TCONS_00062546 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062546
Unique NameTCONS_00062546
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6877

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062546 ID=TCONS_00062546|Name=TCONS_00062546|organism=Clytia hemisphaerica|type=transcript|length=6877bp
ACAACAGTACCTTTTGAATAGATATGGAGAAATCGTGTTCATCCTTGAAA
TCAAACCAAAGCAATGTGGATTTAGAGCCATTGCTGTTTCTTTGTTTATA
ATTTGTGTACGAACCAACGTCGACTATCAAGTTGTTGGTACGATACTTTG
CAATAAATACAACGACCATGCCAAAGTTTTGACAGAAGCATTGACTGAGT
TCAAAGAGATAAATAGTTCTTGGAAACCCAAATATCTAATAATTCACCCA
TCTGAAACAATGATAACAGTTGTTCACCATCTATTTGCAGGTGTGGAATA
TTACTTCAACAAAGACTCCTGTCTACAGGAATGGGAAGAATACTTGACAA
ACCAAAAGAACGGCCTCAAAGAACATTCTACAAAACTTCTACGGGATTTG
GAGACTTTACAATCCTCATCATCAATGGATGAATTCAAACAGAATGCCAA
TCAATTGTCCAGATGTCCAATATGGAAGTCTGAAAGCACTTCAACATTTC
GCCAAAACTGGTTTGCTGGTTCAAAGagaTGGGTTGCATGTCGTTTGCCA
AGAAACTTACTGGTCCTTCTCAAAGACGAATGGTTGAAATCTATCATTGG
ATGTTACGAGGGTGCTGTCATTTTATCTACTTCTAGAAGTTCCAAGGAGG
GAGGAATAGTTCATTTGATCGAAAGATTAACAGCGACCTTAGTTAAAGAT
AGATTCGAAAGctACATATTGAAAAACAAGACTTACCTAACGAACAACGT
TCTCATGGCGAAACAAAACCTTTCACTGATGACTGATTTGGGTATCCCTC
TTAACATGACGTCACACTGTGCACACATAATAAACCCCATGAATGAAATT
CAACCACAGATCAAGAAGATCAAACAAATCAATCACAACCAGTTCGAAGT
TACCACTCGAAAGACACACACCAATACTACACATATTGTCACAGTGGCTG
GTAATCAAGCTGCGTTCCCATCATGCTCTTGTGCAGAATGGAAAAACAAT
GCAATTCTCTGCCAACATATGTTTATGGTTATACAATCATTCAAGTTTCA
ATTTGATTGGCTGAGCCCGCTGTACCGAGAAagcccatttttcaaaatcg
acCAAATCAGCATTAATTCAGATCTCGCTGAAAGCACTTCGAAGGAAGAT
GATAGAGAGATGATATCCGAACCTGTTCAAGGGCCAACAACACTCGTGTC
CACTGTATTGGCTCCAGCAAATAATGTTAAATCATCTTCTGGTCATTCCT
CAAAAACCAAATCTGGAGGAGAAAAATCTGGCTTCCAAATTAAGATTGCT
GTACAGTCAAGTGTGGATAGAGTCACTGCCAGGACGATTAATTTGGCTTC
GTTGAAAGACGGGAATGCAACTCCTGTCGTAGATGAAATAAATTGTCTTG
AAAAAGCACACACTGTCTTAGTGAACAAAGATGAGCCCTCCAATCTTAAC
GAAAAAACTGATCTTGAAAAAGAAGATTCGGGTTTTGACGATACCATACC
AACAATACCAATGATGATCGAACCACAGCGATCGAGAAGCAGACAAGACG
TGCTAGAGCAATCTAAAGGTGTCAGCATAGGTGCAGATTCAGTCAAAACC
AATAGTCAACACGTTGCCAACATCAAGGAAAATCTACTAAAAGATTCGCT
GAACACAATTAACTTTGCTCCTAGTAATGTCAACGAAAATTCTCGACTAC
ACAAAGACTTGGCAAAAGCTGATTCTAAAACAAAGGGTGCTCAAATCATT
GAAGAACTTACACCAGCAGTTACCAAAGGTACTTTCACCTTACCGCCAAG
AAGatctattttcaaaaagaatctACAAATGAACTCctgtgatattattg
ttttcaaaCGCTTCATCGTTTGTATGGAAGAATTGTGTTATTTCGATGAA
AACTTTATCGCTCAAGTGAAAGAGGAATTTCAACGTGAAATTCAACGAAC
AGACTCAGAAAATATCATTTTGCAGTCCCAGAATGATTACAATACTGTCG
