TCONS_00060879 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060879
Unique NameTCONS_00060879
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2260

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060879 ID=TCONS_00060879|Name=TCONS_00060879|organism=Clytia hemisphaerica|type=transcript|length=2260bp
CCGCTATCATGGTTGAAAATAAAGATAATGACATGAGCATGCTTTCAACT
TCTGAAATTTCCGAAGACGAGTTGGAGAACAGTGACAACGATTCCGTTGA
TGACGAAGAACTCATCCGATTGGTCGATCAAGCAGCCAATGAGGAAACAG
GATCAATCACAGATGAACCAATCACAGTCGAGGAAAAAATCTTGGATGTC
GAAACCGTACCACGTGGTCCAGGAGTTGGCGCAGATACATCCAGTGAATC
GGGAGCGAGTGTTGGAGATGTATCGAGTGAACCCGATGAGATGTTTAAAC
TTGTTTTGGCGGGAAATGCGGCCGTTGGAAAATCAAGTTTCATTCTGAGA
CTTTGCAAGAATAAATTTTATTCAGCTCTGAACGCAACGTTAGGCGTCGA
CTTCCAAATGAAACGCATGATTGTCGATAAAAAGAAAATCGCTTTACAAT
GCTGGGACACGGCTGGACAGGAGAGGTTTCGGAGTATTGCCAAAAGCTAC
TTCCGACGTGTAGATGGGGTCGTACTGTTGTATGACGTCACATGTGAGAA
TTCGTTCCTGGATGTCAGAGAATGGATAGAATCGATTGAGAGCTCGTCTG
ATAACGTACCGGTCATCTTGTGTGGGAATAAAGTCGACTTGCGTCCTGAT
GCTGAGCGAATTGGTATGCCAGTGATTAGCCGAGACCAGGGCCAACAGCT
TGCCAAAGACGTTGGTGCGTTATTCATTGAAACTTCAGCTAAAGAGGGAA
CCAATATTCATCGAGCTTGCAAGGATCTCATAAGGATGATGCAGCGTAAT
GAGAATCCGAAACCTCACCCGAACGGAACAGTTCAACTCGATCCTGAATc
cgaaaaaccaaaaaaagctGGTTGTTGTGGCAAAAGTTGAAAAGTCTTTT
GATGAAAGTTTCCATCATTATGGATGCGATCAACAGATTGCGTAGAGAAA
AAGGAGAATGATTCGCCGATCCCAGGGCCATTCCGATTTGATGACTGATT
CGTATGGTTCGAATGGATATGGTCAGGTCAACTTCGGTACTAGTCCAACG
TTTACGAAGAAAACGTCTGGAAATTCCCTATGACGAGAACTCGTCAACGT
ACACCCTGGAATGCACGAGTGTGTCGCCCTGGAAGATTTGAGCTTTAAAG
TTAAAAACCATCTCACTTAACTGACATTACCATCTTCGCCTAGCCCTGTC
CATCCACAGACCAGGACGAAGATATTCGGTTACAATCAACTAAATGGACG
CAAGACTCAAGACTCAAGAATCAAAACACAAGACTCAAGATCCAAGACTC
AAGATTCAAGACACaatagattttaaatttaaagacAATTTTTAGAGTGG
TAAAATCTTAAGTATTTATATTAACAGCAGAAAATGAATGATTTTGGGGA
ATTTTATTTATGTTAAGTAATAAAACCCATTAAATTAGGATGTATTCCCA
AAAGCTGACAGTATTAGGGTTTGGTTTAATTTGTCAGACATTTTACAGAC
ATTTTACAGGTGTGATAGACCCTCGACATATCTATCAATACGTTAAGTTC
CTTAAAAAGCTTGCAGGGGGGAGGGGAATGATTTTGAGAGACTTCTAAAG
TTACTAATGGATTTCTAAATAGAAAATCCTACAATATGGCCCAACTAATC
TAGTTTTCTAAACCTCTTCCAGTCAGCTAGTACAAAATTTTAAAGCAACG
TTAAATGGATGTTGAAACTACGCAGTGTCGTAGCTACCGGGGGGCTAGAG
GGTGCTTatcccccccccaataattctCTTAATGAAATGGAGTATTTTAC
CTTTAAATTTTGCCtttattcgaattattttagttttttgagtgTGTTCT
TGGCCAATTTAGAGctctagatttcaaaatttcccccatcatgccaaacc
