TCONS_00059715 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059715
Unique NameTCONS_00059715
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2819

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059715 ID=TCONS_00059715|Name=TCONS_00059715|organism=Clytia hemisphaerica|type=transcript|length=2819bp
AGATGGTTCAAAGTCATTATAGAGTTATAGACGAGGAAGGAAGCTTGGTC
AAGTTTTCAAACCAGGACATTTGAGAAGAAGGAAAGCTCTAAATTTAAAT
GGTATTGTTgtgttttcgtttttttttcgaacTTAATCATTTTCTTGAAC
AATGGTTATCAACAGTAAAAGCAAAATCATAACAAAAGTCAACATTCGAA
AAgccaaacaacaaaaacaagcgGCAGATAAAATGATCGAGAAAAATCGA
CCGTTACTTATCAGGGCGTATTCCGCTGAATCAAGCGGTGGTTATTCTTA
CGGGAAACGTAATAATGTATACGGAACAGCTCATTTGGAGTCATCCcgta
aagaaaagaaagtgGTACAGTTTTGTATGAGATATTTGAGCATGGCGATA
TGGGGAATACCAACTATGCAAGATACTCAAGGACTTCAAGCGATTCCTGA
ACGGCCCGAAAGTGTCATCGAAGATCAGAACAACAACATCCTCAACAGCG
ACCATCTTCAGAAAGCCAACAAAAGGAAATTGCAAAAATCATATAATCCT
GTAACCAACATGGCGTCACAACCACAAGACCATGAGTGCACatattgttt
aaaaatcttcCAAAGTAAAGCCACACTGGATATCCATTTGATGACGAAAA
GACACGATTGGCAATTAAAGAAAGCTATCGAGAACATGGATTCCATAAAT
AATGAAGTGACAACTGAGGACGACTTCGCCAAACATTATTTGACGAGTGG
AAGGAATGAAACCCAACAAGAACATTCTCCAACTCTTTGTAAAGAAGGTC
GTTATTCAAACGGCTCACTCGTTTCAAGCGAAGAAGGATATTACAGTACG
GATAGCGATGAAACGAAACACATGAACACTTACTCTACGACCACCGCCAA
CGGGCCCTCGTGTCAACGGCGTGGCGGTGTCATAGCTAACGGGGCGGTTG
ATATGGCGTCATATAAGCAACGCCCATCTGTGATACGGCTAAAACGTATG
AAAATGGAGGAGCTTAAAGAGATATATAAACAGTATGCTGCTTCGAGAGG
CTCTGGGGATTTATATAAAAACTTACTAGACACTTATGTGGATTTCAATT
TCTATCCGGACGCTGAGAATCGTCAGTTTTCGGACAGTGAGGTAGTTAAC
GTTTCAGCAAAGTCGAATCGAAAATATAGCGTTTCGGAGAAAGAGGCGCT
GATGCGAAGAGATTTGGTTTTGACGGAGATGGCGGATACGGAGAAGAATT
ACGTAGACGACCTCGCGTTCATTATTAACGAGTACTTCCCCTTGATGGAT
AAAGATGAAGTGTCAGAAGACTTGAATGGCGATTTCGAAAAGATATTCGG
AAATATCcaagaaatttataaatttcacTCAAGGATATTTTCTGAGAAGA
TCGAAGATTGTTTAGAAGATCCACAATTACTGAACGAAACATTTTGTCAA
TACGAGGACGAGCTAGCCACATTATATTCACAATACTGCAAATGCAAACC
ATATGCTGACGAAGCATTACATAATCATCAAGACGAAATCGACATGCTAC
GTCGAAAATATTTACCAAAAGTGAAATTCTTGTTGAAAGATTATTTGGTG
ACACCAGTACAACGTTTGATGAAATATCAATTGTTGTTGATCACCGCTAA
GAAATATTCAGAAAAATCTGTAGCCCATAAAATCGTTATAAAGgACGCGA
TAGAAGTGATGGACCGTGTGCCAAAACTCGCTAATGATGCAATGCATGTC
GAGCTGATCAAAGGATACGAAGGATTTCTACAATCTGAAGATCTGCTTTT
CCAGaccagctTGATGGGGATAACAGAGACAATACAGAACGAGCCATATT
CGTTTGCGATATTCTTTCGTAAGTTCAACAGCACAAATATCTACCAATGC
AAAGCTGACAACAAACAAACGAAAGATGAATGGATACAGGTCTTGAAAGA
CGTCATCGCACTCCAGATGATCATCATGAATCGAGCGAGTCAACACACAT
CACTGGATCGAATTGATGGCCACAAGAAACGTGAAGGCGTCTACAGGAGG
ACATCGCGTGGTAAATACGTTAACGATTTGGTCGTCGGCGAAACGTTACG
TCAAGCTTTACAAGGACATCCACGAATCGGGGAAATGTCTGAGAGACtga
aaaataacattgaaagaTATATTCTGAACGAGTTAATAATGGCGTCGGAA
GGCGACCCTTCGCATTTCAAACAACGATCGCAAAGTATCGTCCCGATTTC
CTCCTTAGTTGACGAGTGGGATTTAAAGCCGACTTGCCGACCAAGGTTTT
ATTCACAAATTGACTACACTCGGCCACCGTATATCAAAGACGCTCGCCCT