AAGGGTCCCTGGCAACCGAGTTTCGAAACACTGATGTAACTATGGCAACA
GACAATAACGAACTAATGCCGATCATCATTGATTGTAAATCCTTGGCCAA
TCAGAATGGATTGAATAACGTGATCTTAGCAGATGATATAACTTTAAATT
TCACAGGAACAGAAACCAGCTCATTGAACAACGCTAAAAAGGAAGACCCT
CGATCGGTGTTGGGAAATTTTGCGAAGCTCAGTCAGTCTGTTTTTCCTGA
TTCAAGCAGGCAACAATCAGATAGGACCAACCGCAAGCAGAACTCGATTC
AATTCCGCTCTAACAATAAATCTGATCAACCATTATCACTGctctatcaa
aatcaaaacctgACAATCAATTTCCCTCCTAATACACGACTAAGCAAGAA
TAACTTTTCAACTAATGAGGCGCTCACGAAGCCGATAGATTCGCTCGAAT
CTTTACACAAGCAATCTATCAAGTCAGCCAGTACTGCAAATTTACTTTCA
AAGAACGAAACTTCTCAATTGTGTGATAACCTTACTCGAGCATCTGTTGT
GGCATCGAAAACTGTAACAAATGTCGAAAAGACTTCAGCAACAACGCACA
CCATGAAATCACCGACCATTGAGTCCAACGATAATGAATCCTGTCGTATC
GTCATCCCTACAAAGAAGCGGTCATTCAAATTCCGGAAActcaacaaaca
acaaaagaCAACAAGTCCTTTCGCATCCAAAGAACACCAAGGAAATCCTC
AAGACGAAACCAAGCAGGGAAATATGTCACCAATATCGACATCCGACGCT
TCCTATACCAATAAGAGAAAATATACATCTGAACAAGTGCTCAATACATC
TAGCGTTAGAAAAAAGAGTCGTGTTGATGCGTTACCGATACCAGACAATC
TACCTACTGAACCAGATAATGGAGATCAAGTTGAAGTTATAAAGAAGCAG
AACTATTGTCGTTATTGTCCAGAGTCTGTCAGAATCACATCTTCTACGTC
TACACTGAAACAAAACCACCACACAGCCGTTACCGTATCTTCATCAAACA
AAGTGTCAAGTAAATATTCCATCAAATCATCTTCAGTGCTTGCCTCAACA
CTCTCAACCAGATCAGTTGAAAAGGATATTGCTATTTCGTCCAAATCTGC
CATCGTCAACCATACCAAGGCTATTTTAACGAAACCATTGTCTACATCAC
CGATGTTTGTTTCCGCCAGTAACAACATTCCTATTCTACCGAAGCAAACA
GTCAAAGAGTTTTCAACGAAATCTGTTTTTGCCAATGGTAACACTCCTCC
TATCTTGCCAAAGTCTCTATCCGCCAGTACTACCAAAGAAAAATCTAAAG
CGTCGAACACTGTTACACCCAAGCGTGTAGTCGCTAGTAAAACCAAAGAG
AACTATTCACCATTATCATCTATTGTTGTCAATAGCAACAAATATACCTT
ATCAAAGCCTGTCATCACCAGTAAAAGTAAAGATGGTTCTATTGCGTCCA
AATTCTTAACCACCAAAAGAAACACGTCTTTCTCACCGGAAGCTCTTTCC
AAAGGAATCATTACTGATGCCAACAAAGAACCATCTGTCGTATTACAAAA
TGCTTCAAATACACCTACAGTCTACATGTCGAAACAAACAATTGATGAAT
TGAAGACTTGGCAATCGAATACATCAGCAGCTCCATATATGCAAGGACAA
CTTCTTCCTTTAATCAGCCTTGGCTCGACCAAAGTCTCTCTCCAAAATGA
TGTTCGAGGCCAGCAATCGATATCAGTCACTCAACATCAGTTACCTTTTC
CGAAGAAAACTTTATTTCCACAGCCGACCGCAGTTACCGCAGCTTCATCA
ATCAGCCCGAAGCAAGCTGTTTTAATGAAACCAAAAGCAAAGAGAACAAA
CACCTCTACACTGCCTCAGCCTCAGTCgtcagaaattcaaaaaagacgga
ACTGGAATGAGCTATCTTCTCCCATTACCATAGACTCAAAGAAGCCGTCA
TCAAACCAGTCGCCGACCAAATCCAAAGAAAAGAAATGTTCCAAACAGCA
TCAATCACATTCAAAAATGCCTGCAACAAGTCGAAATAAAAACGCAGCTC
AAAAGATGGGTNGCATCAATCACATTCAAAAATGCCTGCAACAAGTCGAA
ATAAAAACGAAGCTCAAAAGATGGGCGGCCCAAATTCAAGCTCTCAAATC
AACCAGAACCTAAAGACACCAATTATACAATCAACACCAGATCTGAACCA
ACCAAACATGACGCTGAAGACGAATCATGTAATGTTTCAGGACCCGAAGA
GACCAAATACAATCCAATGGCTGGGAAACCAGAACCGAAAATTACCATTA
