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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060522 ID=TCONS_00060522|Name=TCONS_00060522|organism=Clytia hemisphaerica|type=transcript|length=1157bp
CTTATGgtgaaatgttgcatttttcaattcaaaattgtttCTTTCATGCT
GGTGTATTATTCATGTCATTAAATTAAATGTTTCATACAATTCAAATATG
TTTTGTGTATGCTCAGGTTAAGTATCTTATATTATTAAAAAAGAAGCATA
ATAATGACATCGACATTCCAATGGCCTTGGCAATACAACTTTCCACCTTT
CTTTACCATACAACCAAACAATGCCACACAGGCTAAACAAATAGAAGCAT
GGCGAGCCTTGATATTGAGCTACTACAAACACAACAAAGAGTACAGGCTT
GATGTGACAGAAGCACATAActctgttttgtttacaaatgaAAGTATCAA
ACGAAAGCTTGCCATGGAGGATATAGTGATGGTTTTGGACACTTTGGCGA
AAACTGGACACGTTGAGTGGGATAatgataaagaaaaacaaaggtgTTTT
GTGATGTGGCGCACACCTGATGAATGGGGGGAGCAAATTTACAAATGGAT
AGGGGATAATGGTATGTTGGATACAGTTTGTACTTTATATGAACTTCATT
CTGGTGATGATACTACCAATGAGGAGTTTCATGGGATTGATATTAATGTG
TTGTTAAAAGCGTTAGAAGCTCTTGAACGACGTGGTAAAGCTCAAGTGTT
TACAGCACAGGATCCTTCAGAAGTTGGTGTCAAGTTCTTTGCATGAGGGA
GAGTtatgtttctttttaaattcaatttagGAATAAGATTCTGGAATCGA
acttcaaattcaacaaaattctacaaaatttgaagaatcttgcctttaat
ttgttatttttgaaactttgcttTGACCGTGTTTATTGAAGCTCGACGAA
TTTAAAGCACGGTGTACAAGCCCTTCTTAagcaatgggccattccatttt
atatccatacatgggGGTGGATGAACATATCCTGATGGTTATTCCAGGgg
atcttttttcatttttccgaggggataaaaagttattctaaaattttacG
GGGTAaaagggtaaaagactgatttcagTTTGTCCACCTTCAATTTAAGG
TAAGAAAAGAATCTTTCCAAAGGGTACTTAtgcaaatttcgcgattttcc
agggggtatcgacacattttgacttaaaaaggtttgttcacccccctgta
tggttaa Run BLAST on NCBI protein sequence of TCONS_00060522-protein >TCONS_00060522-protein ID=TCONS_00060522-protein|Name=TCONS_00060522-protein|organism=Clytia hemisphaerica|type=polypeptide|length=180bp
MTSTFQWPWQYNFPPFFTIQPNNATQAKQIEAWRALILSYYKHNKEYRLD
VTEAHNSVLFTNESIKRKLAMEDIVMVLDTLAKTGHVEWDNDKEKQRCFV
MWRTPDEWGEQIYKWIGDNGMLDTVCTLYELHSGDDTTNEEFHGIDINVL
LKALEALERRGKAQVFTAQDPSEVGVKFFA Run BLAST on NCBI transcript from alignment at scaffold_344:55659..65579+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060522 ID=TCONS_00060522|Name=TCONS_00060522|organism=Clytia hemisphaerica|type=transcript|length=9921bp|location=Sequence derived from alignment at scaffold_344:55659..65579+ (Clytia hemisphaerica)
CTTATGgtgaaatgttgcatttttcaattcaaaattgtttCTTTCATGCT
GGTGTATTATTCATGTCATTAAATTAAATGTTTCATACAATTCAAATATG
TTTTGTGTATGCTCAGGTTAAGTATCTTATATTGTAAGTATTGTAGAAAA
CAGGCCAGGTGCTATCTTTTTTACAGCATTCTTTTTGCTCTTTTCTACTA
GAAGATAAGATTCCCTTTCCTGACTGCTAAAGATTACTGCCACTTTTCTA
CCGGAAAAAGATCAGAACTCAGGGTAGTTGAGAAATGAGCTTTAGAAAGT
TAGGCAGAAAATCATAGATTACCAAAACGTGCCGAAACAGATTTGCATAg