AAAGCAGCACTCGTTCAATCAATCACTCATGTTAGTTTTAATCAATTAGA
TGCttgatttccagggggttatgGTTGGCTATAATTGAGTACTTCAGATT
TTTAGATGAGTTATCTCAACGTTTTGACTTGTTTTAATCTTTCATATGTA
CGATTTAGCTTGCTCAGATCTTTGTCGAACATTGAACGACGTTTGTGTAT
AACTAAATCAGGAAAGTCATGTAACAAGAACTTTATGGTTGACCGGGAAC
TTTTAATCTATGAAATGTTTCAAAGTTATCAGATTAGCTAATTGTTCTGA
TAGTTTTGAGCTTTGGACTGGGAACGGTACTCGgaatatttttaacaaaa
tcttactTATATCGTGTtgttaaaatttattattctataaaaaatattaa
agtaTAAAAATGTAAATAGGAAAATTACAATCTTGATgggttgaaaaatt
taaatacgttataataaaa
Run BLAST on NCBI

transcript from alignment at scaffold_330:504884..517078+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059715 ID=TCONS_00059715|Name=TCONS_00059715|organism=Clytia hemisphaerica|type=transcript|length=12195bp|location=Sequence derived from alignment at scaffold_330:504884..517078+ (Clytia hemisphaerica)
AGATGGTTCAAAGTCATTATAGAGTTATAGACGAGGAAGGAAGCTTGGTC
AAGTTTTCAAACCAGGACATTTGAGAAGAAGGAAAGCTCTAAATTTAAAT
GGTATTGTTgtgttttcgtttttttttcgaacTTAATCATTTTCTTGAAC
AATGGTTATCAACAGTAAAAGCAAAATCATAACAAAAGTCAACATTCGAA
AAgccaaacaacaaaaacaagcgGCAGATAAAATGATCGAGAAAAATCGA
CCGTTACTTATCAGGGCGTATTCCGCTGAATCAAGCGGTGGTTATTCTTA
CGGGAAACGTAATAATGTATACGGAACAGCTCATTTGGAGTCATCCcgta
aagaaaagaaagtgGTACAGTTTTGTATGAGATATTTGAGCATGGCGATA
TGGGGAATACCAACTATGCAAGATACTCAAGGACTTCAAGGTAATGTATA
GTCATATCGATCTGGGCGGGCGGTCTGAAGGGCGTTATTGGTTGCGTATT
TCCATGATTGCCTTTTACACAATATACAAGGACCATTTTAGTTAACACGA
TTTTCTTTGGTTCCCTTAAACCTCAGTCAATGCTTCATGCTcatattgaa
atttgaaatcagaaaaactaattttctatttttcatccTGTGGATGCATG
GATATTTCTGTTATTCTTTTAATTACTTAATTACTCGTACATTTTGGGAA
AGGGGCCGTCTCCCCACTAAATGAAAATTCAGcaccattgatgacgtcat
cgcccGCTAATAGCGACGTTAAGCACGGGTTTAATTGAACCATAAAGTGC
GATACTGtataggcctgtacataacttgccaaagcaaatcatgcaagtga
aatcttatgtacaggcctacgataTCGCATTGAACGGTCTAAATAAACAC
CTGCTTAACATCACTGATAACAAACCAGCGTTCAGGAacgaatttcagtc
aaatcgaacGAGCCATCGGTCAGTACTATGTGATTTTAGCCAAACTCAAA
TTTTGAACTATCTGAACTTACTCGAACTtgtggaaattttcaaaaatttg
tgagaagttcgattagttcgattagttcgaggagttcgattagttccaTT
GAAAAAATGTTCGGGAAGctcaaattttcctattttatGAGATGGTACGC
CATGGTTGAATTAGAATTGgcagattttcaattttcaaacttactCGAAC
TTTACTCGTACTTTTAACATACTAAGGTATCCAAAGTTCGGCTAATTACT
CGAACTTCCTCGAacttatatttttgaaaaattgcgaGGAGTTCGAGTAA
TTTGTTTACTCGAGACCATGGCCTGTCGAAACTTTACTTATTCGAGTAAG
TTCGAGTAAAAAAGTGGTTCGGAAAGTTCGAGTAATGGGCTCAGATATAT
TGTTGTATGGATATGGAACTAATCTTCCACCCCTTCGCTTGTAGTATCTC
CTAATTTGAAGTTAAGATATGCTCTACATAACGTTCTTTTGAAACAGCCT
TACTTTAGACCTTAAACAATTTTGAATCAGgtcttaaatttatttttttt
aaagatcttaTAAAACAAATACTCTACTCATAACACAGGATAAAGATTTA
TAGTTTATCTGCTCTGAGGCAAATTAACGGATTATGATTACAAGAGTGAT
TCTACCCCCGGGTAGATTTTTAACATTGAAATTTAGTGGTAGGAAACAGA
GTTTAGCTTTGAATCATAATCCAAGTGCTAAAAAGCTATATATGGTTTGC
ATTTTGGAacgataatttttcgaaatccaatTTCTAAAAACAGAGTTGAA
AAATGGATTATGGCGACTTAAACAGTAAGAATAAATGGCGTGAGTTAAAA
AAGGACCTCCTTTGAATTTTTGAACAGTAGTCAATGGTTTTATCAGTGCC