CCTATTCTACCAACAGATTATCTCCAATATTACAAACTAGCCAATCAAAC
GGCTTTACAAACTTTGTTGGAACTTAAGAGGAAATCTTTAGCTGAGATTA
ATGCTAATGTTCAAAATCCGTACGCACTGAAGAAACCGCTATCAAACCTT
CAACCGTCAAATAAACAAGTGAAAAGTTCTAGTAAAATCGATAAACGACC
CGTCATATCACCACTCGTACAAAATTTTTTAGACAATCGGTCAGCCTCGT
TCCGAGAATTAGCAGCTCGGATATACGACGAAGATATGTCAAATATCCAA
ATCTCTCAAGTGAAATCGCTAGAACGATCTTCGACAGTAAAACGGAAAGG
GAATGAAAACATAACGAGTGATTCGATTCAAACAAGTGTTATCGTAAATC
CACCCGAAAGAAATATCAGATCGAATCAAGGTGTTATTGAAGGTTCGACA
ACTGATACTTCAGACGAAATCAATGCAGATTGCGAGAAAAGTGCATCTAG
GAACATTCAATTAAAACAACTAGATTCCCTCGAAAAATCGACAGCAAAAC
TGCAAATATCAATTAATGAATCGATGGAAACGAGTAAGAGCTCGATGAAA
AATCCTTCGGCCAACACACCACAAGAAACCGATCCTTCAAGCAAAAACAC
CTCCCCGTTCGATTCATTGAATAATTCACTGATTGAAAATACTTTTGAAG
AATCGAAtcgaaaaatcaaagaaaaattgttaCAACTGGAAATTAACGAT
ATAAAAGAACGCATCGACTCCATCAAAAGGAAGAATCTCCAGAAAACTAT
TGAGCCAAAACTGACCGAGAAAAACTCCATTGAAACTCACCATCACCCAA
CGTCTTCAAAAGGGAAAGAAAATGTCAATCCTAGCATACATAAAAAGCCC
ACGATAAAGGCCATTAAACATAAAAAGAAGAAATGGCTAGATGTAGATGC
GTTTGGAAAACTACGAAAACGAAGAAAACCAAAGCCAAAAGAACCGtcca
aagaaaatgaaaatgctatTGATAGTTTAGAATGTAAACCAGATATGTCT
GTTCTTTCACGCGCAATCTCCGCATCGATTACCATTCCATCAAAAGACAA
ACAAATTTTGACTGAAGAATCGAATTTTCAGAGTCAAGCTTCCAATGATT
CTCGTAAAGACTCGCTCTCGAGATTTTTACCGAAAAACGATGAACAATTC
CCATCTTCGACAAGAAAACTTACCGACCAACTTCTCAGCCAGCCAAAACA
AAAGCGGAAGTCGGCAACGAACATCTTTGACTTACTTAACGAGGTGAACA
GAGATGAAGTCATCCAAACTACACAAAAACGTCACCGGTATAACGATCCA
ATTAAACTGTTGAAACTCCAAAGCGATGAACAACCTGAGAAACAGAATGA
CACGCCAAACCCATGTCCAGTTTTCGTACAACCTCAATCATTGTCTGATT
CAATCCCGATCCAGTCTATCTATGAAGGATTGATTCCAGAAGCCGAGATT
AAGACGGAGCCTATAGACCATGATCATACGCATGAAAGAAATCTAGAACA
AGCCAACTTCATGAAAACTTTGGATACATacctgaaaaacatgaaaactt
CAGACtcctttttggagcaaaatttGGAAGAAGTAAAAAGTGGAAGTCCA
GATGTCCAAAATCAATCAGAAACGTTTCAATTCGGAGCGAATATAGACAA
CCAAGACTTCCTTGAATCTGAGACCAACGAGACATGGAGTACTTCTAGTG
AAACGAGTTTGACAATTGATGAACAAAATCGCTCACCTTCTTCcttttat
tcttttaatacCGAATCAAAAAGCGATAATGGAGAAGCACCCGATTTCCC
ATATCTCACTAATATTAAACTCCACGATAAGGATACCGAAGACGCACCGA
CTTTTTCTTATNCTAATATTAAACTCTACGATAAGGATACCGAAGACGCA
CCGACTTTTTCTTATCTCCCTAATAATGAACCGGATGAGACGTCGAACAG
TGCCGCCAGTGACACAACTTTGAGTATCGAGGGGCGGCATATGATGACGG
GATTCGATCGAGATTTTGATATTAAAGATGAGCCAATCGATGTGGTTGCC
CTATGATATTTATGTTGGATTGGTAATTTAATGCATGATGATTGAGTATT
TTATGTATTGGTGAAATCTGGTCAAAATGCGAAATTTAgccaaaaaattt
ctttccaaattatagatatttaaaggaaattttgaaattgttccttgatt
tttttcagtggtACAGTATTATGTCAACTGTGCAAATTTCATTCACCAAA
