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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060291 ID=TCONS_00060291|Name=TCONS_00060291|organism=Clytia hemisphaerica|type=transcript|length=1156bp
NNGGAATGCATAGAAACCTCCTCAGGACCGAATAATGAGTCATGGAGTGA
GATATGATCCAAAACACTCtatgattaattaatcctgaaatactccgaat
tttgagatttcaaatagctcattttaaagcccttcccaaatatcaataca
tatcaaaattttgggaaaattcatcatgcgaatgacgaaataattaaaat
aaagtgattttcacgattttcgaaaacctgattttggtacagtcaaaaaa
aacatgtccttaatGCAATCCTGGTGAAGAAGCCCGTGAATAAGATGCTG
GCAATGATGAATCAGAAGATTTTTGGAATCACCGGTGTCAATGGAATCAT
TTGAactaatcaatgatgaaatgaatAGTgcaaatgatgaaatcaatggt
tgATTCTTTCACCCGCACAATGGATTCCATCATCTCATCATGCTACAGCT
TTTATTCCATAATCTgctccattgattccatcatttgcaccattgattcc
atcatttgcactattgattccatcatttgcaccattgattccatcatttg
caccattgattccatcatttgcacctttgattccatcatttgcacCATCA
AAGCTGTAGCATGATGAGATGATGGAATCCATTGTGTGGGTGATAGAACc
aaccattgatttcatcatttgcactattgatttcatcattaatTAGTTCC
AATGATTCCAATGACACCGGTGGTTCCAAAAATCTCCACCATCACATCCT
TATTCTGGTTCATCATCGCCAGCATCTCATTCACAAGAAGCAATTTGTTC
GACGaagtaacaattttttttcattttcgtcgtcaatttttcattttcgt
cgtcaattttttagtttcgtcgtcattttttttcagtttcgtcGTCATCT
TTTTTAGTTTCgtcgttaaaaaattaaaggATAATCTAAATGGCACTAAT
GGGCTTCCGTACCTTAGTACGCAATTTTTTTACaattgatatatttttca
taaCGCTTTTTataattgtaatttttataGATTAAATTATTACCAGATAG
CTGACCATTATTTTTTTCAGTCTTATGCTTACTTTATACGAGATAACTGA
ATATTGAAATCAATTTAAATGACTTGGCCTAGTCTGGAGATTCATGCTCT
CTAACC Run BLAST on NCBI transcript from alignment at scaffold_339:234822..235977 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060291 ID=TCONS_00060291|Name=TCONS_00060291|organism=Clytia hemisphaerica|type=transcript|length=1156bp|location=Sequence derived from alignment at scaffold_339:234822..235977 (Clytia hemisphaerica)
GGTTAGAGAGCATGAATCTCCAGACTAGGCCAAGTCATTTAAATTGATTT
CAATATTCAGTTATCTCGTATAAAGTAAGCATAAGACTGAAAAAAATAAT
GGTCAGCTATCTGGTAATAATTTAATCtataaaaattacaattatAAAAA
GCGttatgaaaaatatatcaattGTAAAAAAATTGCGTACTAAGGTACGG
AAGCCCATTAGTGCCATTTAGATTATcctttaattttttaacgacGAAAC
TAAAAAAGATGACgacgaaactgaaaaaaaatgacgacgaaactaaaaaa
ttgacgacgaaaatgaaaaattgacgacgaaaatgaaaaaaaattgttac
ttCGTCGAACAAATTGCTTCTTGTGAATGAGATGCTGGCGATGATGAACC
AGAATAAGGATGTGATGGTGGAGATTTTTGGAACCACCGGTGTCATTGGA
ATCATTGGAACTAattaatgatgaaatcaatagtgcaaatgatgaaatca
atggttgGTTCTATCACCCACACAATGGATTCCATCATCTCATCATGCTA
CAGCTTTGATGgtgcaaatgatggaatcaaaggtgcaaatgatggaatca
atggtgcaaatgatggaatcaatggtgcaaatgatggaatcaatagtgca
aatgatggaatcaatggtgcaaatgatggaatcaatggagcAGATTATGG
AATAAAAGCTGTAGCATGATGAGATGATGGAATCCATTGTGCGGGTGAAA
GAATcaaccattgatttcatcatttgcACTattcatttcatcattgatta
gtTCAAATGATTCCATTGACACCGGTGATTCCAAAAATCTTCTGATTCAT
CATTGCCAGCATCTTATTCACGGGCTTCTTCACCAGGATTGCattaagga
catgttttttttgactgtaccaaaatcaggttttcgaaaatcgtgaaaat
cactttattttaattatttcgtcattcgcatgatgaattttcccaaaatt
ttgatatgtattgatatttgggaagggctttaaaatgagctatttgaaat
ctcaaaattcggagtatttcaggattaattaatcataGAGTGTTTTGGAT
CATATCTCACTCCATGACTCATTATTCGGTCCTGAGGAGGTTTCTATGCA
TTCCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060291-exon-scaffold_339-1491911889:234822..235977 | TCONS_00060291-exon-scaffold_339-1491911889:234822..235977 | Clytia hemisphaerica | exon |
| TCONS_00060291-exon-scaffold_339-1510915933:234822..235977 | TCONS_00060291-exon-scaffold_339-1510915933:234822..235977 | Clytia hemisphaerica | exon |
| TCONS_00060291-exon-scaffold_339-1575043694:234822..235977 | TCONS_00060291-exon-scaffold_339-1575043694:234822..235977 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_339 | supercontig | scaffold_339:234822..235977 . |
Blast
The following BLAST results are available for this feature:
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