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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005944 ID=TCONS_00005944|Name=TCONS_00005944|organism=Clytia hemisphaerica|type=transcript|length=559bp
GGTGAACTGCACCCTAATTCAATTAGATTAAATTACTTttaacaaaacat
tcaaaatacaaaaagaactTATATGTAGgacaattatattttttattgca
tcGCAAATGACTTGTATTTATATTCCCTAGGCAATTATCGTAGGCAATTA
TCGCTAGatattatatcaattttttacaatttcaatTCAACTCAATCATT
CAATTCTGAAACTTACACAAGAAGGATGTACGTGGAAGATGTTGAGATGC
GTTTTTAGATACAAGTTTTAGAGTTCAATTTCAAGTtcaatcttttatca
atcatttCATGTACCTGTATTCACTTgccttcaaatttggcatgtggcTA
TCCGtttgaacataatcAACCAGTTACAAACGGAAGCTGACTCCAATCTT
TGCTCAAATTCCCCAACATTCAAACGGAGTCCTACGTCATTCAACGGGAA
CCCGCCCATTCAATTTCAAACACACGGAATCGTTCATCAATCCAAGCGAA
CATCCGTCTTATCAATCGGTGATCCATTCAGTCAATTTGGTGATCCACTC
AACAACGTC Run BLAST on NCBI transcript from alignment at sc0000061:813654..814608- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005944 ID=TCONS_00005944|Name=TCONS_00005944|organism=Clytia hemisphaerica|type=transcript|length=955bp|location=Sequence derived from alignment at sc0000061:813654..814608- (Clytia hemisphaerica)
GGTGAACTGCACCCTAATTCAATTAGATTAAATTACTTTTAACAAAACAT
TCAAAATACAAAAAGAACTTATATGTAGGACAATTATATTTTTTATTGCA
TCGCAAATGACTTGTATTTATATTCCCTAGGCAATTATCGTAGGCAATTA
TCGCTAGATATTATATCAATTTTTTACAATTTCAATTCAACTCAATCATT
CAATTCTGAAACTTACACAAGAAGGATGTACGTGGAAGATGTTGAGATGC
GTTTTTAGATACAAGTTTTAGAGTTCAATTTCAAGTTCAATCTTTTATCA
ATCATTTCATGTACCTGTATTCACTTGCCTTCAAATTTGGCATGTGGCTA
TCCGGTACGTTTGCCTCTTTGTTTGCCTTTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTAGGTCTGGACATTAGGCTAGGTCATTTTTAGGCATGTTTTTTG
TTAGTCAAATTTAAGTTCATTTATTGCATTCAATTATTGTCAATAATAAA
TTTTCTCTAGTTTATTTTCTAATTGTATTTTTTTTCAATCAATTTTTCAG
TTTGAACATAATCAACCAGTTACAAACGGAAGCTGACTCCAATCTTTGCT
CAAATTCCCCAACATTCAAACGGAGTCCTACGTCATTCAACGGGAACCCG
CCCATTCAATTTCAAACACACGGAATCGTTCATCAATCCAAGCGAACATC
CGTCTTATCAATCGGTGATCCATTCAGTCAATTTGGTGATCCACTCAACA
ACGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005944-exon-sc0000061-1575043694:814255..814608 | TCONS_00005944-exon-sc0000061-1575043694:814255..814608 | Clytia hemisphaerica | exon |
| TCONS_00005944-exon-sc0000061-1575043694:813654..813858 | TCONS_00005944-exon-sc0000061-1575043694:813654..813858 | Clytia hemisphaerica | exon |
| TCONS_00005944-exon-sc0000061-1510915933:814255..814608 | TCONS_00005944-exon-sc0000061-1510915933:814255..814608 | Clytia hemisphaerica | exon |
| TCONS_00005944-exon-sc0000061-1510915933:813654..813858 | TCONS_00005944-exon-sc0000061-1510915933:813654..813858 | Clytia hemisphaerica | exon |
| TCONS_00005944-exon-sc0000061-1491911889:814255..814608 | TCONS_00005944-exon-sc0000061-1491911889:814255..814608 | Clytia hemisphaerica | exon |
| TCONS_00005944-exon-sc0000061-1491911889:813654..813858 | TCONS_00005944-exon-sc0000061-1491911889:813654..813858 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061 | supercontig | sc0000061:813654..814608 - |
Blast
The following BLAST results are available for this feature:
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