AAATGATGTTCGAACTTTTCTACCAGAAGATGTTggctaaattttcaatt
ttcctcATCATCccttttgatgtatttttattagtgaatttcaaattttt
atagtAAATTATCCTCTCCGATTACGTAAGGGTtgtattttcatcttcat
caaaagtagaaaattcttttcaaacTGAAGTATAGCCATGAATATATCTT
TCtgctgaaaattgaaaatattttgag
Run BLAST on NCBI

transcript from alignment at scaffold_369:33517..42470+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062546 ID=TCONS_00062546|Name=TCONS_00062546|organism=Clytia hemisphaerica|type=transcript|length=8954bp|location=Sequence derived from alignment at scaffold_369:33517..42470+ (Clytia hemisphaerica)
ACAACAGTACCTTTTGAATAGATATGGAGAAATCGTGTTCATCCTTGAAA
TCAAACCAAAGCAATGTGGATTTAGAGCCATTGCTGTTTCTTTGTTTATA
ATTTGTGTACGAACCAACGTCGACTATCAAGTTGTTGGTACGATACTTTG
CAATAAATACAACGACCATGCCAAAGTTTTGACAGAAGCATTGACTGAGT
TCAAAGAGATAAATAGTTCTTGGAAACCCAAATATCTAATAATTCACCCA
TCTGAAACAATGATAACAGTTGTTCACCATCTATTTGCAGGTAACCTTGT
ATACTTCTATATTATAAGGCCCAAAGAGCGGTGACCTTTGACCGGTTTCT
TGCTCTACAAACTTGATCCTTGATGTTCTTTACATGTCAGCAGGTCATCT
CCCTCCCTCGCTTTCTTTCCTTGCTATATTTTTAGAAGTAGTGGCCAGCT
TAATATAAGGACGTTGATAATGAGAAATCGACTCGTTTCTTCAAGTCTCA
CTTTTCCGGGGAGTTTTAAAATAACCTTATGAATCTATCTGTAATATATA
CTGTAATTCCTTTGAAATGGTGATCTATTGTTTCCCATTGTTTACACCCT
TTATTAATAGGTGTGGAATATTACTTCAACAAAGACTCCTGTCTACAGGA
ATGGGAAGAATACTTGACAAACCAAAAGAACGGCCTCAAAGAACATTCTA
CAAAACTTCTACGGGATTTGGAGACTTTACAATCCTCATCATCAATGGAT
GAATTCAAACAGAATGCCAATCAATTGTCCAGATGTCCAATATGGAAGTC
TGAAAGCACTTCAACATTTCGCCAAAACTGGTTTGCTGGTTCAAAGGTAA
CATGACTGTATAATCACGAAACAAAGTACAAGTTGTCGAATCAAAAATGT
TTAATAATACTTTAATGCGCTTTTATCCATTGTTCTGTTCCCCTTAATAA
GTCCCCCCCCCACCTCGACTATGCATTATACTGCTTGATATAATTGAAAA
ACTGTTAACCGTCTGACCATTAATGATGCTACAATCCCCCAACAAATATC
TTGAGACAGAAGAACTCTAAATAGTTTTGCAAGATAAAAATCCGTCCCCC
GGACCCCACTGTCAGTGTTGAGTCCGGAAATGGCCGAGAACTCAACGCTG
ACAGTGGGGGGAAAGGGGGACCATGTGAAGTGTCTCAGATATAAATTGGG
GGATTGTAGAAtaatatgaaaattattttctcatAATTTCGCGACTGTAG
TGCAAAAGGTAGAGCTTTTGTTTAGGTATGTTTACGGTTCAAAAATGTTA
CTTGATACATCTCTGCTTAATGCTCGGAAattaaagagaaggatcaaggg
taagttgCGCGATCCAGGGGAAAGAATGGCGCCCTACCCTACCTTTGGGT
TGACAGCTAACTTACTTATATATCAGAATtcacatatcatgaattatcat
ttttcttttcaagagaTGGGTTGCATGTCGTTTGCCAAGAAACTTACTGG
TCCTTCTCAAAGACGAATGGTTGAAATCTATCATTGGATGTTACGAGGGT
GCTGTCATTTTATCTACTTCTAGAAGTTCCAAGGAGGGAGGAATAGTTCA
TTTGATCGAAAGATTAACAGCGACCTTAGTTAAAGATAGATTCGAAAGGT
ATTGTCAGTCCTTTAAAAGTATTACAAGCACTTTATAATTCCACCCTTAT
AATAGTCAAGCAAGCTTTTCAGCCAATGTAAGATTCTATACTTTGTTGAT
TTTCATGTTCGTAGAATTTGAAGTGTATATCATTTTGCATTACGTAATTT
