TCONS_00059825 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059825
Unique NameTCONS_00059825
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1212

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059825 ID=TCONS_00059825|Name=TCONS_00059825|organism=Clytia hemisphaerica|type=transcript|length=1212bp
GATTTCCAATACAAGTTGGGATTGAAAATTCTCCAAAAAAATGTCTGGAT
TTAAAAAGCTTAATTCTAAAGAGagAGAGGTACTTATCAAGCAAATTCAG
GCGTTTCTACAAGTGTTTCATTTGATATTGTGTGTTGTCATTTTCGCACT
CATTGTTGGAGCGATTTGTGGCAATGGATGGCTTTATAACATGACCGAGA
AAACATTGTATCAGGATACTGAAAAATTCATTGGATTATGGCAAACATGT
ACAAATGTGTATGATTATGGATGTCCAACTGAGAGTTGTGTCAACTCTGG
TAGTGATGCTGAAGATTACATTCAAGCAACACGAGCATTTCTGATTCTGG
CAACTCTACCATCAATTTTTGCTTTTATTGGTGGAATTGGTATGTTATGT
TCAGATCGTGTCAAAGGTCAAGTATCCGCTATTTGCCACATCATCACAGG
TGTATTTTTACTTATCGGGATGGCAGTGTATACAGCTAAGGTGAATGAAG
AAGATTCATTCGATCTTTATAAATACAGTTGGTCATTTGTTTTCGGTTGG
GTAGCATTCGTGTTGACCCTCATTGCTGCTGTAATCACTTTCACATTTGG
TGCTCCAAAATTACCGAGAATCATTATCGAGTTCAGAGAATAATTATTGT
AACAATATTCATTGCTTGTTTTCGAGATTAATAAATGGCTTTGGAAAGCG
GTGGATGGAGTGATAACGTGAAATTTAGAATGAGAaataatagatcttat
cggagtttttgatttttttaaaaaagcgatGCCTGGGATTGTTTCTataa
caatagaaatctcttaggaattcctcgagggaattctattgtaatacccc
cgaaccAATCCCACAttgcatcgctgttttagaagaataaaaaactccga
taaggtctattgaaacAGGTGTCAAGACATCATTCATATCATATCATGTC
CATAACATCCATAATATGTTAAATATGGAAGCTAAAATAATCTCGGACAT
CTCAGAGTTGTAATCGAGCTGAGCAACTGGTCATAAGAGTACCAGAGATT
GAAAGGCATCGCGTATAACATTTCTTTATAATGGATTTGAATATTCTTGC
GTTGCTTGTGATGAGCAATGActattaaataattttcaaaatcacaTACT
GTATATAGATCCCGCGGGGGCACTGACCTTAACGGCCGACGGAGACGTGc
ccggtggggggg
Run BLAST on NCBI

protein sequence of TCONS_00059825-protein

>TCONS_00059825-protein ID=TCONS_00059825-protein|Name=TCONS_00059825-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MSGFKKLNSKEREVLIKQIQAFLQVFHLILCVVIFALIVGAICGNGWLYN
MTEKTLYQDTEKFIGLWQTCTNVYDYGCPTESCVNSGSDAEDYIQATRAF
LILATLPSIFAFIGGIGMLCSDRVKGQVSAICHIITGVFLLIGMAVYTAK
VNEEDSFDLYKYSWSFVFGWVAFVLTLIAAVITFTFGAPKLPRIIIEFRE
Run BLAST on NCBI

transcript from alignment at scaffold_331:676299..685200+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059825 ID=TCONS_00059825|Name=TCONS_00059825|organism=Clytia hemisphaerica|type=transcript|length=8902bp|location=Sequence derived from alignment at scaffold_331:676299..685200+ (Clytia hemisphaerica)
GATTTCCAATACAAGTTGGGATTGAAAATTCTCCAAAAAAATGTCTGGAT
TTAAAAAGCTTAATTCTAAAGAGGTAAGTCTattaattataattttaatt
attttcaaaatattgtgaaattttattgattcattgatatttttttcctt
cctAGGCGGGTCAAGTGGTATATTTTGACATCTGTTTGTCTAAAATGTtg
taaacttttttatttcgGGATTTTTGGAGTTTTGGCGGAACTAACTTCGG