GTGATAATTGAATTTTATGAATGACTTGTTAATTTTCTTCTCCATACACA
TTATAGATTTTTTGAGGTGATGCTATCGTCCAAATATTGCACGACCTACC
GTATTTACGTGACGTTCCGTTAGAGTATGTTTACTTGATTGATATTTATC
ATTCTTACGGCTAACTAATCAAAAGTTCGCTTAtattcaaatgtaaacat
ttccaaattaccgaatattttgagatataaacCAAGCTGGCTGCTAATAA
AAACGTTCAACAAAACCCTTCCAAATTATGTGCCAGCTTGGTTTTAACTC
ATTTCAAAGTGGCACAATCGGTATTCTTTGAGATTTTGGCGCCTTTGAAT
GTTGAGTGAATGTTAGCCGTAAATACAGTAAATGTCAACCAGGTAGATCT
ATATCGACATGTCGACATATTTAAAAACGGCTCCTTAAGCATGGGGAAAC
ATGGAACTGGATACAGGGGTTTCAATTAAATGATTGACATCTTTTACCTG
TATAGGAGGGCATTTGTTTACAAACTCCAAGGGTCTCAAAAACCCTAGAA
AGACGTAGAGTCGtggttttgaaaaaagatttttcgaaaatcggcaATAA
GACTAAAAGAAAGAAGGCTTTTTGACAAGCAGTCATtctgtttgaaaaaa
atagaaaattataaaaaatggaAATGTCTATCCGGCTTTtacgaatttga
aatttaaaaattttctatcATACGGTGAGGGAATACAAGCAAATGAGGCG
TTGACTGGGAAAGTATTTACCCTTTTTGAACCAAATATCTAGGCAAGAAA
TATCGCCCTACACAAATTTGATCATGAATCTTTCATGGTTGTTTTCTCAA
TTATCatattttattttcctttttataaATCCCTTTGTCTCTATCCCTGT
CTATTCAACAAAAGGGACCCGAaaatttctatctttttttGCCAATCAGA
CCTGTTTCCTTTATTTTTTGAGAAGGATGAAagtcagaaagaagaaaagt
gtGGTTGACCTGCACTTCCATATCCCACGTTTGTCTTATGAAATCTCTCT
TCACTTTTTCACCTTGAAAATAGGCGACGAGTGAAACATTTTTGACAATC
AAAGATAAGATATACAGATAAAATGATAGGTCTACAAATGAAAGGTGAGA
CACGATAAACTTTGAAGGAAGTTTAGATCTTGTGAAACTAAATTGGGAGa
cgataattacaaggtctcaaaagaaggttgtctattgctcattccgacat
cgactattaacctgactgaaattcgagccgttactagcaaccctgcgggg
cccaaggcgccgagtatgcacccggcacagtgacaagccgttactaggct
gcttgcatcctctaacgaattcgtgcttcttttagaggatgcttaatagt
CGGTAGATCCTCtttccagagatttgccgctcttagccgtatatcggcta
aagacAGTTTTTAGCTGGCGAGAGGTTAGAAANTACTGTTAcctaatcaa
ttccaaacaacaaaacccccggaaaatttaaaatgtcggaatgagcagta
gacaaccttcttttgagaccttgtaattatacTTTCCCAACTAAATTCCT
ATCTTCAAAGGTTGTTTCTAAAAACAAATTGTAGTGGTATACTCTCGAAT
TCCTAATAAAATTACAGTAACGAATAAACATATAGGGTTAAACATGTGGT
AACCATGATACAATTCGACCGCGTGAAGGCATAAAAATCTGATTGAAGGG
TCTTTTCAGGTTAGTTTAGGGGGTAAATAAAGGGTATTCTGCTTTCATTT
GATGAATAGATAAAACCTCCATAGTCAAAGATAGGTATTTAGCCTCAGAA
ACACAAGTAGGGACTTGAAATTGAGgaaaatctttgtcaaaattattaaa
cgtacatgtaccatttattaggcacccgagagtaatgCTGGATATCTAAG
GCATTGGCAAACTCAGTTTTGTCTTTGGTCAATCATCAGTTTTTGTTAGG
TTATGGGCGGTGATCATACCATTTTCGAATTTGAAAACGAAATTCGTCTT
CAAGTTCTTGAAGAACTGTTTTCAAGGGATATAGTGGGAATCGCACTTAT
GGTACTGCTCCTAATCTTGGCAGCGTCAAGTCTGACCAATGCAGACGTGA
TATGTTTTCAGTACTAAGCATTACAAAGTTGCTTCTTTTGGTAAGATATA
TTCCTCTTAAAAGTACAGTAGGGCCGTGGATTATTCAAACACAATTTCTC
CTTTCTTTGTAGCGATTCCTGAACGGCCCGAAAGTGTCATCGAAGATCAG
AACAACAACATCCTCAACAGCGACCATCTTCAGAAAGCCAACAAAAGGAA
ATTGCAAAAATCATATAATCCTGTAACCAACATGGCGTCACAACCACAAG
ACCATGAGTGCACatattgtttaaaaatcttcCAAAGTAAAGCCACACTG
GATATCCATTTGATGACGAAAAGACACGATTGGCAATTAAAGAAAGCTAT
CGAGAACATGGATTCCATAAATAATGAAGTGACAACTGAGGACGACTTCG
CCAAACATTATTTGACGAGTGGAAGGAATGGtaaagatattttatttttt
tgcttataaaacaaCAGTACTAACATCAGTCCTTTTTTGTAAGTCTCCAT
AGATAGagttttctggtcccttcagATTTAACAAGTCACTATAACTTGAA