GCTCGAGATTGACAGATAATAACTAGAATATTTTTAATTGATATTTAAAA
GTGTTTCTTTAGAATTGATTCAAGAACAATATTCTGTCGAAATGCTAAAG
ATTAGTACTTCTAATAAGTTTAGAATGTAGATTGTACAGGGCTGTCTTTT
AGATAATattagacggttcccgtcgtcgcaaacgccggttaacggttttg
cttgcacgtcaaaagcctttaaaatactataatgtcggttaattcctgac
attgtttcggcttaaaatgccgaatacaataataaaaattatacttctaa
actttctacattagtcaaaattttgtttccGTAAGCCTCGAcgatatgtc
tttttaagataacggaagttatgaaatgccatagtgaccctgtcaaaatt
atcgagggtacccgtcgttgcagacccccaaaggtgtctgaggtggtgag
agggttgcttctaggaaagaaaaagccttagttgtgaaggagaggctcgc
gctttgcaattgagcactgaaggtttacccgtttgttggcttcacatgcg
gacagcttaagaccggcgcatatgcaatgcaaccaacattgaaacctttt
taaataatgttagacgaagtttaatcatcgaacaacaatgttggattttg
ttgcgtgtgttgatataagattattcgaaatcgtgcaacaaaaatgccac
acctttttatttgaaactttgtgacgtcgcagtactttttcatgaaattg
acgtcagaacttatttcgtttacaaatagcagtgtagagtcttctctaat
ctgagttttctacgcttgtcaaacttagcgcgagactttttgtatcgaag
gtggataggttttccagccgcggcgttcaaattttagaaaccttaacata
tgttactgggctagcgttacagacatttttcataaactcatttagtatag
taagatattCTTTTAActttcttgtctttttcttttagctACATATTGAA
AAACAAGACTTACCTAACGAACAACGTTCTCATGGCGAAACAAAACCTTT
CACTGATGACTGATTTGGGTATCCCTCTTAACATGACGTCACACTGTGCA
CACATAATAAACCCCATGAATGAAATTCAACCACAGATCAAGAAGATCAA
ACAAATCAATCACAACCAGTTCGAAGTTACCACTCGAAAGACACACACCA
ATACTACACATATTGTCACAGTGGCTGGTAATCAAGCTGCGTTCCCATCA
TGCTCTTGTGCAGAATGGAAAAACAATGCAATTCTCTGCCAACATATGTT
TATGGTTATACAATCATTCAAGTTTCAATTTGATTGGCTGAGCCCGCTGT
ACCGAGAAagcccatttttcaaaatcgacCAAATCAGCATTAATTCAGAT
CTCGCTGAAAGCACTTCGAAGGAAGATGATAGAGAGATGATATCCGAACC
TGTTCAAGGGCCAACAACACTCGTGTCCACTGTATTGGCTCCAGCAAATA
ATGTTAAATCATCTTCTGGTCATTCCTCAAAAACCAAATCTGGAGGAGAA
AAATCTGGCTTCCAAATTAAGATTGCTGTACAGTCAAGTGTGGATAGAGT
CACTGCCAGGACGATTAATTTGGCTTCGTTGAAAGACGGGAATGCAACTC
CTGTCGTAGATGAAATAAATTGTCTTGAAAAAGCACACACTGTCTTAGTG
AACAAAGATGAGCCCTCCAATCTTAACGAAAAAACTGATCTTGAAAAAGA
AGATTCGGGTTTTGACGATACCATACCAACAATACCAATGATGATCGAAC
CACAGCGATCGAGAAGCAGACAAGACGTGCTAGAGCAATCTAAAGGTGTC
AGCATAGGTGCAGATTCAGTCAAAACCAATAGTCAACACGTTGCCAACAT
CAAGGAAAATCTACTAAAAGATTCGCTGAACACAATTAACTTTGCTCCTA
GTAATGTCAACGAAAATTCTCGACTACACAAAGACTTGGCAAAAGCTGAT
TCTAAAACAAAGGGTGCTCAAATCATTGAAGAACTTACACCAGCAGTTAC
CAAAGGTACTTTCACCTTACCGCCAAGAAGatctattttcaaaaagaatc
tACAAATGAACTCctgtgatattattgttttcaaaCGCTTCATCGTTTGT
ATGGAAGAATTGTGTTATTTCGATGAAAACTTTATCGCTCAAGTGAAAGA
GGAATTTCAACGTGAAATTCAACGAACAGACTCAGAAAATATCATTTTGC
AGTCCCAGAATGATTACAATACTGTCGAAGGGTCCCTGGCAACCGAGTTT
