TCONS_00061176 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061176
Unique NameTCONS_00061176
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length550

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061176 ID=TCONS_00061176|Name=TCONS_00061176|organism=Clytia hemisphaerica|type=transcript|length=550bp
GGAGTTTTCATTGTTATCTACCTCAAAATCAAATGATCTCGACTGCGGAT
GGCGGTTATTTGGTGGTCGTGTGGAATATGATATATTTGGAGCACCTAAA
GTATtcgattcaaaatggtagccattCGTCTGAGCTGTATATCTCTGATT
CCGACTCTCATAAGAGTTTTCTCCGTAAAGATTTTCCGCTGACTTCGTTC
GTTTCCCAGCGTAAGGTCGATTTATTATCTGTTCAATATCATTGCTCAAC
TTATTCCGAGTTAAACCAGCCGGTCGACTCGGTAAAACTCGGTCTTTctg
aaaagatattttatagttttttaatatattttcattCGCTCGACCAGGTG
ATTTGATTTGAGGTTGATGCCGCTCTACATCGCTATTATCGTCATCATAC
GAGTACTTTTTTACGTGTCCCAGTCTCTCTCGTAATTCTTTATTATCTTC
TCGCAAACGCTTCAAATTATTCGTAATATCGCTGTCCGtatattttggaa
tatttcgAGCCTCTGTAGTTAATTGTTGATTTTGTTCACGAAGTTTTTTG
Run BLAST on NCBI

transcript from alignment at scaffold_354:596779..610967-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061176 ID=TCONS_00061176|Name=TCONS_00061176|organism=Clytia hemisphaerica|type=transcript|length=14189bp|location=Sequence derived from alignment at scaffold_354:596779..610967- (Clytia hemisphaerica)
GGAGTTTTCATTGTTATCTACCTCAAAATCAAATGATCTCGACTGCGGAT
GGCGGTTATTTGGTGGTCGTGTGGAATATGATATATTTGGAGCACCTAAA
GTATTCGATTCAAAATGGTAGCCATTCGTCTGAGCTGTATATCTCTGATT
CCGACTCTCATAAGAGTTTTCTCCGTAAAGATTTTCCGCTGACTTCGTTC
GTTTCCCAGCGTAAGGTCGATTTATTATCTGTTCAATATCATTGCTCAAC
TTATTCCGAGTTAAACCAGCCGGTCGACTCGGTAAAACTCGGTCTTTCTG
AAAAGATATTTTATAGTTTTTTAATATATTTTCATTCGCTCGACCAGGTG
ATTTGATTTGAGGTTCATTTGTTCCACCAGGGGATATCACCGTCAACTGA
GTTGGGTCGACTACTCGATCGTCGGTGTTTTTTTCTTGCTGCTTTTTTGG
TTCTCCTCGAGATTTTATGATCTAAAAAAAATATTTGAAGGGCGTTTGTT
ACACATTTTTCTTAAAGGAGCGAGTTGGATTCGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTAGCGCTTATAAGATTTA
CATTTTATTCTAAGACGGCTTTTTCTTCAAGTTTTTCTACCCCTTGTAAC
TCTTTATCTACTTCGTTATCATATGAGTAATTTTCTATGCATCCCAGTCT