atggttggccctcacgGTGTCACTGAACTTATGCCCCTTCCCCCAATATC
AATATGCCTCCTACGGCACTGCTACGTTGTAAGTCAGCTGGGTTTTGTGC
ATTCATTATCATACATCgagaaaatcttttcttttcttttcttattttgt
tttgtttttcatctatttttgttttcttcatgTAAATAGTTTATTTGTCA
TatcaagatttgaaaaaattaaaaactattaTTGTACAAAGattcatata
tttaaaaatAGTTTCAGAATATAAACTATGAAAAATAACTAATTGTAATT
TTTACGTTTATGAGCTCATAGTACTATGATGagctacacttttttttaag
tACAACGAGG
Run BLAST on NCBI

transcript from alignment at scaffold_349:680658..689615-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060879 ID=TCONS_00060879|Name=TCONS_00060879|organism=Clytia hemisphaerica|type=transcript|length=8958bp|location=Sequence derived from alignment at scaffold_349:680658..689615- (Clytia hemisphaerica)
CCGCTATCATGGTTGAAAATAAAGATAATGACGTAAGGCTTATTTTTCTT
TTCGTGAGAAAATCTTTTAAATCAATGTAGTTTTAGTACTCTGGAGAAGA
GTGTAATAGGAAGAGATCATTTTCGACAGCCTTGTGTCATAGACCCGATG
GGACCCCTGCAACGTTGGAAGATTTGGCCAAAATTTCGTCCCCGGTTGGA
AAACCGAGCCCAACTGGGAAATTAACTTTGTTCTCTACCCCCACTGGGTT
TTCGACCTAGAAGCAATAGAATTCTACCCCCCATTGGGATTTATATATAA
ATTCTTAACTCCACAGCGGGATGACGTTCCACCGGGGCTGTGAGACAGGG
GTGTTTAATGGGTTTATGATATCAGGTAACGACGGCGATGGACTTTAAAG
GACGTTGTGAACGTTAGATTAACGTTTAAACAATGTTGTGTGCCAGCTGG
GGTACATTCACCAGGGCCTTTTCTGGTGTATCCCTGATGAGGTTGTGTGG
GTGGCGTGACCCATTATCAATGAGATAATGAGCCTAATAGTTAATGGCTT
GTAAATAACGAGAAATTTTTAATACAATTTAATAATTGTTCAATTATTCT
AAGCAATTTTGTCGTGTACAGTTGAGTCTCAGTGCAATTATGAAGGAATG
AAGGAATCCTTTTTTTCGAACATGTATGAAAGCTTGAAAACAAGTGGTAT
TTCTGTCACACACATGTGTAGAGAAAGAGATCAATTTTAAAGAATAAAAT
ATTTTAATAAAACAGCATTTTAAAGCATATAGATCGAACTCATGTGAAAT
TTTTAACACCGGAATTAAATTTTTGTAGTCGAATATTGTTTTTTCGGCGG
GTGTTTACAGTCGTCAATATAAGCCTTAAACGAGTTATTATAAACCATAC
CGAGTTAGTAACTCGTTTTAAGGATAATTAATTATTCGGAACAATCCGAT
ATAACTCGACATGAGAACATTCGCGAGTGGACCTTCTCACCCGGTTGTCG
AGAAAAGAATGCAAATACAATTCGACTTGAATTTGAATGAAATCGGTGCA
AAGACATTTGTTCATGAGCAAATTCACAGATCTTCAATGTTGATTCATAT
TAAAAAAAGACAGGTAAAATACTGAGATTGCTCTTTCAAATTTGAAGAAA
AAATTACAGAAAATTCAAAGAAATATTTTGGAATGTAACGGGTTAACTTA
CAAGATGAGAATTTTCTTGGAAGCTTTGGTAGTCTGACAGGTAAAATAGT
GAGATTGCTCTTTCAAATTTTGAGAAAAAACCTACAAATTCAATGTAATA
TTTTGGTGTTTAGCAGGTGTTAATGTATTTATAAAATGAGAGTTCTCATG
GAAGCTTAGACAGTCTGACAGGTAAAATAGTGAGATCTCCTCTCAATGAA
ATCCTCAATGAAATATTTTGCTAGGTAACAGGGGCTAAAAGAGCCTGGTT
AAATCTCTTCAGCGATTTGATGTAACTATTTGATTATTTAATTGTTGTTA