AACTAAATTTCggaatattttattatttgtgACTTTAATATGAAAGagaa
tcaagaaaaaaaacttagGGTAAATAATGTTTATCTTACTTTAATATTCT
TTATATTCTATTTCtaaatttgacatatttttccTAAATTATAACATAAT
CGACATCTTAAGGCCTTAAGATTTGTTGATACAGTAGCGCTAAAGATTTA
ACTGATATCAGATTTTTACCAATACCAAGAAGATTTTAACTTTCTACGAT
GATGAAGTCGCAACAGATTAAAATAAGGCAAAACGTGAATTTATATTGTG
GCTGCCATTCTTACAGTGATTTAGAACGGTTTAATAAAGAGGTACCTTAA
AGGCCGTTTTCCACTTTCGCGCAAAATGGACCGTTTTTTCCTCAAccgtt
tttgcctgaagaaaagattacgtcatataaaAGTTTTGTGCGAACAAAAA
ATTTCACTCATTTCGCACGATAGTGGAGACCGGCCTCACGTACAAACCTT
GTGAAAATCTTTCCTACAGTGGAAATGAAAATCCAGTGGTAAtagcaaag
atttattatacactggataaacgactcataaaacgatggagagcgatcat
tgtattttcattgtttcagaaaacaattgatgttcaagCTTTGTCCGCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNtgtctgatttttaaaaatgtttatcagtcttatttttaaaaagttctc
tagctctttctttttgtacatttgcagaaaaaaaagtttgaaagtaaggc
taacATTCCAAGCTGGATctatttgtgaaatctaatgtgagaaaaacatc
attagacaagaaattcagacaaaatgcttacagtgacacgaaattttcaa
ttggaaatatatttccaagactgtccccagaagaactgaaattaacatac
ataagacttatatgtcttggctccactgtggtatgaaaatcctttggagg
cacgtggtggcaaggtggtttttttgaggttaaagtttgaaaatttctgg
tgtcaacattaaatttcctatacacaacacgtcttttgcatctttcttac
agcttgaaacgtcataacgacttatcattagcaattaagtggaagaatct
gactctcacaggaaagttttaagtctcttttgggaattggatgagtgatt
ttcgataagaaaggccataaaaatgtttcgaaaaatcatttaatgaggga
aggagagtgaacaataacatcattactgcggacatagctagtacacgaga
aatcggcaaaaatatattacttgtatatccagtgtatattAAATCCTTGG
TAATAGTTTTGCAGTTGATTTTTtcccattgaatttcaaatggagataaa
ataaaattcaatttcccagtggggctattTTCCCATaggagatgaaattt
tgaccgtatcttttccagggggtctgtgAAACGAGGGTGTTGATGAGCGT
CAAAACAGAGTACTGTTTGACAGAGCCTATAGCATCGAGAGACAATCGTT
GTTTGAGGATTGATGTATCAACACGTTCTATAACCTTTTCTTCAAAGTTT
TCACTTTCAGAGCTCCTATAGCATTTGAATGTCAACTTGCATACGATAAT
TAACTTTAACTTcttatgttttgttttcttcaattttagagAGAGGTACT
TATCAAGCAAATTCAGGCGTTTCTACAAGTGTTTCATTTGATATTGTGTG
TTGTCATTTTCGCACTCATTGTTGGAGCGATTTGTGGCAATGGATGGCTT
TATAACATGACCGAGGTAACTTTTGTTTCCATTTTCCCGGTTCAAATGTA
TTCCTCATTCATTTATGGTTAAACCCTGTCATAGTTTCAGGGGGTACTGT
AGGCTACACTCGTCCCCTCTAATATGTTTAGATATAGGGGATgtgtatcg
tgtataaaattcccgtgcGAGGGTTACCCTCTTTACCCACCTTGTGTTTT
TtggttttagaaacttgattatcTTTATTAGTCAGCTTTATTTGAGAGAt
cattaaatttgaattgaaaatttgatcGAATAGAAGTTAGcacaatcatt
ggatttctaaacctctttaagaaaattgaaacagataaatttgaaataac
GCCCGGGACAGGAATTTTATTACCCTtaatcaaaacatatcagaggtgAC
GCATGCAGCCTAGGGGTAATGtctattttaaaaattgattgcACTTCGTA
ATGATTCTCATACAAGAAACACTTCGAATTGGGGGCTACCCACATTTAGT
AAGCATGGAAGGGGGGTGCTAGGTTTGCGAAGTAACAGGTATGACAAGTC
AAAAAGTGAAAATCctttaaaacaaaagttattgaaattttttgagaccc
ttttagagaatttttgtcaaaattttggacaactttttcagaaaatagtg
ACCCTTTGAGAAGGAAATTTTCGCTTttagtgattttgggaccctttgag