ttacgaccctgcctatgccccggacagtccggggtttttttgttgcgtgc
ccggggtccgtattatttgNTTGCATATAAATGATGACTTCGTCATTTTG
GAAATGGTTTGTCTTTTTTCAAtctatgatttttatgaaaaatggcGGCT
TGCATATAATTAACATCAAAGGCCAAAAGgtctaccgtgagattgggtaa
ggctgtcatcaaaaaattgttctattcgcgtcacctgcccgcatcaaatt
ttccgctgattttcagtgcggagatgcggaaaaaaatctgggaaaagcaa
tttgttcttttaaagtatagcttttttctcaattgctctgacgaccatcg
aaaaattgttttgcttgcgttaccacccgcccctgagttactggcgtgat
taaaaaaaaaaccagaAATGTTTTTGACTGCCCGTCCGCCCGCTTGCATT
Ttaaacacccgttgcgacgcgaacagagcattttttcgatgaccgcctaa
cttgtatcagtggaggctaacgtaacatgcatagccctcaaaatgaatga
cctgtctggtcattaaaatacaactacgcagctccgctcccagatctact
ctaccatttttgttttgatttaactttgtattttaatgaccagccaggtc
tttcatttgagggctatgcatgttagcctccactgatgcaagttacccaa
tctcacggtatttaACACGACCCTcaacatggcccgagaattctcgggcc
aaaacttttattggaattcgcgtaaagcccgagtatggcccgagctgggc
cgtgttcgggccacacgcggggcacgcacgggccacacgcggggcaattt
ttgaaaacatgatttaaaaggtaggaaataaaaaacttgaaaagagCGCC
GCCCTCTAAAGAGTGCCGCACCTAAAATTACGAAAATTTTAAGAGCGACG
CGGCGTTTAGTTGAGGAAATACGGTACCTAACTTAGGAGTTTACTAGACT
GCTGGCACCCATTACAGTAACGGATTCGATTTGAACGATTTGATAACGAT
TAGAATctagatcaaaacattcgaaagagaaTTTGTCACTGTAATGtctt
caatttttctcaatCGAATGCGAGAAGACAGGATACTGTCTATATCGCAC
CTCGACGTCTTTTGACCAATTAAATCGCTAGAATCTTACTGACGCGCtgt
cttaatttttcatctttaatcTGCTCTTCCGtacagggttcgaattatag
cttcGCACTTCGCAAAATGCGAAGTGAATTCTAGGTTTAGCGAACCAAAA
GGTTTTCCTAGCTCAAAAAAGCGAAgctaaaaaattaaagaaacacCATC
TTTGCctctttattcactcgtttatcgcTTCATAAAGTCGCTATTTtgtt
cactcgtttatctattactttttttaaactccCTTACTACTGTACTTTAT
TCCTTCGTTTATCCAATGCTTTATAATCTCGCAATTTTATTGATTCGTAT
ATCCATGGTTTTATAAACTCGCCACTTCACTTTGTCTACAGTCCCAAACG
ACAGTctttattttaaagaaatacTTTGCTTTTCTAGAGAAATACTTCGC
TTTCCTAGTGGAATGCATTGAAGATACTTTCGCATTTTCTTCTAAACACC
atcgcaaaatactaaaaatgctTCGTAAACAGTGCTaaaattttcgcctg
cggcgccgTATTTTTCAACCTCGCTACGCTCGGATGATTGGCGAAGCTAA
ttaaatttataattcgaaccctgcaGTAATCGATTGAACTCATCGTTAAT
CTATAAGAGAAAATATTTATATGATTCAGTACTTTGCCCCTACTCCGTAC
TTAGATTAGACTCAGACAGGCTTAAAAGCGTTATGAAAAaggaatgactc
gggtcatgttcgggccaaaagaattgatagggtctctcggcccgaagaTG
GCCCAAAGAGGCCCGAGGGTCGTTATTTAACTTGAGTGTGAATAGGATCT
TTAGCTACACAAGGTCAATACAATTTTGAACAACCACTCCATAAAATAAA
GTTGGTAACATATTCCGCCAACCtgttctaacttgggacaattgatcgaa
acatgggactgtggGACATGGGACATACGACCCTGTCTATGACCCATGTC
TATGTGGTCTTGTGTGGCATACAGTTTCTACTACTTTGTCGGTCGCTTTG
TCATAATTTGGAAAATTCTGTGATATGATCCGGATGGTGTTGGGATAact
gaagaaaatgaaaatataataaaacTGTAAGTCATATGAGCAGTAGTAGT
AAAAAGACGTGATCTGGACGTGACTATGTTTGTTCATTGGCCGAAAGGGG
GTGAAGTTTTGGACCTTGGTAAgatgtttgaaaagaaaactttaacgact
