RVI PG TACIEC L+LYP QVNFP+CT+A  PRLPEHCIEY++++  PKE PFG GV +DGD+P+HI WI Q++ ERA QY I GV YRLTQGV+K IIPAV STNAVIAA+C TEVFK  T  Y  + NY VFN+  G+YTYTFEAE+K
Sbjct:  211 RVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERK 361
The following BLAST results are available for this feature:
BLAST of TCONS_00061306 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBA31.386e-6367.55NEDD8-activating enzyme E1 catalytic subunit OS=Ho... [more]
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