TCTACATTCTGACGGAGAACAATATATCAAAGACCCTTTAGTTACACATA
CCTCTTTCATACTTTCCCGCATCTAGATTTACTTTTCCTCGAATAGTTTT
GATGATGTAGCGCCATTACACGTTAATTTTAAACATTGCAATGAGTCTTC
CCAGATACAAATTCCAAAAAAAACTCCGATCAAAGATAGCGGATATAGCT
TGGTCCAGAGATATATAAAGGTCAGTAAATTAACTTTCTGCCATAGTAAC
CTAACTCACAACAAGTTGTTTCAGTTTGTTTTCCAGAGTGTAACTCAAAC
AGAGCGTTCCAGATAGAGTTGAACAGCCCTTTCGATTGACTTCCAAATTT
GCCATACTCACCAACTTTGCCAAATCCACAATTTCAATGTCAAAAGATCA
CAGCTTCATGGCAAATTTGTACATNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCCAA
TTTTGCCAACTTTGCCAAATTTCTGTCAATCGAATGTAAAATAATTGGCA
AACAGGGCAAAATTGGCATATTTTGAAGTCAATCGAATTGGCTGGAAGAT
TGCCATGTCAACCTAGCTGCTCATGTTTTATTCCCAGATTTTAACTAGAA
CACGACCTCTCAAAAGTAAGACTAAACTACCCTTAAATGAGCCCATTATG
TTAAACCTGACCTTGAATACATAATACATCTTAAAGAGCTACCTCGTTCC
CTGCGCATTATCAGCTTTTTGATGCTTACTGATACCGCTAGATAATACCC
TGGCATTGGCTGGTTTTCGAACGCGTAAGATTACGTTATTCAAAAGCAAA
ACGTCAGAAATCATTCGTTCCTGGGTTTGAAACCATTGCATTGCAGTGTA
ACTTTGTAACGTCAGATTTTTTTATGACGTATTGTTTTGAGAAGTTCCCC
CTCTGAGAGGGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTGAGAGGGGG
AACTCGCATCAGCCAACACCAGGGTATTCTCTGGCGTCAATCAGTAACGT
AAATAAAGCCTGGGATACACGGGGACGAGGTTGCTCAAACGTCAGAATTC
AAATATTGGTAAACCAAAAAAAAAAGGTTTCCATTTGAGCACCGTAGCTC
GTACTGCTCGTAGATCTTGATTCAATCGTGTGACTTTTTCTAGTTCATCA
TTGAAGGCGTGGACACGTTCCTCCAGTGTATTTTTCTCTTCCAGCCATTG
GTTTTCTTTTTCCTTGTTCTCCTCATCTTTCTATTATGGAAAACAAAGAT
TTATCATGATTAATTTCCAACCTCATACTTTTTGTTCGTGTCACAGACCC
ACTGGGCCCCGCTGCACTTGAACATTTGCCCACCCCCTCCCGTTAGAAAA
AATATCTTATAATTTTCAGGGAAATTATATTAGATTTCATCCCCACTTAA
AATTCAATGGAAAAAATTGTTCAAAACCATCCCCACTGGATTTATTGAGT
TGGGGAACATAAGAATTTCTAACCGAATTGGGATTTCGATAGAAAATTTC
ATCCCACTTCCACCAGGGCTGTGAGACAGGGATGTGGTTTGCGTGTCTCT
TTTGAGGGATTTCGGCGATGAACCAACTCTCTTGAGTCAAGAAATCGTCA
GATTTTCTCAAGAAATAAGGAAAATAATAAGTAACAATTCCGTTCTTTAT
AAAAATCAAATCAGGATTATTTCCCAATATAATAAGGTCAACCAAGAAAT
TTTGTCCCATTAAAGCAATGAAAGCACAAACTGAAAGCACTAGAACAGAA
TTTAAAAAATTTGCGATAAAACATACTAACCCGTGCATAGATATCTTTAA
ATTGTTGTATTCTAATTTCTTTTTCTGTCAACTCATTTTCATATGCTTTC
ATCTTTTTTTGAAGTTGGTTTTCTCTTTCTGAATGTTGTTGGTGGCGATG