aaaaaactaattaacatgctttcaacgaagatatccaggtctttcatttt
agggctatgcatgttagcctccactgatgcaagttacccaatctcacggt
agagCAAAACTGAATTCTTATTTCTGTACCGCGATTTTGCATCTTTACTG
TTTTGAAAGGCACTTTTATCTTTTAAGCAATGAAAGGGTTTCATAATTTT
AGCTAAAATCAAGTTTCACTTAATTCCCCTCAGCTTTTAGATGAAAATGC
CTGTTTTGgcagagagaaaaaaaatgacCAAAGAGGAGCTTGAAGCAATA
GCTCCATTTATTTTGGAAATGCGTCGAAGAGAGCAAACACAGGAAGCTGA
GCTGTTACAACACATACAAAACATTGATCAGAAAGATGATTTCAAAGTAG
AGGAGGCGGAAGAGGAGGACCATTTTCAGAGACAAGAGatgataaaattt
tttgaagatcaCTTGAACACTGTACGTCAACACATTGATGAGCAAGAAAC
AAATTTAACAAATCTGCAACAAGAAAAACTTGATCTTTtcgagaatttca
aaaaatctttacaaatcaaacacaaacaacaacttgaacaacaaaaacaa
cagcaACCAAAATGAAATGTTCTCTTcattattgatttttctttagtttt
gtaAATAATCATTCAGTATTTATTTCacccattttttatttcttttatat
cCTCAGTATAACATAGTAAAACAATTGATAATTATTGAGAAAATTGAGTt
tactttttaataattttattcaTCTGTCGCCTTGAGTTATGAAATAGAAA
TGCAACCTGGGTAATATTACATAATTGGTGTCTGCAGAGAAATGGACAAA
ACCTTTTAAAcctaatatgaaaaaaaatgtcttttcgaGTTCTAATGAag
cttttttccaaaattctcaaatatttgtttaaatttttctagtgaagtaa
aaagaaaatcaaatacaATGCCTTTCACAGAAGAGCAATTAAAAGGGTTT
CTGGAAAACCTTTTGAAAggtcaaggaaagattgaaaatgttgaatttaT
CCATTCAACCTCTTTGATAGCCAGCAGTTCAAAAGGTGTAATAATTCAAT
ATGCTAACGGCACAACCAAAAAGCTTCATTTAAAGCTTTGTGAAGATGGT
ACAACTCCTGGATTCTTAAATgacaaattgaaaatatttgaacgaGAAGA
ATTCTTTTACAGCAGTCTCTTACCAGAAATGATCAAATTTCAGATAGAAA
ATAAAACAGATGAGAAATTAAACCATGAAAACAGTATCAAGTCATTGTTC
TTCCCATACCATGGTAGCCATCATGTTGAAGGGGCCggtattgttgttgt
tttggatCGTTTCTCACCAGAAGAATATTTTGTGACCAAACCTGAGGAGT
TTCACACTTTACAGCAAATACATCATTGTATGAAGAAGATAGCAGCTTTT
CATGCTGTATCATACTCAATGAAAATCAAGAAAGTTGTCGATTGGAATAA
TTACAGCCCATACCTCCCTGATGTTCTTTTCCATCCTTTAACTGAAgatg
tctcaaaaacctattTCAGTAGCATCTTTGCAAGTAATTTGAAAATCTTA
CGTGCCATCAAGGAGGAAATTAAAAATGGAAATCAACTGGTTGAAGACTG
TATTCTGAGTTTCAATTCATTATCTGCTGGTATATTGGACAGAATTGAGA
AGTTGATACCAATGTTGCCTAAAATTCTAACCAAAACTCTGGAATGCCCT
GATGAATTACTTATTGTGACCCATGGAGATTTTCATATGTGGAATATTGC
ATTTGCTAACAAAGGTGAAATGGAAGCCAAATTCTTTGACTTCCAAATGT
TACGTACAACATCAGGATTGGTTGATGTACACCATTTATTATCACAAGTC
TGCACGCCTGCTACAAGGAATCAGCATTTGTACAAATTTTTAAACACATA
TCACAAGTCTTTTAAACAGGAGTGTTTGGATCTAGGCTTGGAGGAATCAC
AGATTGATTACTCTTTAGAGGCGATAAATAAAGAGTATGTCATGCGTTCA
CCTTGGGGTTTTGTGTTTGGTTTCTGTTTCATTTTACCAAGATTCTTATC
AAGCAAACAGCTATCACAAGAGTTTTATGccaaattaaatgactttgaaa
gCAGTAGCAGCATTGTGGAATGGATTTCTAAAAACGCGAGTCCAAATGTG
TGGAGTGTTTTGGATATGTATGTGGACATGGTGCAGATAGATGATGATCT
GGGTACCTTAGAAATCATGGAGAAATATACTCAATAGCCTCTGGctcttt
ttaagtttttttcaaattagctacaatttgttttttaaaagcttACCAGA
TTGATTTTTTTACCAGAAAGACATTAGACAAAATGCATTTTATAGTAGGT
GTCTATTTTCCTAATTAGAAGTTGAGGTTtggccaaaatcaaaatttatt