TTTCCCACTCTCGAACAATATTTAATTCACCAGTACATGTTCAAGATATA
GAGACTCGACTGAAGTTTATACAAGAATTAGGAATGTGTGGCTGAATATT
TGGAGTCAGAAATAGTAGTAGTAGTTGGTTGGTCTACAGGTTAAAAGGGA
GGGTACTACCAGGGACGGCCACATTAACCAAACCTAGTTCCAAGCTGCTT
GAACAATTTTGGAAACAAGGGGAATAGTTAGAAACATCGATAAAGTAAGC
ATCATTTTAACCCCTTTCTTATCTCTTTTTATTTGACATAGAAACCCAAC
AAGAACATTCTCCAACTCTTTGTAAAGAAGGTCGTTATTCAAACGGCTCA
CTCGTTTCAAGCGAAGAAGGATATTACAGTACGGATAGCGATGAAACGAA
ACACATGAACACTTACTCTACGACCACCGCCAACGGGCCCTCGTGTCAAC
GGCGTGGCGGTGTCATAGCTAACGGGGCGGTTGATATGGCGTCATATAAG
CAACGCCCATCTGTGATACGGCTAAAACGTATGAAAATGGAGGAGCTTAA
AGAGATATATAAACAGTATGCTGCTTCGAGAGGCTCTGGGGATTTATATA
AAAACTTACTAGACACTTATGTGGATTTCAATTTCTATCCGGACGCTGAG
AATCGTCAGTTTTCGGACAGTGAGGTAGTTAACGTTTCAGCAAAGTCGAA
TCGAAAATATAGCGTTTCGGAGAAAGAGGCGCTGATGCGAAGAGATTTGG
TTTTGACGGAGATGGCGGATACGGAGAAGAATTACGTAGACGACCTCGCG
TTCATTATTAACGTAAGGAGTTtatatagcttttaacaatCACAATACGG
GAGATTGGGTACGGGTTTACCAGGGTCTGAATGACGTTGATAATCGGTTA
CCTTTTTTCGTTCGATATCTTTTTTGCGGCTTAAGGTTTTTACTGAGGAT
AGATTTATTCATTTTACTCATCAGTCAAAAGTGCACTGGTGAAAACACCA
AAGATTCTCTCTAAGATCTGATAATTTTTAACTACAGTACTAATCGAtat
gctccattattcgatagaTATCCAAtccccccttgaaaatcgaatcaaCG
AGTGTCAATTGTACAGTCTTTTCACTCTTACTAGGATATCTTCGAACAAA
ATCATTATCATTTGTCCTCTTAGTTGGGAAGTAGTGTAAAACGCATCTCT
ATAATTCAAAACTTTgtctaattcgaagaaatgtCTTAGTCACAAAGTAG
AGAGATGCAACCGTAGATTTATTGAAGCTGAATTTCATTAAATGTATAAC
AAATACAAAATTTCAGGAGTACTTCCCCTTGATGGATAAAGATGAAGTGT
CAGAAGACTTGAATGGCGATTTCGAAAAGATATTCGGAAATATCcaagaa
atttataaatttcacTCAAGGTACGATTTTTACACATCCAAAATTTATAT
TTCGACCCTGTCTCTACTGCTGACTTTGGAGTTGGGATTAAGGCTTGCCT
TATAGATATTTGAAACAAAAGATCCGAATCGCTGAGACCAGTTAGGGGCT
TGGTAAATAgtgatatttttatatttatctttCTCGGTAGGATATTTTCT
GAGAAGATCGAAGATTGTTTAGAAGATCCACAATTACTGAACGAAACATT
TTGTCAATACGTACGTTTGTATTTAACTTGTCTGTTTCGTGTCAACATTC
CAATAGCGACTACAATTAATATGTAATCGTGttgttcattttcatttttg
ttttgaatgagTGTTCTTAGTAtgggaaaattattttaaggACCTTTTCA
CACTGAACTACCGAGGAACTGAAGCACTCCAAAACTCAAACGCAAAAATC
TACATCATACAAGTCCTACGATATTTTTTCTCTGCTTCTAAANCTTTATA
CAAGAATTAGGAATGTGTGGCTGAATATTTGGAGTCAGAAATAGTAGTAG
TTGGTTGGTCTACAGGTTAAAAGGGAGGGTACTACCAGGGACGGCCACAT
TAACCAAACCTAGTTCCAAGCTGCTTGAACAATTTTGGCGACTAAAGGGG
AATAGTTAGAAACATCGATAAAGTAAGCATCATTTTAACCCCTTTCTTAT
CTCTTTTTATTTGACATAGAAACCCAACAAGAACATTCTCCAACTCTTTG
TAAAGAAGGTCGTTATTCAAACGGCTCACTCGTTTCAAGCGAAGAAGGAT
ATTACAGTACGGATAGNTTCTCCAACTATTTGTAAAGAAGGTCGTTATTC
AAACGGCTCACTCGTTTCAAGCGAAGAAGGATATTACAGTACGGATAGCG
ATGAAACGAAACACATGAACACTTACTCTACGACCACCGCCAACGGGCCC
ACGTGTCAACGGCGTGGCGGTGTCATAGCTAACGGGGCGGTTGATATGGC
GTCATATAAGCAACGCCCATCTGTGATACGGCTAAAACGTATGAAAATGG
AGGAGCTTAAAGAGATATATAAACAGTATGCTGCTTCGAGAGGCTCTGGG
GATTTATATAAAAACTTACTAGACACTTATGTGGATTTCAATTTCTATCC
GGACGCTGAGAATCGTCAGTTTTCGGACAGTGAGGTAGTTAACGTTTCAG
CAAAGTCGAATCGAAAATATAGCGTTTCGGAGAAAGAGGCGCTGATGCGA
AGAGATTTGGTTTTGACGGAGATGGCGGATACGGAGAAGAATTACGTAGA