ATATAATTTGTTTAATGTACAGAAAAGTTAGCAGAAAGGGAGTTTTGATT
TTTCACTTAACCCAGGTCATACAAGTTTCTGTGACTTGCAAAATGACCTG
AGTTTGAATCTCCAATCTTGAAGAAAAAGAGAAAAATGTGACCTCCAAAT
TCTTGCATCAGAACAAAGCCGACTATTACTTATTTCCACAAAAGCAGATT
TTAAGTCTTACGTCTGAATAGAGCTTTAAAGAAGATTAAAAGTTTACTTT
TAGAAGATATTTTAAACCTTGTAAATAACATTTTATCTAACTAAACTTTT
GTTATATAACAATGCAAGCAAATCAACAAACAATTAAATCTAACTTCTTA
AACCTTAAATTTAAATTTAAAACATTTTTAGCAAAGTGACACATCGACTG
CTGAAGACACAACAACAAACGTGGTTTCAAACGATGACCAAACACTCGCT
CAAACAAAGGAAACATCAAGCTTTTGTACCACTTGCGATGGTGATACAAA
ATCAGGCCTCACGAACTGCCCAACCTGTGGTGAGGGTGACGCGCCCGAAG
ATACCGCCCATATTTTAGAAAACGTTTCATGGGATGAAACCCCGCCCTTT
TCTTTACGCCCAGATACGCCCATAAGTGGGCGCGATCGTAAAAACTCCGT
CCTGAGCAACCAAAGTAACCAAAGTCCGTCAACATCTAAAATACCAACAC
CAAGATCTATGAACAGCCCACGATTCCGAAGTGGCACCTTAAAGTCATCG
CCCAGAACCCCTTTAAGATCTGGCCGTAGTAGTTTACAGAACTCTCCTAG
AGTCGAAGACCCTTTGAAACCATTTGGAAGTGGTAGTTCAAAGTCATCGC
CCAGAACACCTCTAAGATCTGGCCGCAGTAGTTTAAAGAACTCTCCCAGA
ATCGAAGATCCTATAAGAGCTATACGTGAAAACAACCTCGAAAGTGGTTT
GAGACCATTACTTCAAGAAGAAGACCTTATAGAACCGTCAGAAATTGCTT
TAGACGAAAGTTCTGCACCTGAAACCACCACGGATGATTTTTTCCGGAAA
CTTGAAGATATCCCACCAAGTGTTTGCGAAACTTGTGATCAAACAATACA
AGTCGATTTTACCGGTACCGAACAATGCCAATGCACGTTGAATGAGCGAG
ACAGGTTATTAGATACTTTGCTTACTGATTCAGACTCGGATGATAGTTAT
ACTGAACAAGAAACAAGTCATTTGGGAATTAGACATCGAGTCCAAAAACC
ACCTCTCTCTTCTGATAATCAGGTACTAATTAAAATACGTCATTTTAAAC
ATTAAACATTTTAAAGTTTTCTAAACAAACTTATAAATGGCAAGAGAGGT
TTCTTTCTTTCTTGTTTTTTTTTTACAAAATCTGATTCCTCACAACGACG
ACAGAGTATGTAGAGATCGCACTCCTAGAAGAAACCGAGTTCCCAAAACA
TACAAGACCTTTTTACAGCTTCGATTCCTTAAACTAATCAAAAGAATTTA
AACTCTCTTAACATAGACAACATAAGTTCCTTAATGAGTTTCGATGATGC
TCTCTATTCAACTCGAACAAGTTTTTAGGTCCCTTCTGTTAACAATGTCT
TGTACTCTATGTACTCCATAACTCGAATTTCCTTAATTCGAACAAATTTG
CATTTCCCATACGCATTCGAGTTTTAGAGACTCAGCTGTATTAAAACTTA
ACATTAAAACACTCGCTTGCAATGTACCGGGTGCGCCACAAAAAAGTTTC
TCTCTTTAAAACTAATTTTCTCGAAATCTAAAAGTTTTAAAAGAACCATT
CCTATTTCATTGCAAAGAAGAAAGATAAACTTAAATTTTGATGGGTCATT
TATTAGATTCGATTCATTAGATCAAAAGTTATGCTCAATTGAATAAAAAA
GTTACTTTTGGAAAATGCTCAAAAACGTTAAAAATCGACCTATCAAATTA
AACAGAAGCATAATTACATGATATATCAGTATTTTCGTTTCATTCATTAA
AAATGATAATTAGCTGTCTAAATGACCTTTTGTTATTTAAAGGAAGGTTT
AATTTCAATGAAAGGAAGAAAATTTGTCAAAAAAGGCCAGATAATCTGGT
AAAATTCATAAAAATACATCAAATATGGGTTTCGAGGTAGATCCAGCCTT
ACATAGACTTTATCCAGACTAGAACCAAAAATCTGAGGAAAATTTCAGTA