aggACTCCGCTCTGttctttattgattttgtaagttttaagtgttaaaaa
tgttaaaaaaaaggacTTTTTCGTATACAAAGCAATCTAAGATGAAATAA
ACTTCTTCTGAttgtttattgaaatttcaaaccaCCACcattagcttgaa
atattgataCCAAATCTAATCAGCTGCTCGTTTGAAATCTACTTAGATTA
CGAATTAGTTTTTAACtttaagatgaaaataaaacttGTGATACAAATCC
ATATTCATGTTATTAGTTGTAATACAAAAACGAAACGTCCAAAATATATT
TAGTTTCTGGAGATTAGATTAGCTTTTTATTTGGACTTGCATTTGCATAT
TTTTACAGtggaatatatttttaaaattttgatttaagaaataaaattat
ttttatgcaGTTTTAATGTCTCCTTGATTCACTTTTATCAACCTTTCAAT
GTCATATTCTGCTTTTTAATTGTCTTATTAAAATCAGATCGTATTCAGTT
ATTGTTATCAATCTTCACTGAAATGCCAGCAAGATTTCATTCTTTGTcca
taaaatataaatttcaataattttaatttccccaatttttaaaatttaca
cTTGGAACACAGTTATTTTCAATTTAGAACTAGAAGCATANATGTCTTTT
CGAGTTCTAATGAagcttttttccaaaattctcaaatatttgtttaaatt
tttctagtgaagtaaaaagaaaatcaaatacaATGCCTTTCACAGAAGAG
CAATTAAAAGGGTTTCTGGAAAACCTTTTGAAAggtcaaggaaagattga
aaatgttgaatttaTCCATTCAACCTCTTTGATAGCCAGCAGTTCAAAAG
GTGTAATAATTCAATATGCTAACGGCACAACCAAAAAGCTTCATTTAAAG
CTTTGTGAAGATGGTACAACTCCTGGATTCTTAAATgacaaattgaaaat
atttgaacgaGAAGAATTCTTTTACAGCAGTCTCTTACCAGAAATGATCA
AATTTCAGATAGAAAATAAAACAGATGAGAAATTAAACCATGAAAACAGT
ATCAAGTCATTGTTCTTCCCATACCATGGTAGCCATCATGTTGAAGGGGC
CggtattgttgttgttttggatCGTTTCTCACCAGAAGAATATTTTGTGA
CCAAACCTGAGGAGTTTCACACTTTACAGCAAATACATCATTGTATGAAG
AAGATAGCAGCTTTTCATGCTGTATCATACTCAATGAAAATCAAGAAAGT
TGTCGATTGGAATAATTACAGCCCATACCTCCCTGATGTTCTTTTCCATC
CTTTAACTGAAgatgtctcaaaaacctattTCAGTAGCATCTTTGCAAGT
AATTTGAAAATCTTACGTGCCATCAAGGAGGAAATTAAAAATGGAAATCA
ACTGGTTGAAGACTGTATTCTGAGTTTCAATTCATTATCTGTTGGTATAT
TGGATAGAATTGAGAAGTTGATACCAATGTTGCCTAAAATTCTAACCAAA
ACTCTGGAATGCCCTGATGAATTACTTATTGTGACCCATGGAGATTTTCA
TATGTGGAATATTGCATTTGCTAACAAAGGTGAAATGGAAGCCAAATTCT
TTGACTTCCAAATGTTACGTACAACATCAGGATTGGTTGATGTACACCAT
TTATTATCACAAGTCTGCACGCCTGCNaaagatttttttttttgacttta
aacatagacaaattatataccaatcgatcacaaattttatgctgattaag
aaaaaggtcagaatcatggtctgaaaatttcgttttctggagatatgaag
ctttttcgatttcgattttttgtaatgactacttttggttccagatttgc
gtggctgtaacatttgattggctcacttaatttacttgaaattttcggag
ggtcttgcctactgttcaaataatgaaattcaggaaaagttttttttcta
catgaatttcgaaatccataatggcggattcaaaattttctttcgtcaca
tgggctcttaggctctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtagca
gagcctaagagcccatgtgacgaaagaaagttttgaatccaccattatgg
atttcgaaattcatgtagaaaaataaattttcctgaattttattatttga
acggtaggcaagaccctccgaNTTTTTTCAAATTAGCTACAATCTGTTTT
TTAAAAGCTTACCAGATTGATTTTTTTACCAGAAAGACATTAGACAAAAT
GCATTTTATAGTAGGTGTCTGTTTTCCTGATTAGAAGTTGAGGTTtggcc
aaaatcaaaatttattaggACTCCGCTCTGttctttattgattttgtaag