CGACCTCGCGTTCATTATTAACGTAAGGAGTTtatatagcttttaacaat
CANTTAAAAGGACAGATAATGTAGTTATGTCAGTTCAACTTAAATAGTTG
ACTTTTTTTCCAATGGGTGAAATTTCGATGCTTTTTCCAATTAGGATAAA
ATTTCAGAACGTTTTTCCACATTCTTAGCCTATTCTTCTTTGGGGTAAGG
TAAAACACGAGAAgcgacacaggggtgtatgtgtatgtttagaaaatttg
atttctattGTTTCATCTTTTGACAGGAGGACGAGCTAGCCACATTATAT
TCACAATACTGCAAATGCAAACCATATGCTGACGAAGCATTACATAATCA
TCAAGACGAAATCGACATGGTAAGTTTTATTATCGTGACATAACAGTATT
CAGAGCACTTATAGCGGCTGAAATACTGTAAGATCGACCTGGGGAGGGGC
AATGGGATTGCCAACTAACGGTAAGTGCGTCGATTGTTCCCACGGGAGAC
AAACTTGCTAGTCTGGGCACTGTAGACACAGTTCTGGCCTGTGTATAAAG
TTTACAATGAATGGTTCATGTAAAAACACGTACGTACAAAAATCATGTAT
CCATAAGGAAGCTTTAATTGGAATTGGCCCGATTCTGAGAGAAAACTCCA
GCGTGTTAATTCTGACCATTTCATAATTAGTCATTTCCGTATAGCCGGCT
CATTAAGCTAAATTTTCTTGCAAAGGAATTGCTTTGCGTGGGTCGTTGTA
CTTTACAGCCATGCTTTATCTTAACGTAAAAGAAAGTAACTTAATTAACT
ATTTTTTTTGCACAGAACGTAGCTAAAATGGCTGAATTTCACTTCTCTTA
GACTTCCTTTCATATCAAAGCGTGTTGCGTGGGATGTGCGTAAAGAGCGA
GGGGTCACCATCCATagtaaaacctttaaaaaggcAAAATGACAAACCAA
AGTCAGTTGACATATAGCATAGGCACAGGCTCATCACTGTATCACTAGTG
TAACGACTGTGTCAGCTTTACTAGAGATATCCTGCCCATGCTAGAAATCT
CATCTGGGGACAGCATCATTAAGTAAAGAAGCTGTTCATGTGGTTTAACT
TGGAGTATCaattaaaaataatctttatCTATTTTTCTACAGCTACGTCG
AAAATATTTACCAAAAGTGAAATTCTTGTTGAAAGATTATTTGGTGACAC
CAGTACAACGTTTGATGAAATATCAATTGTTGTTGATCACCGCTAAGAAA
TATTCAGAAAAATCTGTAGCCCATAAAATCGTTATAAAGGTAGGTTGGTG
TgttaaaatttgaatggcaTGAGTTCTCAATCGTTATTTAAATCTGTCAC
CAtcggctgcgtttagaccaactggcatttgtaatttggcatttgctcat
gagggattcgattttaatagcttttccattgtattttctgtcatggcatt
taaggaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNgattccctcaagttcaactttgacagatcaaacaa
tgaaaagcatagaatttctcaaaaactgcagtcattaagactgaaacttt
ttgccgtagggctaggctatggcaaatctttcaaactttacaatctatag
aaagaactgaataaaaaacgtgcaaatactttaaaaaatcaaaaatgtca
tttttctctttgtttcggttcctttgtttggtttgaaatgccagaaaagg
ggattcctttgctcaaaatggcatttcaaatgccaacgaaataccaacac
gctggcatcattaggcatttgacaaaccgaacaattgcgcggaacaatag
aattcaaaagaatactgtaagcaattacaaatgccaggctggtctaaacg
atGCCATCCTTAACCAGGACAAATGGATGTCATTAAttaaagaaacacac
ttttagtATAATTGTGACCTCGTTGGCTGCGAATTCACATTAAGGAACAC
GTCCCCAAGTGTTTCCGATATTTTCTTAATTGCTCTTTCTCAAGAGCAGC
CACTCCTGCAGGTTAGATATAAGGAGAACATCTATGTAAACTATTAAAAA
CAACCGAAAAAATCTGTCGATATTTCCCTATCGCGATGAAAGTGAACAGT
CACTTTATCATTTAAactattttctttctcacaggACGCGATAGAAGTGA
TGGACCGTGTGCCAAAACTCGCTAATGATGCAATGCATGTCGAGCTGATC
AAAGGATACGAAGGATTTCTACAATCTGAAGATCTGCTTTTCCAGGTAGG
TTCGTTGTTTTTACCCAACTGGTGAAGAACCATAAAGTGTAATCTCTGAG
CATATTTCGAATTGTATACAAGGGTGAACTTAGAAAGACTATGTAGGTAA
ATTAGTCGTATGGGCAACTCCCAACACCTTCGCGATTTTGGAGATCGGAC
TTCCCTCCTGGACAATTCGAATATGGAAAAAACCATCCAGGGCTGGACTG
TTAGTATccctctgttttgttttgttatagAGGCTCGAATCAGCCTCAAT
TATCATTCTTACTTAGTGATTTTTACTTTATCATACAAATTATTTAAGAT
GGAAAtctgtttttaaaaagagtTATAATTTTTGGATCGAGTTAAGTTAA
ATAAACCCACAGTGACACCACAAAACATCTGCTAAGCTGAAGCGTTTTTG