AAACTAAATCAAATTGATTTTGATGACGATTTTAAACCCTTTCGGCCCTT
CAATTTCAAAATTTATGTGTTATGTTACTGAAAAATGCTCTTAATCGTGT
AAAGGCTATTGCAATTGCCAAATTTAGAGTAAAAATTTGATAGGTCGATT
TTTAACGTTTTCGAGCTCTTTCTGAAAGTAACTTTTTTATTCAATTGAGT
ATAATTTTTGATCTAATGAATCGAATTTAATAAATGACCCATCAAAATTT
AAGTTTTTCTTTCTTCTTTCAACTGACATAGGTGTGGTTCTTTTAAAAAT
TTTAGATTTCGAGAAAATTAGTTTCAAAGAGAGAAACTTTTTTGTGGCGC
ACCCGGTATTATAATCTATAACTCGAACAAATTCTGTTAACAATGCCTTA
TAAACTTTACTCCGTCGCTCGAAATCTCCTTAATTCGAACTTCCTCGTAC
GTGTTCGAGTTATGGAGACTCCACTGTTTTAAAGCGTAATATTAAAACAC
TATCCTTATAGTGGACATTTATAACAATTTATACTTTAAACGTTTTAAAC
ATTCTTAAAACCTTTTCTTTAACGACAACTTTAAGTACGACGACACAACA
AACGACTTTACTACAGACCCGACAGCGACACAAAATATGACAGAAGACAT
GTCGAAATCGTCGGCTTTTGGATATCCGTATGACCGACAGAAACCGTCAC
CGGTGTCCAAACGATTAAGGCTTCTTCATAACCTGGAAAGCGAGGTACGG
TTACAGATTCTGAAGGCATTCGTAAAAGAATATCTTAAATATTTGGTATA
CGTATTCGAAGCAACTATTTTGCCAGAATTTTACCTTTAAAAATGGATTA
GGATAAAAACACGCGTATTTTCTATGCAGTATTGCTGAATATTAAACCGA
AATTGTTAAACTATAAACTCCTTAAATCCATTAAAACTTAGAAAAAAATC
TAATTTCTAAAACTGTCGGTTTTGGCACCGTATTTGGCATATTTTCTTTT
ATCTTAACCGATAATCTCTTAAGACTGAGATCGACGGTTTATAGACAGAT
AACTCTATTTCAAGTCTCAGTTTTATGATTATTTTCGTTATCGCATCAGT
TGGGTCATATTCTCTCTTTGGTCATGCATCTCGCGGTAATATATATCTCT
AACCTTTATAGTCCTGAGCTAAGTTTTAAGCTTTGATCGAGGTTTTTTTG
GAAATGATACCCACAAAAACGTCATTGCAGCGTATTCATGATATGCACCA
CTGCAATGACTTCACGAAATTATGCAACTTTTCTGTCTTTTTTCCCCACC
CAATACGTCAATTTTTCTACTGTTTAAGTGACGTATTGGGTGGAAAATCT
TAAAAGCTCTCACAAGACTCTCCAGTGGTGCATATCATGAATACGAGTAA
CAATACCTGAAAAAATAACAAGGCTCTATCAAAAGTATTTCACGAAAAGT
AGATCTAGTTACATTTATACCAACATTCAAATCAACTCCGATCAAAAGAA
TCTTGCTTGACCGGGATTATGAAATTACCTCCAGGGTCTATATGAAGCTG
TCAGCTCATCGGTTAATAGTGATATTCCAGCACGCGTCACTTGAGCTATA
CTATGCTAACAGATTCAGTGAGGGACCACTTCCAGTAGGTCAAAGACATT
TGAAGTCTTACCTAAAGTACTGATTTGACATGGATATCAATTAAAGAGCC
ATTCGACTGCACGACTTACTAACTGCGAAAATGTGAAAAAAAAGTTAAAC
AATATCATTATTGTATTGGGGTTTTTCATGTTTTCTTAAATTCCGCCCTT
CTGGAAGCAAACGTTCGAATCTGTAGAGGCAATACCTTACGGAAATCGAA
CTTTTGCTTCCATAATGGCGGGATTGACCATTTATGCTACCCGTACCAAT
GGCAATCACCAGTTTATCCTCACCATTTATGCCAGGAATGATAATCACCA
ATTTAGCCTTCTAGTGTTTTCCTTATAATTTAACAATCGTTTTCATCTTT
CTTTTTAGATGAGCATGCTTTCAACTTCTGAAATTTCCGAAGACGAGTTG
GAGAACAGTGACAACGATTCCGTTGATGACGAAGAACTCATCCGATTGGT
CGATCAAGCAGCCAATGAGGAAACAGGATCAATCACAGATGAACCAATCA