GTCATTCGCTGGTCGTTCGTTTGGCACGACAACTTCCTGCTTAAAATGCA
CCAAAGAAAGACTTTAAGAGACAGAAGAGGCCCTAGATAGGGAAATCACA
GTGCTTACCAGACATTGTACTCTATACCCGTGACACATCAGAGCCGTGCT
GTATCGATAATGATACTCGCAAAGTATGTGTACAGGTACTGAACATATGA
GTAACATCACCACACCTTGTATCAGTGTGATGGTACCCAAATCTCCTCAC
ATGGTATGAGTTAACCCGGGCCAAGGTACATTCACTTGGCAAGTGAATCG
TAGCTCCAATAGTTGATATAAATTGACTATATTATACCGCCAGAAGGAAG
AACCCCAAATAGACCATCGATTTACCTTATTGAGGAAAAAGTGTCGGGGA
AGGTGACGAAAATTTTGAGGGGCTGACGAAATCTTTCAACGACATTTTAT
CACCCGACTTAAATCTATTTTTTTACACCTTTATTTACGGAAATTAGTGC
GAATTACAGGATCCATTTTCGAGTTAGTGAAGGAAACCATTTCATTTGGA
CAATTTAGTCGGGTGAAAGTGACGAATTTGAAATTTTGATCGGGGATTTG
ATTGGTTAAAATAAAAAAAAAAATATTGCAAAAAATCTTCTCGAGGTCAG
GGGACACGAGGGTTTTGTATAATTCTCGATTGCAACATGAAAATTTTGTT
GCTGCAACAAAAACATGATCTAGCGGAAAATGTTGCAAAATAACGATATC
TGATGTGAGGACACAATGAAAGATATCCATGCGATTAATCACGAGAAGAT
TTGTTTCCGTGTCCCCTTAGCTTGAATCATTAGCGTAGACACCTTTGTGA
GAGGGAACATTTTCTAAGGAGGGCAGATTTAAACGACACAGTAATTATGT
TTTTATACCACGAATAGTTAAGTTGTAAAAATCTGCTCTCCTATGCAGAT
CGATCTTCATCCCTGTTTACGCTACTGAAAAGAAAGCTATTTACTTTTCC
CTGGAGGATCTCCAGCTCAGTCAGCCTTTTTTCTTGAAGTTTAAGTTCGG
CCAACAATTTGTCATGGTTTTGTTCATATCTTTTGAGTTTTCCCTCAAAT
TCACGCAATCTTTCATCCTTGTTTTGCAGTTGAATGGTAAAATCTTTCAA
CTTTTCTGTGCCCTCATTCATCTGTTTTACCAATTTCACCAATTCTTGGT
CTTTAGTTTGAAGTTGAACTTGAAGTTGCTTTTGTTCTCCTTCCAACTTG
ATCAATTTTTCATCCTTAAGACGAAACTGTTCTAACGATTCACCATATTT
CACTTCAGTTTTCTTCTTCTGTCTCTTCTATCTGCAACAATTTTTGATCT
TTCAGTTGAAGATTTTTATCTTTTTCTTTCGCTGAGTCTTTCAATTTTTC
TATTTCGTCGATGATTTCTCTTAGCTGTTTCTCCAAGATACCTTTTTCTT
CAAACTCTTTTGATTCTTTTGCATCAAATTCAGATTGGAGTTTTAAAATA
AACTTCTCATTACTTCTCAGTTTCCCTTCCAAAACTGCAATTTTTTCATT
CTTAAGCTCTTTCAATTGGTCTTCGAAGTCAAATCTTAATTTTCGCAATT
CTTTTAGTACTTCAGGATCTGTTTGGTTACCCATTTTTTATTGAACCTAA
AAAAGATAAAATGACAATAATGTTCATCTCCAGACCTTCTTTCGTTTAGC
CCCATCCATCAGGCAATCTCCCGAATGGTAAGTGGGCCTCCGGGGGGAGG
GGTACTCAAATGGCTCGACCCACTACATGTGCCGCCCTTAAGGGTAGGTT
TTTCGAGACCCTCAAAATGCACTGTAAAAGGGTGTAATTTTGATAGAATG
CACTAAAAGGATCTTCTTTTAGCTGGATACACTGTAAGGGTGTGTTTGGG