ttttaagtgttaaaaatgttaaaaaaagtactttttcgTATACAAAGCAA
TCTAAGATGAAATAAACTTCTTCTGATTGTTTATTGAAATTAAACCACTA
CCATTAGCTGGAAATATTGTTACCAAATCTAATCCTGCTCGTTTGAAATC
TACTTAGATTACGAATTAGTTTTTAACtttaagatgaaaataaaacttgt
tactctaggggctgagttaggtcccgtatgcgcatcggcgtatagtcatt
ttttcttttgatcatgaaagtatagtccttgaagagtcagaaaacgtgtN
catttcaaaaaatcaaaatcgaaagtgcttcatatctgcagataacgaaa
ttttcagaccatggttctgacatttttcttaatcagcataaaatttgtga
ttgattggtatataatatgtctatgtttaaagtttaaaaatttttttttt
caagcaagagggctaaaaagggttgaaaatctaaaatccgccattatgga
aatttgtgcctgatccaaataacgccacacacgttttctgactcttcaag
gactatactttcatgatcaaaagaaaaaatgactatacgccgatgtgcat
gcgagacctaactcagcccctagagtatgtGATACAAATCCATATTCATG
TTATTAGTTGTAATACAAAAATGAAATGTCCAAAATATATTTAGTTTCTG
GAGATTAGATTAGCTTTTTATTTCGACTTGCATTTGCATATTTTTACAGt
ggaatatatttttaaaatcttgaattaagaaagaatattatttttttgca
attttaatgCCTCACTTGATTCACTTTTATCAACCTTCCAATGTCATATT
CTGCTTTTTAATTGTCTTATTAAAATCAGATCGTATTCAGTTATTGTTAT
CAATCTTCACTGAAATGCCAGCAAGATTTCATTCTTtgttcataaaaaat
aaatttcaataattttaatttccccaatttttaaaatttacacTTGAAAC
ACAGTTATTTTCAATTTAGAACTAGAAGCATAATACAAAAGTTTCTCTTT
TCTGTATTCCAGTTTTACTTAATCATAGAACGTTGATTTATTTACAGATT
AAAAAAGAAGCATAATAATGACATCGACATTCCAATGGCCTTGGCAATAC
AACTTTCCACCTTTCTTTACCATACAACCAAACAATGCCACACAGGCTAA
ACAAATAGAAGCATGGCGAGCCTTGATATTGAGCTACTACAAACACAACA
AAGAGTACAGGCTTGATGTGACAGAAGCACATAActctgttttgtttaca
aatgaAAGTATCAAACGAAAGCTTGCCATGGAGGATATAGTGATGGTTTT
GGACACTTTGGCGAAAACTGGACACGTTGAGTGGGATAatgataaagaaa
aacaaaggtgTTTTGTGATGTGGCGCACACCTGATGAATGGGGGGAGCAA
ATTTACAAATGGATAGGGGATAATGGTATGTTGGATACAGTTTGTACTTT
ATATGAACTTCATTCTGGTGATGATACTACCAATGAGGAGTTTCATGGGA
TTGATATTAATGTGTTGTTAAAAGCGTTAGAAGCTCTTGAACGACGTGGT
AAAGCTCAAGTGTTTACAGCACAGGATCCTTCAGAAGTTGGTGTCAAGTT
CTTTGCATGAGGGAGAGTtatgtttctttttaaattcaatttagGAATAA
GATTCTGGAATCGAacttcaaattcaacaaaattctacaaaatttgaaga
atcttgcctttaatttgttatttttgaaactttgcttTGACCGTGTTTAT
TGAAGCTCGACGAATTTAAAGCACGGTGTACAAGCCCTTCTTAagcaatg
ggccattccattttatatccatacatgggGGTGGATGAACATATCCTGAT
GGTTATTCCAGGggatcttttttcatttttccgaggggataaaaagttat
tctaaaattttacGGGGTAaaagggtaaaagactgatttcagTTTGTCCA
CCTTCAATTTAAGGTAAGAAAAGAATCTTTCCAAAGGGTACTTAtgcaaa
tttcgcgattttccagggggtatcgacacattttgacttaaaaaggtttg
ttcacccccctgtatggttaa Coding sequence (CDS) from alignment at scaffold_344:55659..65579+ >TCONS_00060522 ID=TCONS_00060522|Name=TCONS_00060522|organism=Clytia hemisphaerica|type=CDS|length=543bp|location=Sequence derived from alignment at scaffold_344:55659..65579+ (Clytia hemisphaerica)
ATGACATCGACATTCCAATGGCCTTGGCAATACAACTTTCCACCTTTCTT