CAGTCGAGGAAAAAATCTTGGATGTCGAAACCGTACCACGTGGTCCAGGA
GTTGGCGCAGATACATCCAGTGAATCGGGAGCGAGTGTTGGAGATGTATC
GAGTGAACCCGATGAGATGTTTAAACTTGTTTTGGCGGGAAATGCGGCCG
TTGGAAAATCAAGTTTCATTCTGAGACTTTGCAAGAATAAATTTTATTCA
GCTCTGAACGCAACGTTAGGTAAATATGGAATTTTTTAAATTTATTTCAT
CTTCTGTTCAATGTCCTAGGTATTTGTTGGGACCATTGGGTTTTTGCATC
AAGATTTCGGAAGTGAATTGAAAAATCGATGTCAATAACTAAATACTATT
ATGAAAGTTACATAAACGTCGATCTCAGATTTTGTGCTTGTTGGGAAGGT
GTACTAAGGGACTCTATGTTGCAACTTGAAAACTTGAGCCTTGAAACAAT
ACGTAAGCCCAGGAAAATTTCCTGAAGGTTTTGGATAAAATTTTACGTAC
ATGTCAAAAAAGCTTAATAATTTCTTGAAAGTATATTGAGACTTTACTTT
CAGATTCGTAAAAGCTAGTAGCAACACTAGGGGCCAATTTTCAAACATTT
CTACTTTTTTTGCAGGCGTCGACTTCCAAATGAAACGCATGATTGTCGAT
AAAAAGAAAATCGCTTTACAATGCTGGGACACGGCTGGACAGGAGAGGTT
TCGGAGTATTGCCAAAAGCTACTTCCGACGTGTAGATGGGGTCGTACTGT
TGTATGACGTCACATGTGAGAATTCGTTCCTGGATGTCAGAGAATGGATA
GAATCGATTGAGAGCTCGTCTGATAACGTACCGGTCATCTTGTGTGGGAA
TAAAGTAGGTCTTGATTCTAAATTACCACGAAAATACTCTATTCCATGGT
TCCCAATTTCATAAGTTCAGGAACTTAATAATTTAGCAATGAGTTGGAAA
GGAAAGTTTTAACTCTGACCTTAGGATCTCAGGATTTAAAAGCTCAAATC
TGCCCCAATAAGGCTTGGAATATAGCCTAGAAGCTATCGAACCCCTCCAA
AATCGAAATATTCAATGAAATAACGTTAAATTTTGAAAAACGTTAAAATA
CACTAAAATCTCAATATTCGACCATGATTGTAGCCATTGATTCAATATTT
CCTCCCTATTATTCATTAGGTCGACTTGCGTCCTGATGCTGAGCGAATTG
GTATGCCAGTGATTAGCCGAGACCAGGGCCAACAGCTTGCCAAAGACGTT
GGTGCGTTATTCATTGAAACTTCAGCTAAAGAGGGAACCAATATTCATCG
AGCTTGCAAGGATCTCATAAGGTAAGGTTGCCTGAAGATTGTCACCAAAG
TGGTATGAAAAATAAAAAAGTGTATTTTCTTCCTGACTGACATAAGTTAA
TTTAGAATTTCTGTATATTTGTACTTGAAAAATGGTCCCACTTTCACTAA
ATTCTCCAAGATGATAGCTCATATACTATGTAAAAAGGAATTTTCGATTC
AGGCACATGGCTCCTATGTAATCTAAGGAACTTAAAAGAATAATTGACAG
ATTATTGCAACGATTTCATCACATTATTTTGCACATTTCCGACTTCACAT
ATCCTAAATCTTTTAACTCCTTTTTTTCGCAGGATGATGCAGCGTAATGA
GAATCCGAAACCTCACCCGAACGGAACAGTTCAACTCGATCCTGAATCCG
AAAAACCAAAAAAAGCTGGTTGTTGTGGCAAAAGTTGAAAAGTCTTTTGA
TGAAAGTTTCCATCATTATGGATGCGATCAACAGATTGCGTAGAGAAAAA
GGAGAATGATTCGCCGATCCCAGGGCCATTCCGATTTGATGACTGATTCG
TATGGTTCGAATGGATATGGTCAGGTCAACTTCGGTACTAGTCCAACGTT
TACGAAGAAAACGTCTGGAAATTCCCTATGACGAGAACTCGTCAACGTAC
ACCCTGGAATGCACGAGTGTGTCGCCCTGGAAGATTTGAGCTTTAAAGTT
AAAAACCATCTCACTTAACTGACATTACCATCTTCGCCTAGCCCTGTCCA
TCCACAGACCAGGACGAAGATATTCGGTTACAATCAACTAAATGGACGCA
AGACTCAAGACTCAAGAATCAAAACACAAGACTCAAGATCCAAGACTCAA
GATTCAAGACACAATAGATTTTAAATTTAAAGACAATTTTTAGAGTGGTA