GACTGACAGTAAAACTCTGATGTTTCTTTATAGTTTTTACTCGCAGCCAT
TTTGGATTTTTTTTGTACATTGTGTCGACATCTCAGGCTCATTTCCAAGT
GGCTTCAGCAAAATAAGAAATTAAATCAAACAACACTGCAAGGGTCAAAA
ACGTTCGGTAAAATGCACTGGAAGGGTACCTTTCACTGTTCAAGGGCTGC
ACTGTAAGGTTCCGATTTTGAAAGCCATTTTTTTTGCGGCACATGCCGTC
GTTTAGAAATCGAGTGCCCACCGGGGACCTCAGTGATACAGTAATAATAA
TATCTTTCCTCAGAGTTAAAAAGTAATAGTAATAATAAATATATTTATAA
ATATGTTTTAAACTCTATTGAGGTTGGCGCCCGTGGAGCGCCAGGATTTT
CTTTCCACCATCATTGTGAGTGCATCTGACTCACTCAGTCCATACAACTT
TGCATCTCTGATGACTTCACGGTATGTCGAATTCGTTACACCTGGTTTCT
TTTTTAGACCAGGGTGGTACTGTTCGAAAGTTAACTTTTTTATGTAGCAT
TTGTTTGAAGCTCTGGTGCAGTGTGCAATCCAGTTGTATTGCTGATTTTG
AAGGTACTTAGAAAGCGAAGGCCGGTCGATAAGGTTTTTGATTTGATCAT
TTGAGTAAAGTAGTTTTTTGAATGTTCCTTTTTTTCCATCATTTGTTGTA
TATTCAATCAGTTCAGGTTTGCGTTGATTACCGCCTCTGACTAGGTAATG
TAAGAATTTGATATATTGACTCTCAATATGATCGAATTGTTTCTTGGTCA
ATGTCCAGCACTGACATCCATACATGAGACGGNGGAGCGAACAAGTGATT
CGAGGTATAGAACTCTGGNNTAGCCATAAAAGAAGTAGAATTCCTGCTAT
GGCATATTCGGTTCCAGTGACTTCAGTAGGAATTTTGTAGGGGATATCAA
CAAATCGAATTCCAGCTTCACGACATCTCTGCTGAAATATTTCAACTGTG
TGGTTAGCGTAGATATTGTATAAAAGAGGGCTTTCGGGTCCACCTTGTCT
GACTCCCGAGGTAGTTTTAAAGATTATAGAACAACCTTTCATTGAACAGT
TAGTTTTATCATACATATCTTCAATGATTTTGAACATTGTTAGGTTTCCA
AAGTATCCTTGGACAATGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTCATTTGCGTAGTGTTTATTTCGTAGGAGT
GTTACTCGTTTACGAATCTTCCTTTGAGTTGCTCGATATTGCTTTTTATC
GTGTTTGATGTGGTATTGTTTTCTTCGCTCGAGAAGTTCTTTCAGTTCAT
AATCGTTATCCCATGGAAACGGTTGTTTTTGGGTTTTGTTGATACGAGGA
AGGAATTCTTCGGCCGATAGTTGTATGGTTTCGATTATGGTTTCTGGTGA
TACTTGTTGTGTAGGTGAAAGATTTTCCGTTAGGGATTTGACGAAGTTTT
CTTTATTATTTCGTGTGAGGTTTTTGAAATCGAACTTCTTAGATATTGAA
TTTGTATATTTTGAAGCNACAAATCCTGACCAGTGCATCTGGTAGTCTTT
GAAATCTAAGCAGTCTTTACCGAGTAATCGTGTCTCTTGTAAAGAACATA
TGTCGAGTCTGCTTTGTCGGACATTGTCAATAGTGTGTTTGATTTCAAGG
GGGTTAGAGTTTTCTTGTAACGACCGTACATTGANGGTGTTTTAAAACGT
GTAACAACAAGTTTATGATCACTGTGAAAATCATAGGATCTACGGACGCG
ACAGTCTAAACAAAAGCGTTGAAGAAACTTGTTGGTAATGGCGAGGTCAT
CATATATCTTTCTGGTACGGTTATCGTTGCTATACCAAGTATATGAATTT