agactaacCTATGAATATGTAGCCCTTTTAGGGACTTTTGAGGCATGAAA
AAGGATACATATACCACCTGTTTTttcctaagtaccccccccccgggtta
acATGATAAGATCTTTTGCATCCTACAtagattatgattttttgattttg
atattacaGAAAACATTGTATCAGGATACTGAAAAATTCATTGGATTATG
GCAAACATGTACAAATGTGTATGATTATGGATGTCCAACTGAGAGTTGTG
TCAACTCTGGTAGTGATGTTGAAGGTAATTATTCGTCATTTTCGGTCTCA
AAAAAGCTTTATTATTGACAGCTGCACTTGTAAACACattgaattgaatt
tcaataatgGGGTGGAATGAAAGTTGATTTCCCAATGGGGCTTAAATTGT
AGGGTTTTTTCCCCACTGGGGAacaaaatttgggccaaattttcAAGTGG
GCTATGCTATGGGCACCGGGTTATGTGACACAATAGACCTTATCATAAAT
TACTTGCTTCGCATTCAAACAGATTCCAAATGATTTTATTATGAATAGAA
GGTAGTTGTGATAGTTGtaataaaatccactgggagttaGCCAGCAtgga
aataatttcaaaacgaggcagtggTATTCgggacgtaatttatgaaaagg
tctattcttgaATAGATAATTCATTCATCCTTAATCAAATACAACCTTCT
CCAGTCCTCAAATCTTAAAATTGAGAGTGTAGTAAAATTCCAATACAGTA
GTTAGACGTTGGATAGAGCCTGCTATAAGTTAGTAGATTCTACTTTtgga
tttttgataatttttttatgacgctgagtccagtgacgtagactaggagc
atttggcgaggtcgcctttttcaaaaaaaaatgttgaaaatccaaattca
tgatatgcaccactggagagtcttccgagaattttcaaaatattcaaccc
aatacgtcacttaaacaatagaaaaagtgacgtattgggttgaaTATTTC
GAAAGATGTAGGAATACTCTCcggtggtgcatatcatgaataacaataaa
actacttggagttgaaagatataatcaataattagaaacaaacacgatta
acagatttgcgatcccttattctcaaataaaaacattgctccatactgtt
tttaccttccaaaagcaactaaaatctggcggactgttttacattccgcc
taagcaaaagaatattaccatatactaccggacCACTTAAttgcgccatc
cagtctatcaaaaagatttaagtggaccccgggctagctATAAGTTGGat
tgaaatcaaaagaaaaatgaaattgaagtGGTTTTGAGTGCAGAGTCAGC
CACCTGGTTTCTACCATCAACCTCTTATTTTCCTCAAANTACTGAAAAAT
TCATTGGATTATGGCAAACATGTACAAATGTGTATGATTATGGATGTCCA
ACTGAGAGTTGTGTCAACTCTGGTAGTGATGCTGAAGGTTGTTATACGTC
ATTTTCGGTCTCAAAAAAGCTTTATTATTGACAGCTGCACTTGTAAACAC
ATTGCATTGAATTTCAATAATGGGGTGGAATGAAAGTTGATTTCCCAATG
GGGCTTAAATTGTAGGGTCTTTTCCCCACTGGGGATcaaaatttgggcaa
aattttCAAGTGGGCTATGCTATGGGCACCGGGTTATGTGACACGtagac
attttcataaattacttgcTTCGCATTCAAACACGGTGATCATacccctt
gagacattaaaaatgattttattatgaatagaaagtagttgtaatagttg
taataaaatccactgggagttaGCCACCAtggaaataatttcaaaacgag
gcagtggtgtccgtgacgtaatttatgaaaaggtctattcttgaATAGAT
AATTCATTCATCCTTAATTAAATACAACCTTCTCCAGTCCTCAAATCTTA
AAATTGAGAGTGTAGTAAAATTCCAATACAGAAGTTAGACGTTGGATAGA
GCCTGCTATAAGTTAGTAGATTCTACTTTtggctttttgataatttttta
tgacgctgagtctaGTGacgtagactaggagcatttggcgaggtcgcctt
tttgaaaaaaaaaatgttgaaaatcatgaataacaataaaactacttgga
gttgaaagatacaatcaaaaatcagaaacaaacacgattaacagatttgc
gatcccttattctcaaataaaaacattgcttcatactgtttttaccttcc
aaaaacaactaaaatctggcggactgttttacagtccgcctaagcaaaag
aatattaccatatactatcGGGCCACTTAAttgcgccatccagtctatca
aaaagctttaagtggaccccgggctagctATAAGTTGGattgaaatcaaa
agaaaaatgaaatcgaAGGGGTTTTGATTGCAGAGTCAGCCACTCCTTTT
CTACCATCAACTTCTTATCTTCCTCAAACCATCCATTACCTTAATGTTAT