AAATCTTAAGTATTTATATTAACAGCAGAAAATGAATGATTTTGGGGAAT
TTTATTTATGTTAAGTAATAAAACCCATTAAATTAGGATGTATTCCCAAA
AGCTGACAGTATTAGGGTTTGGTTTAATTTGTCAGACATTTTACAGACAT
TTTACAGGTGTGATAGACCCTCGACATATCTATCAATACGTTAAGTTCCT
TAAAAAGCTTGCAGGGGGGAGGGGAATGATTTTGAGAGACTTCTAAAGTT
ACTAATGGATTTCTAAATAGAAAATCCTACAATATGGCCCAACTAATCTA
GTTTTCTAAACCTCTTCCAGTCAGCTAGTACAAAATTTTAAAGCAACGTT
AAATGGATGTTGAAACTACGCAGTGTCGTAGCTACCGGGGGGCTAGAGGG
TGCTTATCCCCCCCCCAATAATTCTCTTAATGAAATGGAGTATTTTACCT
TTAAATTTTGCCTTTATTCGAATTATTTTAGTTTTTTGAGTGTGTTCTTG
GCCAATTTAGAGCTCTAGATTTCAAAATTTCCCCCATCATGCCAAACCAT
GGTTGGCCCTCACGGTGTCACTGAACTTATGCCCCTTCCCCCAATATCAA
TATGCCTCCTACGGCACTGCTACGTTGTAAGTCAGCTGGGTTTTGTGCAT
TCATTATCATACATCGAGAAAATCTTTTCTTTTCTTTTCTTATTTTGTTT
TGTTTTTCATCTATTTTTGTTTTCTTCATGTAAATAGTTTATTTGTCATA
TCAAGATTTGAAAAAATTAAAAACTATTATTGTACAAAGATTCATATATT
TAAAAATAGTTTCAGAATATAAACTATGAAAAATAACTAATTGTAATTTT
TACGTTTATGAGCTCATAGTACTATGATGAGCTACACTTTTTTTTAAGTA
CAACGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038221XLOC_038221Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060879-exon-scaffold_349-1575043694:689584..689615TCONS_00060879-exon-scaffold_349-1575043694:689584..689615Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1575043694:683547..683907TCONS_00060879-exon-scaffold_349-1575043694:683547..683907Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1575043694:682912..683150TCONS_00060879-exon-scaffold_349-1575043694:682912..683150Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1575043694:682445..682596TCONS_00060879-exon-scaffold_349-1575043694:682445..682596Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1575043694:680658..682133TCONS_00060879-exon-scaffold_349-1575043694:680658..682133Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1510915933:689584..689615TCONS_00060879-exon-scaffold_349-1510915933:689584..689615Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1510915933:683547..683907TCONS_00060879-exon-scaffold_349-1510915933:683547..683907Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1510915933:682912..683150TCONS_00060879-exon-scaffold_349-1510915933:682912..683150Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1510915933:682445..682596TCONS_00060879-exon-scaffold_349-1510915933:682445..682596Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1510915933:680658..682133TCONS_00060879-exon-scaffold_349-1510915933:680658..682133Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1491911889:689584..689615TCONS_00060879-exon-scaffold_349-1491911889:689584..689615Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1491911889:683547..683907TCONS_00060879-exon-scaffold_349-1491911889:683547..683907Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1491911889:682912..683150TCONS_00060879-exon-scaffold_349-1491911889:682912..683150Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1491911889:682445..682596TCONS_00060879-exon-scaffold_349-1491911889:682445..682596Clytia hemisphaericaexon
TCONS_00060879-exon-scaffold_349-1491911889:680658..682133TCONS_00060879-exon-scaffold_349-1491911889:680658..682133Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:680658..689615 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.19652	0.785949	0	0	0	0	0	0	0	0.796176	0	0	0.289556	0.774024	3.18122	6.62232	1.40747	2.01199	0	3.04317e-09	0	0.106721
Blast
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BLAST of TCONS_00060879 vs. Swiss-Prot (Human)
Match: RASEF (Ras and EF-hand domain-containing protein OS=Homo sapiens GN=RASEF PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.169e-57
Identity = 105/197 (53.30%), Postives = 140/197 (71.07%), Query Frame = 3 
Query:  294 FKLVLAGNAAVGKSSFILRLCKNKFYSALNATLGVDFQMKRMIVDKKKIALQCWDTAGQERFRSIAKSYFRRVDGVVLLYDVTCENSFLDVREWIESIE-SSSDNVPVILCGNKVDLRPDAERIGMPVISRDQGQQLAKDVGALFIETSAKEGTNIHRACKDLIRMMQRNENPKPHPNGTVQLDPESEK-PKKAGCC 878
            +K+VLAG+AAVGKSSF++RLCKN+F   ++ATLGVDFQMK +IVD ++  LQ WDTAGQERFRSIAKSYFR+ DGV+LLYDVTCE SFL++REW++ IE ++ + VP++L GNK D+R  A   G   +    G++LA   GALF ETSAK+G+NI  A   L R +++  +     + T      S+K P+   CC
Sbjct:  542 YKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNKADIRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKKRTDKDDSRSITNLTGTNSKKSPQMKNCC 738
The following BLAST results are available for this feature:
BLAST of TCONS_00060879 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RASEF1.169e-5753.30Ras and EF-hand domain-containing protein OS=Homo ... [more]
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