GCGGGTTTGTGTCGAAAGTACGTGTTCAGAATAGGTGACTGAAATTCTGC
ACAGAAACGAACCAATCGATTTCCATTGTCGTTATGTTGGGCGTCTTCAA
GCGATTGACCATGAAAGTAAGTGGCTTTATGACGAATGACTGTGGTTGTT
GCGTTAAAATCACCGAGTATAATTAGTTGTCGTTTACGTTCAATATTTGA
CAGTTTTTTCAGATCTTTCCAGAATTCATCTTTCATTGAATCACTGGATT
TTTCAGTCGGGCCATATGCGGCAATAACTCGAAGGGATAGTCCCCAAACT
GATAAATCTGCATACATAAGTCGAGATGAGATACCTTCGATTGATTCAAT
AACGATGCTGTTGTGTTTCTTTAAGATAAGTGCGACACCTTGTTCCCGTT
TGCGAACAAATCCTGACCAGTGCATCTGGTAGTCTTTGAAATCTAAGCAG
TCTTTACCNTGGTGGTTGATAATCGTATCTCTGTTAGTTGTTGAATTGGA
GCTCCGAGATATGAAACTTCTCCAATTGACAAATAGAAATTACTCATTCC
ATTGTCGCGAGTGTTGTTCGGTACGGATTGGTTACCGCTTTTTACGGGTT
GGTTACCGCTTTTTACGGGTTGGTTACCGCTTTTTCAGGATCGTATCTGA
AAGAACAACGGTGGCCGTGCCCGCAAGGGCATACATGGACCACCTTATTC
ACTAATTCTTAATGGAGTGAATTTTTTTATCTGTCTTAAACAGGGATGTT
TTAATTCCAAACGTTCACAGGCTGCCAACACGCTGCTTGTCTTTCTCGCA
TCTAAATTTAAAACTTAACTTACAGGACCTCCTCACCAGATAAAAAAACG
ATATACTTTAAAACAACACATTCTAGCCAATGTTCTCTGCACTGCACGGT
TCAAATTTTCATTTTTCGGGTCAATGAGACATGGATAAGTCACTAAAAAT
AATCAGAAAATACTAGTAGATCATTTGTAGATGTTAGTTTTGCAAACTTC
TTTTCAAGTAGTAGATTGCAATCGTAAAAGGACGTCTAAAAAATAGCACA
GAAAAAAACAAACAAGATACCAAAAAACCTCACTCTACTACACAAGAAAC
TTTTTATTACTGTGTGTGTTTTAGAAAAACCTAATTCTTCTTTGCTCCCT
CCTCCATGCTCTCCACCTTTGAGGACCTCAAATTAATTAAAATTTCTCAA
GTGTTGCTATGGTAATATCTTTTTAAAGTAAATTGCAATCAAGGATAGAT
TCTTATTCTAAGAATTCAAGAGATTTTAACAAAAGAACTCAAACACCGTT
TGGGGGCAAACTCAAATATCTCGAAAATCATTTTATTAGCACGACGGTGT
ACTAAAAAACCAAAATAATGGTATAGAGGAACCTTTGAAATTTCAGTACA
TTTTCAGATTTATATGAATTCTTTATTCTTTATCGAAATTTTATCGAAAA
AAAAATTCTAAATTTTTCCTTTGAAGAAAATTCTTAGTCTATTTTATCTT
GATAATCCAAAAAGCAGTATCAGTATATACCTTAGAATAAAATGTATCAA
AATAGTAAATCGTGCACAAAGTGAATTTCATGAAGACAAAATCTACATTC
TTGGGAAATTCTTTTCTGAAAAGACCAAACTTGGCTGATCATTATGTTAA
AATGACTCAAAATACTACTTCTAAAAATTGGAGCGGTGAAATGTAAAAAT
CTTTTTAGTACTTTAGTACTTTAGTGACCTAATAAAAATACAGATAGTCC
ATCTACCCAGAATTGTGCCCTTAATTAAGGGATGTGAATCAAGTCTTAAC
TCAACCTCGTCCCTGTGTATCCCAGGCTTTATTTATTGATGGACGTCAGA
GAATAGGGGTATTATCTAGCGCGGTAATACGCAGGAAGCGAGGTCGGTCT