AGATTACATTCAAGCAACACGAGCATTTCTGATTCTGGCAACTCTACCAT
CAATTTTTGCTTTTATTGGTGGAATTGGTATGTTATGTTCAGATCGTGTC
AAAGGTCAAGTATCCGCTATTTGCCACATCATCACAGGTAAATATCATTG
TGAAACCTGATCTAACCATCAGACCCCTGTAATCAGGGGATGATTCAGCA
AATTCGTCCATTTACTTCATATAGGAGAATCAAGATTTTAACTAACTCTT
TGCTCCTTTAAGATATTTGTCGCGTCTAGCAagcagtggcgtggtggcag
gggggccagggggccaggccccccccagcggagcccttttgagaaggggc
gcccaaaaataagggacgccaagaaggatttttcaggcgcccatatcgaa
aaattgacaaatgaaaaaacaaaaatggcgtcctcatcacctcaaaaact
caaaattttctggctcgcttcgctcgcacactcccttttttgtgttcata
atgagcgtatagagaggggcgccaaaaacaaaaaatcagagaaattttcc
caccacgccactgctgGCAAGTTTAAAGGTTTCTAAAATCGAATATGATT
TCAGTTTCTCACATCACAtattaaaatgtgttttttcaGCCCTTAATATT
GAAATGTCTATCTGACACCAAAAACCATTTTCGCAACCGCAGGGAGTGTT
AAAAGACTACTGGTAACAAAGCCTACATCGTATTaagaaaaaccctattt
ttgttTATGGTAGTGGGCCTACGTTTGTGTAACTTCTGTGTAAATCCTAT
CAGCCCGGACCCCCCTCTATATTACTGTGACCCCTGAGTTTATAACCTGG
TTTAATTTCATATTTAGGTGTATTTTTACTTATCGGGATGTCAGTGTACA
CCGCTAAGGTGAATGAAGAAGATTCATTCGATCTTTATAAATACAGTTGG
TCATTTGCTTTCGGTTGGGTAGCATTCGTGTTGACCCTCATTGCTGCTGT
AATCACTTTCACATTTGGTGCTCCAAAATTACCGAGAATCATTATCGAGT
TCAGAGAATAATTATTGTAACAATATTCATTGCTTGTTTTCGAGATTAAC
AAATGGCTTTGGAAAGCAGTGGATGGAGTGATAACGTGAAATTTAGAATG
AGAaataatagatcttatcggagtttttgatttttaaaaaaaagcgaTGC
CTGGGATTGTTTCTataacaatagaaatctcttaggaattcctcgaggga
attctattgtaatacccccgaaccAATCNtgtttggttgggcgattttgc
gccctttgacacgtttttagcgccttctataagtgcaatgtaattttttt
ttcgcctgcggcgcttcattcattttattttacgatttttttcaaaacta
ctatcaacattgaattgcgaaaagtaaaagcaagagaagtgttgtgtatc
caccaggggttaaagaggatgctcatcCCCAAAATcagagattgatcgaa
actgctcgctgtggtttttgtggtcttatgcgggTTAAccttctcctttt
tagaatatcttataagctgtttgacctttcttgcACCAAATTcttttgcc
tgcggcgctagaattacaaagaacccttattcttgccaacttttgaattt
ttggggcctctttcagccattgatcttNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNaatttttttgcctgcggcgctagaattaca
aagaacccttattcttgccaactttcgaatttttggggcctctttcagcc
attgatctttaatggagagtacAGGTAATAACAAGTATAATAACAAGTAA
TAACAAGTACCAGGtaataacaaggaaatagatatcaaattatcattacc
accaccttcgtataaataaaactttgttaactcagagattccgggcgtta
ctttcaaccagtcactgctcttaccaGTTTAacgaggccccccagcggca
cccctaatcacgccatcacgcaaaaaaaatttctccatcacgcatcacaa
AAATCGATAatatagcgaaaaatagcccaaatcacgcatcacgcctcaaa
tttttgccctatcacgcatcacgccaaattcttgatcacgccatcacgcc
aaaaaaaatgtttaatcacgccatcatgcaagaaaaaagtcccaatcacg
ccatcacgcaaaccgccgGGGGGAGGCCTCTTTAAAAGTTTCACTTACTG
Gtagagggcgcaaataaggacaaaaatactaggggcgccaatttcatagt
ttgcaccaccaagaaaattaagccaggccgctactgctGTAATCAGGGAT
GATTCAGCAAATTCGTCCATTTACTTCATATAGGAGAATCAAGATTTTAA
CTAACTCTTTGCTCCTTTAAGATATTTGTCGCGTCTGGCAAGTTTAAAGG
TTTCTAAAATCGAATATGATTTCAGTTTCTCACATCACAtattaaaatgt
