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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060290 ID=TCONS_00060290|Name=TCONS_00060290|organism=Clytia hemisphaerica|type=transcript|length=1032bp
GGTttagatatttttgttttggtatCTTATGGATATTGCAGAAATAgtat
gtacaaaatataaattcatcaacaaataaattataaaacTTTACAGGTCA
TTAAATGGTATGTTCAATATACCCCCATTCCGGTTAAtttatttttggga
aaatgtttttaaaattcccTCTTTTAATTCGGCTGCATTAGcctccttta
aaaaaattttccatccagaaTCCAGGACAAATTCCACCCTCCCCCGCACC
TCttccccggctattaggtacccgagaatatactcaaatttttgtcccca
ctaaaAATTATCACATAAACCCATCCTCAATGCATGCTGAAAATTATGCT
AGCTGGctctgaaaaaatcctaccgagtctatgagaagggggtgtgtttG
CCATAACTTCTTTCACTCTGCATCCCATGGTATTAATAATCCCTTTTACT
TACGCCGAAAAATCAAAATccttcaaaaaataagaaacttcAAGACACAA
ATGAGCCTCATTTTGGTTAATTTACACattagacagctccaggcttctTG
AACTTACTCTTGGTCTGTATGCACTACTATAGAGGCAGCCACTACGGTAG
TGACCCCACTGAAAATTCGCCCACTAATAGGActaaaaaaatcttaaagt
tCTTAACAAAGGAAGTTTAACAAAAGAGGTTTTAACGAAAAGAATgatta
aaatatgaaaattggcTTAGGTTTCAAATAACTCTGTTTTATGAAAACCT
CAGTATGCATGCATCAATATTCAAAAGCAGAGCAGTGCACGTTTCCCGAA
GAATAAGAATTTTACGCTATCGAAACGAACATTGGAAATTgtaaaacccc
aaaataaggtaaatataggctaaaatcatgacatttagagcagaataagg
gaccttctctttgaaagctgaaaaaattcttctaTGGAAATTTATCACAT
TATTATAAAAAAGGGGTAAGATCCGGGGGGCACTGAAATGGTCCGACCTA
CGGCATGTACCGCCCTCAAGGGTAAGTTTTTG Run BLAST on NCBI transcript from alignment at scaffold_339:171258..172289 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060290 ID=TCONS_00060290|Name=TCONS_00060290|organism=Clytia hemisphaerica|type=transcript|length=1032bp|location=Sequence derived from alignment at scaffold_339:171258..172289 (Clytia hemisphaerica)
CAAAAACTTACCCTTGAGGGCGGTACATGCCGTAGGTCGGACCATTTCAG
TGCCCCCCGGATCTTACCCCTTTTTTATAATAATGTGATAAATTTCCAta
gaagaattttttcagctttcaaagagaaggtcccttattctgctctaaat
gtcatgattttagcctatatttaccttattttggggttttacAATTTCCA
ATGTTCGTTTCGATAGCGTAAAATTCTTATTCTTCGGGAAACGTGCACTG
CTCTGCTTTTGAATATTGATGCATGCATACTGAGGTTTTCATAAAACAGA
GTTATTTGAAACCTAAgccaattttcatattttaatcATTCTTTTCGTTA
AAACCTCTTTTGTTAAACTTCCTTTGTTAAGaactttaagatttttttag
TCCTATTAGTGGGCGAATTTTCAGTGGGGTCACTACCGTAGTGGCTGCCT
CTATAGTAGTGCATACAGACCAAGAGTAAGTTCAagaagcctggagctgt
ctaatGTGTAAATTAACCAAAATGAGGCTCATTTGTGTCTTgaagtttct
tattttttgaaggATTTTGATTTTTCGGCGTAAGTAAAAGGGATTATTAA
TACCATGGGATGCAGAGTGAAAGAAGTTATGGCaaacacacccccttctc
atagactcggtaggattttttcagagCCAGCTAGCATAATTTTCAGCATG
CATTGAGGATGGGTTTATGTGATAATTtttagtggggacaaaaatttgag
tatattctcgggtacctaatagccggggaaGAGGTGCGGGGGAGGGTGGA
ATTTGTCCTGGAttctggatggaaaatttttttaaaggaggCTAATGCAG
CCGAATTAAAAGAgggaattttaaaaacattttcccaaaaataaaTTAAC
CGGAATGGGGGTATATTGAACATACCATTTAATGACCTGTAAAgttttat
aatttatttgttgatgaatttatattttgtacatacTATTTCTGCAATAT
CCATAAGataccaaaacaaaaatatctaaACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060290-exon-scaffold_339-1491911889:171258..172289 | TCONS_00060290-exon-scaffold_339-1491911889:171258..172289 | Clytia hemisphaerica | exon |
| TCONS_00060290-exon-scaffold_339-1510915933:171258..172289 | TCONS_00060290-exon-scaffold_339-1510915933:171258..172289 | Clytia hemisphaerica | exon |
| TCONS_00060290-exon-scaffold_339-1575043694:171258..172289 | TCONS_00060290-exon-scaffold_339-1575043694:171258..172289 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_339 | supercontig | scaffold_339:171258..172289 . |
Blast
The following BLAST results are available for this feature:
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