TGCGACAGATATTATAGAAACTGCATAGACAAGAAATTTGATTATTGAAT
AACAGGTTATATATTTTGTAGTATAGAATAATAATTTATGAAAGGAAAGT
ATATACACATCTCATCTTACACTCGTAAAGGTATTATCATAATAATGTAC
AAAAAAATCAATCAATAATAAAAATGTATTTTCTGTAAGAACCTAAATGT
ACATTATTTCTATTTTATAATATTCCACTCCTTATTATCTTTTCAACAAG
CGCAAAACCACTGTTTTATTCGAATTCTACTGAAAGTTACAGCCTTTGTT
GTTTCCGCTGCAATATTATATTGAACATCTATAAAAACATTTCATCGAAC
CATTCAAGCAATGGTGCAGTAAGTATAATCGAAAAGGTGGTGGTGATTTG
ACACACCCAAAAATCTAAAAAATAAGTTACTGCAAAGTTTTCCGAATAAA
AATATGTTTGAACGAACTATTGCCAACTTTGGATTTCAAATCCAAAGCTT
TAGGTAGAAATAGAATCATCTTTGGGCAAATTAATAGAATATAATACATA
CAAATATAAAAATACCCTTATTACGAAAAAAGGGAATAAAAACCAAGCCG
AATGAATATAATAAGCAAAGCATTAAAAAAACCCGAACGGTAAAAACATT
ACTTTATTTCCAAGCCATAATAATTTTCTTGAACTGAACAAAAACACCAC
GATCGTGTTTGCTAAAAAGAGAAACAACAATAAATAAACCTTTGAACCAC
ATAGAACCTTCAGTATTTTTCCAACTTTTTTTTAAGGCCCTAATTCAAAC
CGAATTGATTTCCGTTTTATTTCGGACTTAAACAGTCCAAGTTCCGTCTG
CAACAAAAGAACTAATTCCAAAAGCGTTGCGAAAGAGGTTTTTCAACGTC
GCTCAGTTGTGATTCGCTGTATATTAGATTTGATTCATTAGAAGAATTGA
TGCAGGATTCTCTTCAAGAAATTTTGGGTACAAGCTTTCGCGAATTAGAA
TTGATATTTGAAAAAATTATCACTTACCATTTAAAGTAACGAACTTTGTC
GTAAGTACCGTCATGCTTGCCAGCTGAAAAAACAAAACGGATCCTGGATA
AGCAATACAGTGGAGTCTCCATTACTCGAACACTCACGGGGAACGCATTT
GTTCGAGTTAAGGAATTTTCTTGTCACGGAGTAATATTGATGAGACATTG
TAAAGTTGAGGGGTCGTAAAACTTGTTCTCTTATGGAGGCATTCGAGTTA
TAGAGGTTCCAGTTAAAGAGACTTCACTGTATATGTATGCTTGATAATTA
CGATTCAAAAAATGAACAAAGAAGCGAATACTTTTTTACTCATCTTGAAA
ATATTATTCAAGTCGGTCGCACTTTAACATTATCTCCTAAAATTTGCTTA
CACAACGTTTTTAAACAAAAAAAGGAACATATTCTCTTTCTTCCGCGCAA
ATGCACAAATTTTTGAGAAATTCTTTGTTTATTACGTTTTGTCAGCATAG
AGGCGCGCCTCCTTCCTATATCATGAAAGCGAATATGATATTTATAATGC
AAGAAACTTCTGACTAGCCTGGATATCCAGACCGTAAACTATTTCACAGT
CTAGTTTGGTATATTTTTGTATCTAGTTTACGGTCTGGTCTACCTAGATC
GCATACATCCAAATCTAAGGATGCAAAAAATGATTGGTCGGTGCAACTTA
TCAAGATTTTCGTGGGTTTTTCTAAACGCCCATCTGCCTCATTAAAGCAC
CCGAATAATTTATGCAAACTGCCGAGTCATCAAAACAACTTTTTGTGAAG
AGTGAGGCACGTGGCTGGCTTTATGTTGTTGTTTTAGGCAGTTTTGATAG
TGAGATTTTCATTGATGTTTAATGCTAAGCTGATTATGTGCTTGTCTGAC
TGGGTTTAGAGCTCCTGCCAACAGGGGTTCATTCACACACATTATCAAAC