CGAAACACTGATGTAACTATGGCAACAGACAATAACGAACTAATGCCGAT
CATCATTGATTGTAAATCCTTGGCCAATCAGAATGGATTGAATAACGTGA
TCTTAGCAGATGATATAACTTTAAATTTCACAGGAACAGAAACCAGCTCA
TTGAACAACGCTAAAAAGGAAGACCCTCGATCGGTGTTGGGAAATTTTGC
GAAGCTCAGTCAGTCTGTTTTTCCTGATTCAAGCAGGCAACAATCAGATA
GGACCAACCGCAAGCAGAACTCGATTCAATTCCGCTCTAACAATAAATCT
GATCAACCATTATCACTGctctatcaaaatcaaaacctgACAATCAATTT
CCCTCCTAATACACGACTAAGCAAGAATAACTTTTCAACTAATGAGGCGC
TCACGAAGCCGATAGATTCGCTCGAATCTTTACACAAGCAATCTATCAAG
TCAGCCAGTACTGCAAATTTACTTTCAAAGAACGAAACTTCTCAATTGTG
TGATAACCTTACTCGAGCATCTGTTGTGGCATCGAAAACTGTAACAAATG
TCGAAAAGACTTCAGCAACAACGCACACCATGAAATCACCGACCATTGAG
TCCAACGATAATGAATCCTGTCGTATCGTCATCCCTACAAAGAAGCGGTC
ATTCAAATTCCGGAAActcaacaaacaacaaaagaCAACAAGTCCTTTCG
CATCCAAAGAACACCAAGGAAATCCTCAAGACGAAACCAAGCAGGGAAAT
ATGTCACCAATATCGACATCCGACGCTTCCTATACCAATAAGAGAAAATA
TACATCTGAACAAGTGCTCAATACATCTAGCGTTAGAAAAAAGAGTCGTG
TTGATGCGTTACCGATACCAGACAATCTACCTACTGAACCAGATAATGGA
GATCAAGTTGAAGTTATAAAGAAGCAGAACTATTGTCGTTATTGTCCAGA
GTCTGTCAGAATCACATCTTCTACGTCTACACTGAAACAAAACCACCACA
CAGCCGTTACCGTATCTTCATCAAACAAAGTGTCAAGTAAATATTCCATC
AAATCATCTTCAGTGCTTGCCTCAACACTCTCAACCAGATCAGTTGAAAA
GGATATTGCTATTTCGTCCAAATCTGCCATCGTCAACCATACCAAGGCTA
TTTTAACGAAACCATTGTCTACATCACCGATGTTTGTTTCCGCCAGTAAC
AACATTCCTATTCTACCGAAGCAAACAGTCAAAGAGTTTTCAACGAAATC
TGTTTTTGCCAATGGTAACACTCCTCCTATCTTGCCAAAGTCTCTATCCG
CCAGTACTACCAAAGAAAAATCTAAAGCGTCGAACACTGTTACACCCAAG
CGTGTAGTCGCTAGTAAAACCAAAGAGAACTATTCACCATTATCATCTAT
TGTTGTCAATAGCAACAAATATACCTTATCAAAGCCTGTCATCACCAGTA
AAAGTAAAGATGGTTCTATTGCGTCCAAATTCTTAACCACCAAAAGAAAC
ACGTCTTTCTCACCGGAAGCTCTTTCCAAAGGAATCATTACTGATGCCAA
CAAAGAACCATCTGTCGTATTACAAAATGCTTCAAATACACCTACAGTCT
ACATGTCGAAACAAACAATTGATGAATTGAAGACTTGGCAATCGAATACA
TCAGCAGCTCCATATATGCAAGGACAACTTCTTCCTTTAATCAGCCTTGG
CTCGACCAAAGTCTCTCTCCAAAATGATGTTCGAGGCCAGCAATCGATAT
CAGTCACTCAACATCAGTTACCTTTTCCGAAGAAAACTTTATTTCCACAG
CCGACCGCAGTTACCGCAGCTTCATCAATCAGCCCGAAGCAAGCTGTTTT
AATGAAACCAAAAGCAAAGAGAACAAACACCTCTACACTGCCTCAGCCTC
AGTCgtcagaaattcaaaaaagacggaACTGGAATGAGCTATCTTCTCCC
ATTACCATAGACTCAAAGAAGCCGTCATCAAACCAGTCGCCGACCAAATC
CAAAGAAAAGAAATGTTCCAAACAGCATCAATCACATTCAAAAATGCCTG
CAACAAGTCGAAATAAAAACGCAGCTCAAAAGATGGGTNGCATCAATCAC
ATTCAAAAATGCCTGCAACAAGTCGAAATAAAAACGAAGCTCAAAAGATG
GGCGGCCCAAATTCAAGCTCTCAAATCAACCAGAACCTAAAGACACCAAT
TATACAATCAACACCAGATCTGAACCAACCAAACATGACGCTGAAGACGA
ATCATGTAATGTTTCAGGACCCGAAGAGACCAAATACAATCCAATGGCTG
GGAAACCAGAACCGAAAATTACCATTACCTATTCTACCAACAGATTATCT