AGTCTGCATGGCCTACCATGTTTTACAATTTCTACTTCCAGGAAGTGATC
GAAGTTGACCCAGCACCCAAAGACAATAAATGTAAACCGAGAGAAATGCG
TGTCTTCATATTCGACAGTATGGTCATGTTTTGTGATATCGTGCCACGGA
AAGGACAACTAGCTGTTTATAAATATGTCGGCTCTGGTCAGGTGAGTCTA
TTTGAAGTGAGGAAAACAATTGTATCGGAATTATATTTAGTCTGGATAGA
ATGTCTTCGAAAACAGAAATTAGTAATAGATCGAGTAAGTTCATAACTAA
TGCTGCCGTATCTTTCAATGTTTATTGCtgtcattaaattttgagaCAGT
CTAAAGGACAACCAATTTTCGTATGATTAAATTTGAAGCTGGTAGCTATT
GCACCACTACCACTCTCTAAATGAAAATAcagaaaagaaatgaaagagTA
TGCTAGTCTAGAACTgttcgtgtattttacagaccagctTGATGGGGATA
ACAGAGACAATACAGAACGAGCCATATTCGTTTGCGATATTCTTTCGTAA
GTTCAACAGCACAAATATCTACCAATGCAAAGCTGACAACAAACAAACGA
AAGATGAATGGATACAGGTCTTGAAAGACGTCATCGCACTCCAGATGATC
ATCATGAATCGAGGTACAGACGTCAAGACATCGTCCATATAACGTCCATA
CTCTTtaattcgatacgctccattattcgatgaaaatccaatgcTCCTTG
CAAATCGAAATAGCGAGCGTTAATTGTATATTTGAGTTTATTCTCGATTG
TTCGAACTCGAACGTGGAAATCTGATTTCTTCCAATTAAAAAGAGATCCG
AaataatcttttctttttgacgGGAAAATCATAGAAAGATTAGATTTGAA
CTCACTGAAACACTCCTTATCAATCATCTCTTCTCTCGATTGGTTAATTT
CCATAATACCTATTACATGGCTAGATGATTAGGTTCGGGTTAGAGAATAG
CGCCGTTGTCTGTATTTGCGTGCCAATGAACCGCAAACTTTGACATCATT
CAGTCCTTTGAAACTGAAGTAACCCATCCCTGAAGCTTTTGGGGGTAAGG
GTTAAAAAATGATAATCTTGCATCTTATATTTAACAGCGAGTCAACACAC
ATCACTGGATCGAATTGATGGCCACAAGAAACGTGAAGGCGTCTACAGGA
GGTGAGGTCCTTTCAAACATAGAGTTTGTAACTATGGTTTCCATTCCTTT
CGATTGCACGTGAATTTGCCCGAGAAACATTTCTTGGAATTTAGTTAAAA
AACCACAATAGTTTCTGGCTATAGATTGGAGCATATTTGGTAACTCGTTC
TCGGTAATACGATCATGGGGTAGTATACAGATTTTTGATGATTTAAAAGG
AAGTTTTATTTTCCTTCTATCGTAGGACATCGCGTGGTAAATACGTTAAC
GATTTGGTCGTCGGCGAAACGTTACGTCAAGCTTTACAAGGACATCCACG
AATCGGGGAAATGTCTGAGAGACtgaaaaataacattgaaagaTATATTC
TGAACGAGTTAATAATGGCGTCGGAAGGCGACCCTTCGCATTTCAAACAA
CGATCGCAAAGTATCGTCCCGATTTCCTCCTTAGTTGACGAGTGGGATTT
AAAGCCGACTTGCCGACCAAGGTTTTATTCACAAATTGACTACACTCGGC
CACCGTATATCAAAGACGCTCGCCCTAAAGCAGCACTCGTTCAATCAATC
ACTCATGTTAGTTTTAATCAATTAGATGCttgatttccagggggttatgG
TTGGCTATAATTGAGTACTTCAGATTTTTAGATGAGTTATCTCAACGTTT
TGACTTGTTTTAATCTTTCATATGTACGATTTAGCTTGCTCAGATCTTTG
TCGAACATTGAACGACGTTTGTGTATAACTAAATCAGGAAAGTCATGTAA
CAAGAACTTTATGGTTGACCGGGAACTTTTAATCTATGAAATGTTTCAAA
GTTATCAGATTAGCTAATTGTTCTGATAGTTTTGAGCTTTGGACTGGGAA
CGGTACTCGgaatatttttaacaaaatcttactTATATCGTGTtgttaaa
atttattattctataaaaaatattaaagtaTAAAAATGTAAATAGGAAAA
TTACAATCTTGATgggttgaaaaatttaaatacgttataataaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037561XLOC_037561Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059715-exon-scaffold_330-1491911889:504884..505323TCONS_00059715-exon-scaffold_330-1491911889:504884..505323Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:504884..505323TCONS_00059715-exon-scaffold_330-1510915933:504884..505323Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:504884..505323TCONS_00059715-exon-scaffold_330-1575043694:504884..