CAGACTTTATAATTTTAGAAATTTGTATGTTGAGGTATTTTTTATTTCTC
TAAAATTTTGAGTTTGGATATCCAGGCCTACCTCTTTAAAACTTTCTTTT
GTTCAAGCACAAAGTATTTATTAGGAAAAAAACCTCTTACATTCCGATTC
TAATTCGACGCCGATATAATCTCCTTGGTGATGAGGTAACGTTCCAATCC
ATTTGACTTGACCACGTGACAATCTACCACTAGCACGTGACAAACTGATC
CTCATCCCGATTCGGATGTCGTGCGATGAAGTCGGACAAAACGGAATCGA
AGATGTTGGAGAATGAATATTTCGTGGAGAGAGTACCGGCGAAGAATCTA
TTTTAAAGAACATAGCATCAAAAATTTATACCGGCTTAAAAACAATCAAA
TTAACCTTTTCTTGCCCGTAAAATTGCTTTCACATTAAATCCTTTCGTAA
AATCCTACATATATTTAATAATTTTCTCGAAAGTTAGATTCCGTTAGAAA
AAAAGTTGGGCTTCGTGTTTATCAAGAATAATCATACCTTGACTGGAGCT
ACCGAATTTATTCATCCCAGAATCGTACGATTTAGTCTTTGGGTGCCGAT
TATCTGGTCGGATGGAATGAGCGATGTGATCGTTTTCATCATAGTGACTA
TTGAGGTAATTGTCTAAAAGTGAAAGGAGAAAAGAAATTATAATTCTAAG
ACACGGAAGCAATGTGATGCACTTTTCAACCAACTGAATTTAAAGTCAAC
CTATACATATATGAAGCTGCTTGCTGATCTTGTAGTAGGAACTGGGGGGG
GGGGTCGGTAGTAAAATCTCAGACCTATATGAGTAGTAAAAGGATTTTTA
CCAATTTTTACATACCACCACCCAGACTCTTGGAAGAGGTATTTTACTAA
CCTGGTAGTAAAAGTTTTTGGGACAATTTGTCATGGAGACCATCTATTTT
TTGGTTGCTTTTTAGACTGATTTTACAAAAAAAGCTAAAAAATGATTATT
TCTGTGACACATTTTTACTTAGTGGAAAAATTAATGTTTTGCCCTTAGAA
TTAAAGTCTCTTTTATATTGACAAAAAATTTCGAGAATTTTTTGTGCAGC
AAACAACTTTCCACCAGAAAATTTTTTCAAATTACAAAAATTTTCAGATT
TTTTCAGAAAAGTCATCTAGAAAATTAAAAGAATTACAAAAATAGCTAAA
ATTTGTTAATTTTACCAGTTTTAACTATCCAGGTAGTAAATTTTTTTCAA
CATTTAACACATAGATACCACCCATTTTAGTATTTAACTACCCTGGGTAA
TAAATTTTTTTTTTAATTTTTCGTCACACCACCACCGTAGTAAAAGTCAT
TATGTCTGAGATTTTACTACCGACCCCCCCCCCTGGTAGGAATGCAAATT
ATTTATTTAGACAAAAAATTAACATTATATTTAAAAATCAAGTCAAGCTG
GTAGGAACGGAATTCCAAGATATTTTTCTGTTACTCATATTCGGTTTTAT
CAATGCTGATAAAACCGAATATGGCTCCGCAATACAGGTTGACCTTTAAG
GTGCTATATCTTTTACTTATCTTCTAAAGTCACAGATGTATCTGCATTTT
CTGAAAGACATTAGGTGTAGAAAGTTTCCTCTATCCCATTTTCATAAATT
ATTGTCAATATCCAAGAAGCTAGAGTATATGTAATTTTTATCTAATTTTA
TGGTGTTGTAATATTTCCTTCAAACGTAAATATATTATTTTGAATCTGTC
TCAAACCATCAAAAACATACTCATTTTTAAGTATAGCAATCGTTGAATCA
AAATGTGTTTTAAGGTTCTTTTAAAATATTTGGACAAAAGAAGCGTCAAA
TCTTACCTCCGAGTCCAGATGAGTGGTTCCTTTTATGTTTATTATTGCCT