gttttttcaGCCCTTAATATTGAAATGTCTATCTGACACCAAAAACCATT
TTCGCAACCGCAGGGAGTGTTAAAAGACTACTGGTAACAAAGCCTACATC
GTATTaagaaaaaccctatttttgttTATGGTAGTGGGCCTACGTTTGTG
TAACTTCTGTGTAAATCCTATCAGCCCGGACGCTCCATATTACTGTGACC
CCTGAGTTTATAACCTGGTTTAATTTCATATTTAGGTGTATTTCTACTTA
TCGGGATGGCAGTGTATACAGCTAAGGTGAATGAAGAAGATTCATTCGAT
CTTCATAAATACAGTTGGTCATTTGTNAAGGTGAATGAAGAAGATTCATT
CGATCTTTATAAATACAGTTGGTCATTTGTTTTCGGTTGGGTAGCATTCG
TGTTGACCCTCATTGCTGCTGTAATCACTTTCACATTTGGTGCTCCAAAA
TTACCGAGAATCATTATCGAGTTCAGAGAATAATTATTGTAACAATATTC
ATTGCTTGTTTTCGAGATTAATAAATGGCTTTGGAAAGCGGTGGATGGAG
TGATAACGTGAAATTTAGAATGAGAaataatagatcttatcggagttttt
gatttttttaaaaaagcgatGCCTGGGATTGTTTCTataacaatagaaat
ctcttaggaattcctcgagggaattctattgtaatacccccgaaccAATC
CCACAttgcatcgctgttttagaagaataaaaaactccgataaggtctat
tgaaacAGGTGTCAAGACATCATTCATATCATATCATGTCCATAACATCC
ATAATATGTTAAATATGGAAGCTAAAATAATCTCGGACATCTCAGAGTTG
TAATCGAGCTGAGCAACTGGTCATAAGAGTACCAGAGATTGAAAGGCATC
GCGTATAACATTTCTTTATAATGGATTTGAATATTCTTGCGTTGCTTGTG
ATGAGCAATGActattaaataattttcaaaatcacaTACTGTATATAGAT
CCCGCGGGGGCACTGACCTTAACGGCCGACGGAGACGTGcccggtggggg
gg

Coding sequence (CDS) from alignment at scaffold_331:676299..685200+

>TCONS_00059825 ID=TCONS_00059825|Name=TCONS_00059825|organism=Clytia hemisphaerica|type=CDS|length=4824bp|location=Sequence derived from alignment at scaffold_331:676299..685200+ (Clytia hemisphaerica)
ATGTCTGGATTTAAAAAGCTTAATTCTAAAGAGagAGAGGTACTTATCAA
GCAAATTCAGGCGTTTCTACAAGTGTTTCATTTGATATTGTGTGTTGTCA
TTTTCGCACTCATTGTTGGAGCGATTTGTGGCAATGGATGGCTTTATAAC
ATGACCGAGAAAACATTGTATCAGGATACTGAAAAATTCATTGGATTATG
GCAAACATGTACAAATGTGTATGATTATGGATGTCCAACTGAGAGTTGTG
TCAACTCTGGTAGTGATGCTGAAGATTACATTCAAGCAACACGAGCATTT
CTGATTCTGGCAACTCTACCATCAATTTTTGCTTTTATTGGTGGAATTGG
TATGTTATGTTCAGATCGTGTCAAAGGTCAAGTATCCGCTATTTGCCACA
TCATCACAGGTGTATTTTTACTTATCGGGATGGCAGTGTATACAGCTAAG
GTGAATGAAGAAGATTCATTCGATCTTTATAAATACAGTTGGTCATTTGT
TTTCGGTTGGGTAGCATTCGTGTTGACCCTCATTGCTGCTGTAATCACTT
TCACATTTGGTGCTCCAAAATTACCGAGAATCATTATCGAGTTCAGAGAA
TAAATGTCTGGATTTAAAAAGCTTAATTCTAAAGAGagAGAGGTACTTAT
CAAGCAAATTCAGGCGTTTCTACAAGTGTTTCATTTGATATTGTGTGTTG
TCATTTTCGCACTCATTGTTGGAGCGATTTGTGGCAATGGATGGCTTTAT
AACATGACCGAGAAAACATTGTATCAGGATACTGAAAAATTCATTGGATT
ATGGCAAACATGTACAAATGTGTATGATTATGGATGTCCAACTGAGAGTT
GTGTCAACTCTGGTAGTGATGCTGAAGATTACATTCAAGCAACACGAGCA
TTTCTGATTCTGGCAACTCTACCATCAATTTTTGCTTTTATTGGTGGAAT
TGGTATGTTATGTTCAGATCGTGTCAAAGGTCAAGTATCCGCTATTTGCC
ACATCATCACAGGTGTATTTTTACTTATCGGGATGGCAGTGTATACAGCT
AAGGTGAATGAAGAAGATTCATTCGATCTTTATAAATACAGTTGGTCATT
TGTTTTCGGTTGGGTAGCATTCGTGTTGACCCTCATTGCTGCTGTAATCA