505323Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1491911889:509046..509363TCONS_00059715-exon-scaffold_330-1491911889:509046..509363Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:509046..509363TCONS_00059715-exon-scaffold_330-1510915933:509046..509363Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:509046..509363TCONS_00059715-exon-scaffold_330-1575043694:509046..509363Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1491911889:509775..510295TCONS_00059715-exon-scaffold_330-1491911889:509775..510295Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:509775..510295TCONS_00059715-exon-scaffold_330-1510915933:509775..510295Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:509775..510295TCONS_00059715-exon-scaffold_330-1575043694:509775..510295Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1491911889:510800..510903TCONS_00059715-exon-scaffold_330-1491911889:510800..510903Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:510800..510903TCONS_00059715-exon-scaffold_330-1510915933:510800..510903Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:510800..510903TCONS_00059715-exon-scaffold_330-1575043694:510800..510903Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1491911889:511074..511143TCONS_00059715-exon-scaffold_330-1491911889:511074..511143Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:511074..511143TCONS_00059715-exon-scaffold_330-1510915933:511074..511143Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:511074..511143TCONS_00059715-exon-scaffold_330-1575043694:511074..511143Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1491911889:512460..512552TCONS_00059715-exon-scaffold_330-1491911889:512460..512552Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:512460..512552TCONS_00059715-exon-scaffold_330-1510915933:512460..512552Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:512460..512552TCONS_00059715-exon-scaffold_330-1575043694:512460..512552Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1491911889:513326..513472TCONS_00059715-exon-scaffold_330-1491911889:513326..513472Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:513326..513472TCONS_00059715-exon-scaffold_330-1510915933:513326..513472Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:513326..513472TCONS_00059715-exon-scaffold_330-1575043694:513326..513472Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1491911889:514368..514478TCONS_00059715-exon-scaffold_330-1491911889:514368..514478Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:514368..514478TCONS_00059715-exon-scaffold_330-1510915933:514368..514478Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:514368..514478TCONS_00059715-exon-scaffold_330-1575043694:514368..514478Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1491911889:515366..515546TCONS_00059715-exon-scaffold_330-1491911889:515366..515546Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:515366..515546TCONS_00059715-exon-scaffold_330-1510915933:515366..515546Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:515366..515546TCONS_00059715-exon-scaffold_330-1575043694:515366..515546Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1491911889:516021..516084TCONS_00059715-exon-scaffold_330-1491911889:516021..516084Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:516021..516084TCONS_00059715-exon-scaffold_330-1510915933:516021..516084Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:516021..516084TCONS_00059715-exon-scaffold_330-1575043694:516021..516084Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1491911889:516309..517078TCONS_00059715-exon-scaffold_330-1491911889:516309..517078Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1510915933:516309..517078TCONS_00059715-exon-scaffold_330-1510915933:516309..517078Clytia hemisphaericaexon
TCONS_00059715-exon-scaffold_330-1575043694:516309..517078TCONS_00059715-exon-scaffold_330-1575043694:516309..517078Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:504884..517078 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.0553859	0.242189	0.0038275	0	0.0310235	0.0167334	0	0.0616822	0	0	0.16365	0	1.36794e-06	0.00595814	0.00368601	0	0	0	0.0732577	0	0	0.543024	0.00279598	0	0
Blast
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BLAST of TCONS_00059715 vs. Swiss-Prot (Human)
Match: ARHGP (Rho guanine nucleotide exchange factor 25 OS=Homo sapiens GN=ARHGEF25 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 2.100e-33
Identity = 80/215 (37.21%), Postives = 123/215 (57.21%), Query Frame = 2 
Query: 1187 EKEALMRRDLVLTEMADTEKNYVDDLAFIINEYFPLMDKDEVSEDLNGDFEKIFGNIQEIYKFHSRIFSEKIEDCLEDPQLLNETFCQYEDELATLYSQYCKCKPYADEALHNHQDE-IDMLRRKYLPKVKFLLKDYLVTPVQRLMKYQLLLITAKKYSEKSVAHKIVIKDAIEVMDRVPKLANDAMHVELIKGYEGFLQSEDLLFQTSLMGITE 1828
            +K+AL R   VL+E+ +TEK YVDDL  I+  Y   M    V E L G    +FGNIQ+IY++H   F ++++ CL+DP  L + F ++E  L  +Y  YC+ KP ++  +    D   + LR++   +++  L D L+ PVQR+MKYQLLL    KY  ++      ++ A+EVM  VPK  ND M +  ++G+EG L ++  L       +TE
Sbjct:  154 KKKALERSMYVLSELVETEKMYVDDLGQIVEGYMATMAAQGVPESLRGRDRIVFGNIQQIYEWHRDYFLQELQRCLKDPDWLAQLFIKHERRL-HMYVVYCQNKPKSEHVVSEFGDSYFEELRQQLGHRLQ--LNDLLIKPVQRIMKYQLLLKDFLKYYNRAGMDTADLEQAVEVMCFVPKRCNDMMTLGRLRGFEGKLTAQGKLLGQDTFWVTE 365
The following BLAST results are available for this feature:
BLAST of TCONS_00059715 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARHGP2.100e-3337.21Rho guanine nucleotide exchange factor 25 OS=Homo ... [more]
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