TACCATACAACCAAACAATGCCACACAGGCTAAACAAATAGAAGCATGGC
GAGCCTTGATATTGAGCTACTACAAACACAACAAAGAGTACAGGCTTGAT
GTGACAGAAGCACATAActctgttttgtttacaaatgaAAGTATCAAACG
AAAGCTTGCCATGGAGGATATAGTGATGGTTTTGGACACTTTGGCGAAAA
CTGGACACGTTGAGTGGGATAatgataaagaaaaacaaaggtgTTTTGTG
ATGTGGCGCACACCTGATGAATGGGGGGAGCAAATTTACAAATGGATAGG
GGATAATGGTATGTTGGATACAGTTTGTACTTTATATGAACTTCATTCTG
GTGATGATACTACCAATGAGGAGTTTCATGGGATTGATATTAATGTGTTG
TTAAAAGCGTTAGAAGCTCTTGAACGACGTGGTAAAGCTCAAGTGTTTAC
AGCACAGGATCCTTCAGAAGTTGGTGTCAAGTTCTTTGCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060522-exon-scaffold_344-1491911889:55659..55791 | TCONS_00060522-exon-scaffold_344-1491911889:55659..55791 | Clytia hemisphaerica | exon |
| TCONS_00060522-exon-scaffold_344-1510915933:55659..55791 | TCONS_00060522-exon-scaffold_344-1510915933:55659..55791 | Clytia hemisphaerica | exon |
| TCONS_00060522-exon-scaffold_344-1575043694:55659..55791 | TCONS_00060522-exon-scaffold_344-1575043694:55659..55791 | Clytia hemisphaerica | exon |
| TCONS_00060522-exon-scaffold_344-1491911889:64556..65579 | TCONS_00060522-exon-scaffold_344-1491911889:64556..65579 | Clytia hemisphaerica | exon |
| TCONS_00060522-exon-scaffold_344-1510915933:64556..65579 | TCONS_00060522-exon-scaffold_344-1510915933:64556..65579 | Clytia hemisphaerica | exon |
| TCONS_00060522-exon-scaffold_344-1575043694:64556..65579 | TCONS_00060522-exon-scaffold_344-1575043694:64556..65579 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_344 | supercontig | scaffold_344:55659..65579 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00060522 vs. Swiss-Prot (Human)
Match: VPS25 (Vacuolar protein-sorting-associated protein 25 OS=Homo sapiens GN=VPS25 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.648e-56 Identity = 88/179 (49.16%), Postives = 125/179 (69.83%), Query Frame = 1
Query: 154 MTSTFQWPWQYNFPPFFTIQPNNATQAKQIEAWRALILSYYKHNKEYRLDVTEAHNSVLFTNESIKRKLAMEDIVMVLDTLAKTGHVEWDNDKEKQRCFVMWRTPDEWGEQIYKWIGDNGMLDTVCTLYELHSGDDTTNEEFHGIDINVLLKALEALERRGKAQVFTAQDPSEVGVKFF 690
M +F+WPWQY FPPFFT+QPN T+ KQ+ AW +L+LS+ + +K+ + V EA S LF N ++RKL +E I +VL+ L K G++EW DK K +MWR P+EWG+ IY+W+ +G ++V TLYEL +G+DT +EEFHG+D LL+AL+AL++ KA++ T D GVKFF
Sbjct: 1 MAMSFEWPWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLFNNVKLQRKLPVESIQIVLEELRKKGNLEW-LDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGR--GVKFF 176
The following BLAST results are available for this feature:
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