CTTTCACATTTGGTGCTCCAAAATTACCGAGAATCATTATCGAGTTCAGA
GAATAAATGTCTGGATTTAAAAAGCTTAATTCTAAAGAGagAGAGGTACT
TATCAAGCAAATTCAGGCGTTTCTACAAGTGTTTCATTTGATATTGTGTG
TTGTCATTTTCGCACTCATTGTTGGAGCGATTTGTGGCAATGGATGGCTT
TATAACATGACCGAGAAAACATTGTATCAGGATACTGAAAAATTCATTGG
ATTATGGCAAACATGTACAAATGTGTATGATTATGGATGTCCAACTGAGA
GTTGTGTCAACTCTGGTAGTGATGCTGAAGATTACATTCAAGCAACACGA
GCATTTCTGATTCTGGCAACTCTACCATCAATTTTTGCTTTTATTGGTGG
AATTGGTATGTTATGTTCAGATCGTGTCAAAGGTCAAGTATCCGCTATTT
GCCACATCATCACAGGTGTATTTTTACTTATCGGGATGGCAGTGTATACA
GCTAAGGTGAATGAAGAAGATTCATTCGATCTTTATAAATACAGTTGGTC
ATTTGTTTTCGGTTGGGTAGCATTCGTGTTGACCCTCATTGCTGCTGTAA
TCACTTTCACATTTGGTGCTCCAAAATTACCGAGAATCATTATCGAGTTC
AGAGAATAAATGTCTGGATTTAAAAAGCTTAATTCTAAAGAGagAGAGGT
ACTTATCAAGCAAATTCAGGCGTTTCTACAAGTGTTTCATTTGATATTGT
GTGTTGTCATTTTCGCACTCATTGTTGGAGCGATTTGTGGCAATGGATGG
CTTTATAACATGACCGAGAAAACATTGTATCAGGATACTGAAAAATTCAT
TGGATTATGGCAAACATGTACAAATGTGTATGATTATGGATGTCCAACTG
AGAGTTGTGTCAACTCTGGTAGTGATGCTGAAGATTACATTCAAGCAACA
CGAGCATTTCTGATTCTGGCAACTCTACCATCAATTTTTGCTTTTATTGG
TGGAATTGGTATGTTATGTTCAGATCGTGTCAAAGGTCAAGTATCCGCTA
TTTGCCACATCATCACAGGTGTATTTTTACTTATCGGGATGGCAGTGTAT
ACAGCTAAGGTGAATGAAGAAGATTCATTCGATCTTTATAAATACAGTTG
GTCATTTGTTTTCGGTTGGGTAGCATTCGTGTTGACCCTCATTGCTGCTG
TAATCACTTTCACATTTGGTGCTCCAAAATTACCGAGAATCATTATCGAG
TTCAGAGAATAAATGTCTGGATTTAAAAAGCTTAATTCTAAAGAGagAGA
GGTACTTATCAAGCAAATTCAGGCGTTTCTACAAGTGTTTCATTTGATAT
TGTGTGTTGTCATTTTCGCACTCATTGTTGGAGCGATTTGTGGCAATGGA
TGGCTTTATAACATGACCGAGAAAACATTGTATCAGGATACTGAAAAATT
CATTGGATTATGGCAAACATGTACAAATGTGTATGATTATGGATGTCCAA
CTGAGAGTTGTGTCAACTCTGGTAGTGATGCTGAAGATTACATTCAAGCA
ACACGAGCATTTCTGATTCTGGCAACTCTACCATCAATTTTTGCTTTTAT
TGGTGGAATTGGTATGTTATGTTCAGATCGTGTCAAAGGTCAAGTATCCG
CTATTTGCCACATCATCACAGGTGTATTTTTACTTATCGGGATGGCAGTG
TATACAGCTAAGGTGAATGAAGAAGATTCATTCGATCTTTATAAATACAG
TTGGTCATTTGTTTTCGGTTGGGTAGCATTCGTGTTGACCCTCATTGCTG
CTGTAATCACTTTCACATTTGGTGCTCCAAAATTACCGAGAATCATTATC
GAGTTCAGAGAATAAATGTCTGGATTTAAAAAGCTTAATTCTAAAGAGag
AGAGGTACTTATCAAGCAAATTCAGGCGTTTCTACAAGTGTTTCATTTGA
TATTGTGTGTTGTCATTTTCGCACTCATTGTTGGAGCGATTTGTGGCAAT
GGATGGCTTTATAACATGACCGAGAAAACATTGTATCAGGATACTGAAAA
ATTCATTGGATTATGGCAAACATGTACAAATGTGTATGATTATGGATGTC
CAACTGAGAGTTGTGTCAACTCTGGTAGTGATGCTGAAGATTACATTCAA
GCAACACGAGCATTTCTGATTCTGGCAACTCTACCATCAATTTTTGCTTT
TATTGGTGGAATTGGTATGTTATGTTCAGATCGTGTCAAAGGTCAAGTAT
CCGCTATTTGCCACATCATCACAGGTGTATTTTTACTTATCGGGATGGCA
GTGTATACAGCTAAGGTGAATGAAGAAGATTCATTCGATCTTTATAAATA
CAGTTGGTCATTTGTTTTCGGTTGGGTAGCATTCGTGTTGACCCTCATTG
CTGCTGTAATCACTTTCACATTTGGTGCTCCAAAATTACCGAGAATCATT
ATCGAGTTCAGAGAATAAATGTCTGGATTTAAAAAGCTTAATTCTAAAGA