CCAATATTACAAACTAGCCAATCAAACGGCTTTACAAACTTTGTTGGAAC
TTAAGAGGAAATCTTTAGCTGAGATTAATGCTAATGTTCAAAATCCGTAC
GCACTGAAGAAACCGCTATCAAACCTTCAACCGTCAAATAAACAAGTGAA
AAGTTCTAGTAAAATCGATAAACGACCCGTCATATCACCACTCGTACAAA
ATTTTTTAGACAATCGGTCAGCCTCGTTCCGAGAATTAGCAGCTCGGATA
TACGACGAAGATATGTCAAATATCCAAATCTCTCAAGTGAAATCGCTAGA
ACGATCTTCGACAGTAAAACGGAAAGGGAATGAAAACATAACGAGTGATT
CGATTCAAACAAGTGTTATCGTAAATCCACCCGAAAGAAATATCAGATCG
AATCAAGGTGTTATTGAAGGTTCGACAACTGATACTTCAGACGAAATCAA
TGCAGATTGCGAGAAAAGTGCATCTAGGAACATTCAATTAAAACAACTAG
ATTCCCTCGAAAAATCGACAGCAAAACTGCAAATATCAATTAATGAATCG
ATGGAAACGAGTAAGAGCTCGATGAAAAATCCTTCGGCCAACACACCACA
AGAAACCGATCCTTCAAGCAAAAACACCTCCCCGTTCGATTCATTGAATA
ATTCACTGATTGAAAATACTTTTGAAGAATCGAAtcgaaaaatcaaagaa
aaattgttaCAACTGGAAATTAACGATATAAAAGAACGCATCGACTCCAT
CAAAAGGAAGAATCTCCAGAAAACTATTGAGCCAAAACTGACCGAGAAAA
ACTCCATTGAAACTCACCATCACCCAACGTCTTCAAAAGGGAAAGAAAAT
GTCAATCCTAGCATACATAAAAAGCCCACGATAAAGGCCATTAAACATAA
AAAGAAGAAATGGCTAGATGTAGATGCGTTTGGAAAACTACGAAAACGAA
GAAAACCAAAGCCAAAAGAACCGtccaaagaaaatgaaaatgctatTGAT
AGTTTAGAATGTAAACCAGATATGTCTGTTCTTTCACGCGCAATCTCCGC
ATCGATTACCATTCCATCAAAAGACAAACAAATTTTGACTGAAGAATCGA
ATTTTCAGAGTCAAGCTTCCAATGATTCTCGTAAAGACTCGCTCTCGAGA
TTTTTACCGAAAAACGATGAACAATTCCCATCTTCGACAAGAAAACTTAC
CGACCAACTTCTCAGCCAGCCAAAACAAAAGCGGAAGTCGGCAACGAACA
TCTTTGACTTACTTAACGAGGTGAACAGAGATGAAGTCATCCAAACTACA
CAAAAACGTCACCGGTATAACGATCCAATTAAACTGTTGAAACTCCAAAG
CGATGAACAACCTGAGAAACAGAATGACACGCCAAACCCATGTCCAGTTT
TCGTACAACCTCAATCATTGTCTGATTCAATCCCGATCCAGTCTATCTAT
GAAGGATTGATTCCAGAAGCCGAGATTAAGACGGAGCCTATAGACCATGA
TCATACGCATGAAAGAAATCTAGAACAAGCCAACTTCATGAAAACTTTGG
ATACATacctgaaaaacatgaaaacttCAGACtcctttttggagcaaaat
ttGGAAGAAGTAAAAAGTGGAAGTCCAGATGTCCAAAATCAATCAGAAAC
GTTTCAATTCGGAGCGAATATAGACAACCAAGACTTCCTTGAATCTGAGA
CCAACGAGACATGGAGTACTTCTAGTGAAACGAGTTTGACAATTGATGAA
CAAAATCGCTCACCTTCTTCcttttattcttttaatacCGAATCAAAAAG
CGATAATGGAGAAGCACCCGATTTCCCATATCTCACTAATATTAAACTCC
ACGATAAGGATACCGAAGACGCACCGACTTTTTCTTATNCTAATATTAAA
CTCTACGATAAGGATACCGAAGACGCACCGACTTTTTCTTATCTCCCTAA
TAATGAACCGGATGAGACGTCGAACAGTGCCGCCAGTGACACAACTTTGA
GTATCGAGGGGCGGCATATGATGACGGGATTCGATCGAGATTTTGATATT
AAAGATGAGCCAATCGATGTGGTTGCCCTATGATATTTATGTTGGATTGG
TAATTTAATGCATGATGATTGAGTATTTTATGTATTGGTGAAATCTGGTC
AAAATGCGAAATTTAgccaaaaaatttctttccaaattatagatatttaa
aggaaattttgaaattgttccttgatttttttcagtggtACAGTATTATG
TCAACTGTGCAAATTTCATTCACCAAAAAATGATGTTCGAACTTTTCTAC