AACCTATCATAGGAGCCATAAGTTGATGAACCTAAAGTATTCGATTCAAA
ATGGTACCCATTCGTCGGAGCTGTATATCTCTGATTCCGACTCTCATAAG
AGTTTTCTCCGTAAAGATTTCCCGCTGACTTCGTTCGTTTCCCGGCGTAA
GGTCGTCGATTTATTGTCTGTTCAATATCATTGCTCAACCCATTCCGAGT
TGAATCGGCCGGGCGACTCGGTAAAACTCGGTCTTTCTGAAAAGCTATTT
TATAGTTTTTTAATGTATTTCCATTCGCTCGACCTGGGGATTTGATTTGA
GGTTGATGCCGCTCTACATCGCTATTATCGTCATCATACGAGTACTTTTT
TACGTGTCCCAGTCTCTCTCGTAATTCTTTATTATCTTCTCGCAAACGCT
TCAAATTATTCGTAATATCGCTGTCCGTATATTTTGGAATATTTCGAGCC
TCTGTAGTTAATTGTTGATTTTGTTCACGAAGTTTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038373XLOC_038373Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061176-exon-scaffold_354-1575043694:610606..610967TCONS_00061176-exon-scaffold_354-1575043694:610606..610967Clytia hemisphaericaexon
TCONS_00061176-exon-scaffold_354-1575043694:596779..596966TCONS_00061176-exon-scaffold_354-1575043694:596779..596966Clytia hemisphaericaexon
TCONS_00061176-exon-scaffold_354-1510915933:610606..610967TCONS_00061176-exon-scaffold_354-1510915933:610606..610967Clytia hemisphaericaexon
TCONS_00061176-exon-scaffold_354-1510915933:596779..596966TCONS_00061176-exon-scaffold_354-1510915933:596779..596966Clytia hemisphaericaexon
TCONS_00061176-exon-scaffold_354-1491911889:610606..610967TCONS_00061176-exon-scaffold_354-1491911889:610606..610967Clytia hemisphaericaexon
TCONS_00061176-exon-scaffold_354-1491911889:596779..596966TCONS_00061176-exon-scaffold_354-1491911889:596779..596966Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:596779..610967 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.53801	3.04226	0.620442	0.522024	8.97947	5.76525	8.69441	10.2684	5.11396	5.22278	5.05875	5.17356	4.50181	4.23263	5.15478	4.1357	4.5086	3.69313	4.88292	4.50665	3.51618	2.93793	5.20896	5.06045	23.7955	19.6884	4.70807	3.49445	4.75837	5.21901
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061176 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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