GagAGAGGTACTTATCAAGCAAATTCAGGCGTTTCTACAAGTGTTTCATT
TGATATTGTGTGTTGTCATTTTCGCACTCATTGTTGGAGCGATTTGTGGC
AATGGATGGCTTTATAACATGACCGAGAAAACATTGTATCAGGATACTGA
AAAATTCATTGGATTATGGCAAACATGTACAAATGTGTATGATTATGGAT
GTCCAACTGAGAGTTGTGTCAACTCTGGTAGTGATGCTGAAGATTACATT
CAAGCAACACGAGCATTTCTGATTCTGGCAACTCTACCATCAATTTTTGC
TTTTATTGGTGGAATTGGTATGTTATGTTCAGATCGTGTCAAAGGTCAAG
TATCCGCTATTTGCCACATCATCACAGGTGTATTTTTACTTATCGGGATG
GCAGTGTATACAGCTAAGGTGAATGAAGAAGATTCATTCGATCTTTATAA
ATACAGTTGGTCATTTGTTTTCGGTTGGGTAGCATTCGTGTTGACCCTCA
TTGCTGCTGTAATCACTTTCACATTTGGTGCTCCAAAATTACCGAGAATC
ATTATCGAGTTCAGAGAATAAATGTCTGGATTTAAAAAGCTTAATTCTAA
AGAGagAGAGGTACTTATCAAGCAAATTCAGGCGTTTCTACAAGTGTTTC
ATTTGATATTGTGTGTTGTCATTTTCGCACTCATTGTTGGAGCGATTTGT
GGCAATGGATGGCTTTATAACATGACCGAGAAAACATTGTATCAGGATAC
TGAAAAATTCATTGGATTATGGCAAACATGTACAAATGTGTATGATTATG
GATGTCCAACTGAGAGTTGTGTCAACTCTGGTAGTGATGCTGAAGATTAC
ATTCAAGCAACACGAGCATTTCTGATTCTGGCAACTCTACCATCAATTTT
TGCTTTTATTGGTGGAATTGGTATGTTATGTTCAGATCGTGTCAAAGGTC
AAGTATCCGCTATTTGCCACATCATCACAGGTGTATTTTTACTTATCGGG
ATGGCAGTGTATACAGCTAAGGTGAATGAAGAAGATTCATTCGATCTTTA
TAAATACAGTTGGTCATTTGTTTTCGGTTGGGTAGCATTCGTGTTGACCC
TCATTGCTGCTGTAATCACTTTCACATTTGGTGCTCCAAAATTACCGAGA
ATCATTATCGAGTTCAGAGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037628XLOC_037628Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059825-exon-scaffold_331-1491911889:676299..676371TCONS_00059825-exon-scaffold_331-1491911889:676299..676371Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1510915933:676299..676371TCONS_00059825-exon-scaffold_331-1510915933:676299..676371Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1575043694:676299..676371TCONS_00059825-exon-scaffold_331-1575043694:676299..676371Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1491911889:678338..678463TCONS_00059825-exon-scaffold_331-1491911889:678338..678463Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1510915933:678338..678463TCONS_00059825-exon-scaffold_331-1510915933:678338..678463Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1575043694:678338..678463TCONS_00059825-exon-scaffold_331-1575043694:678338..678463Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1491911889:679308..679354TCONS_00059825-exon-scaffold_331-1491911889:679308..679354Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1510915933:679308..679354TCONS_00059825-exon-scaffold_331-1510915933:679308..679354Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1575043694:679308..679354TCONS_00059825-exon-scaffold_331-1575043694:679308..679354Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