CAGAAGATGTTggctaaattttcaattttcctcATCATCccttttgatgt
atttttattagtgaatttcaaatttttatagtAAATTATCCTCTCCGATT
ACGTAAGGGTtgtattttcatcttcatcaaaagtagaaaattcttttcaa
acTGAAGTATAGCCATGAATATATCTTTCtgctgaaaattgaaaatattt
tgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039186XLOC_039186Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062546-exon-scaffold_369-1491911889:33517..33806TCONS_00062546-exon-scaffold_369-1491911889:33517..33806Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1510915933:33517..33806TCONS_00062546-exon-scaffold_369-1510915933:33517..33806Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1575043694:33517..33806TCONS_00062546-exon-scaffold_369-1575043694:33517..33806Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1491911889:34127..34362TCONS_00062546-exon-scaffold_369-1491911889:34127..34362Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1510915933:34127..34362TCONS_00062546-exon-scaffold_369-1510915933:34127..34362Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1575043694:34127..34362TCONS_00062546-exon-scaffold_369-1575043694:34127..34362Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1491911889:34980..35164TCONS_00062546-exon-scaffold_369-1491911889:34980..35164Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1510915933:34980..35164TCONS_00062546-exon-scaffold_369-1510915933:34980..35164Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1575043694:34980..35164TCONS_00062546-exon-scaffold_369-1575043694:34980..35164Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1491911889:36305..42470TCONS_00062546-exon-scaffold_369-1491911889:36305..42470Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1510915933:36305..42470TCONS_00062546-exon-scaffold_369-1510915933:36305..42470Clytia hemisphaericaexon
TCONS_00062546-exon-scaffold_369-1575043694:36305..42470TCONS_00062546-exon-scaffold_369-1575043694:36305..42470Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_369supercontigscaffold_369:33517..42470 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.242212	0.183043	0	0	0.427266	0	0	0.639951	0.169256	0.252885	0.624577	0.535426	0.336515	0.529325	0.229969	0.182552	0.225161	0.212639	0.387188	0.342826	0.106899	0.0854542	0.160722	0.123079	2.69942	2.48263	0.196685	0.257679	0.152732	0.0528927
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062546 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top