1491911889:680568..680635TCONS_00059825-exon-scaffold_331-1491911889:680568..680635Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1510915933:680568..680635TCONS_00059825-exon-scaffold_331-1510915933:680568..680635Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1575043694:680568..680635TCONS_00059825-exon-scaffold_331-1575043694:680568..680635Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1491911889:681651..681785TCONS_00059825-exon-scaffold_331-1491911889:681651..681785Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1510915933:681651..681785TCONS_00059825-exon-scaffold_331-1510915933:681651..681785Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1575043694:681651..681785TCONS_00059825-exon-scaffold_331-1575043694:681651..681785Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1491911889:682516..682537TCONS_00059825-exon-scaffold_331-1491911889:682516..682537Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1510915933:682516..682537TCONS_00059825-exon-scaffold_331-1510915933:682516..682537Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1575043694:682516..682537TCONS_00059825-exon-scaffold_331-1575043694:682516..682537Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1491911889:684406..684424TCONS_00059825-exon-scaffold_331-1491911889:684406..684424Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1510915933:684406..684424TCONS_00059825-exon-scaffold_331-1510915933:684406..684424Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1575043694:684406..684424TCONS_00059825-exon-scaffold_331-1575043694:684406..684424Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1491911889:684479..685200TCONS_00059825-exon-scaffold_331-1491911889:684479..685200Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1510915933:684479..685200TCONS_00059825-exon-scaffold_331-1510915933:684479..685200Clytia hemisphaericaexon
TCONS_00059825-exon-scaffold_331-1575043694:684479..685200TCONS_00059825-exon-scaffold_331-1575043694:684479..685200Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059825-proteinTCONS_00059825-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:676299..685200 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.590662	0	0	0	5.02686	4.45308	0.319841	0	0	0	12.7199	16.0297	0	0	0	3.21027e-06	0	0	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004031PMP22/EMP/MP20/Claudin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059825 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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