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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059765 ID=TCONS_00059765|Name=TCONS_00059765|organism=Clytia hemisphaerica|type=transcript|length=1421bp
ATTCTATTGAATCTTAATTTACAAACGTTTTGATTAATAAATTAGTTACA
ATATTTTgataacaattttccaaaaagccACAGCGTAATGTAGTAAGTAT
GTTTAAACATTATCTCTACTTATTTACAAATATTTACAAATCCCAAAGCG
CACAAAGTTTTTGTTGTACAGTATTAGTCTGAATTGCAGAACCACTGGTA
AAATAGGAAGATGGGATCATTCTAAAGTTCTGTATGTCGAAAAGACCGGC
AGCCGACCGCTAATTCACCGTTTCCTTGGTCGTTGACATCATGCTTGTTT
CGCCTGCCAATCGACTGTTTTGTTTCCATAGCGACATCAAATCTTTTCGG
AAGGATTTGCTTGACCAGCAATAGAGCAAAAAGTTGATTCCGTTATTTGT
GTACCAAAGTTTATGACAAATGTGGTGTCCAAGGTTGTAATTGGCTTGTG
TTTGTGGCGAAGACTGACTGATGTCGAAGCGAGCGTAATACAAGCGGAAT
ATTAGAAGCGGACATGTTGTTATGATGAACATCGTAGAGACGAGAAACAA
AATTCGAGTTAATGCTCTCTCAGTCTTCCGCTTCTTCTTACAGGCTTCGT
TTGATTCGTTCTGGTTAGCGGTTAAATCACCTGGTTGCACCTTCGATCTT
TGCTTGATTTTGACGATGATCAAGATGTTACAAAGCAGGATCATGATGAA
GGGTACAAAACTCGAAATGGTTACTTCGAAAACTTGATACTTTGCTACCC
AGGGTGCTTTGTTTTTCAGCCCGAAAGCACAGATAGCTATCCCCGATTCC
GGGTTCAAGAAGAAATCGGTTGTCCACAGGtaatgaaagtttttgatgaa
aGCTACGGCACCGATAATAGCGATACACATCAGACCTTTAGAGACGGTCA
AAAGTTGAAGGCCTTTCATTGGATAACGTATGGCGATGAAACGATCGATG
GAAAAGCAGACGATGATCCAATGAGAATAATTGCCAAAGAAATTGACGAC
GAAGAACATTCCTTTGCAATGTGCTTCAGTTAACACACGAGGTTCGAAAT
TGAAGAGGATCCAATATTGAAGAAGACCAACCAACAACATTAATGAATCC
AAGATGGAGAGGGCTAAGATTAGATAGGTCGACGAACGATTGCGATGTTT
CTTGTCTTTGTAAACTAAGAAACTCAGGATGTTTCCGATTGTCCCAAAGA
ACACCAAACATGGTGGATAATACAAATTGATTTGAGCACCCACCTTAAAC
TCTGACAATTGGCTTGCGTTGCTTGACATGATTCTTTAAGTGGAAAAATG
AATTTCTGAAAACATTTATTTATCAAGTATgtctgaaatgaaaaatagaa
gaatTAATTAAATAGTTTCGTTGAAAAGAGTTATATTTAGACAGCTGATT
ACAAAATAGGGCTTCCTCTTC Run BLAST on NCBI protein sequence of Seven transmembrane protein >TCONS_00059765-protein ID=TCONS_00059765-protein|Name=Seven transmembrane protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
MSSNASQLSEFKVGAQINLYYPPCLVFFGTIGNILSFLVYKDKKHRNRSS
TYLILALSILDSLMLLVGLLQYWILFNFEPRVLTEAHCKGMFFVVNFFGN
YSHWIIVCFSIDRFIAIRYPMKGLQLLTVSKGLMCIAIIGAVAFIKNFHY
LWTTDFFLNPESGIAICAFGLKNKAPWVAKYQVFEVTISSFVPFIMILLC
NILIIVKIKQRSKVQPGDLTANQNESNEACKKKRKTERALTRILFLVSTM
FIITTCPLLIFRLYYARFDISQSSPQTQANYNLGHHICHKLWYTNNGINF
LLYCWSSKSFRKDLMSLWKQNSRLAGETSMMSTTKETVN Run BLAST on NCBI transcript from alignment at scaffold_330:224867..226287 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059765 ID=TCONS_00059765|Name=TCONS_00059765|organism=Clytia hemisphaerica|type=transcript|length=1421bp|location=Sequence derived from alignment at scaffold_330:224867..226287 (Clytia hemisphaerica)
GAAGAGGAAGCCCTATTTTGTAATCAGCTGTCTAAATATAACTCTTTTCA
ACGAAACTATTTAATTAattcttctatttttcatttcagacATACTTGAT
AAATAAATGTTTTCAGAAATTCATTTTTCCACTTAAAGAATCATGTCAAG
CAACGCAAGCCAATTGTCAGAGTTTAAGGTGGGTGCTCAAATCAATTTGT
ATTATCCACCATGTTTGGTGTTCTTTGGGACAATCGGAAACATCCTGAGT
TTCTTAGTTTACAAAGACAAGAAACATCGCAATCGTTCGTCGACCTATCT
AATCTTAGCCCTCTCCATCTTGGATTCATTAATGTTGTTGGTTGGTCTTC
TTCAATATTGGATCCTCTTCAATTTCGAACCTCGTGTGTTAACTGAAGCA
CATTGCAAAGGAATGTTCTTCGTCGTCAATTTCTTTGGCAATTATTCTCA
TTGGATCATCGTCTGCTTTTCCATCGATCGTTTCATCGCCATACGTTATC
CAATGAAAGGCCTTCAACTTTTGACCGTCTCTAAAGGTCTGATGTGTATC
GCTATTATCGGTGCCGTAGCtttcatcaaaaactttcattaCCTGTGGAC
AACCGATTTCTTCTTGAACCCGGAATCGGGGATAGCTATCTGTGCTTTCG
GGCTGAAAAACAAAGCACCCTGGGTAGCAAAGTATCAAGTTTTCGAAGTA
ACCATTTCGAGTTTTGTACCCTTCATCATGATCCTGCTTTGTAACATCTT
GATCATCGTCAAAATCAAGCAAAGATCGAAGGTGCAACCAGGTGATTTAA
CCGCTAACCAGAACGAATCAAACGAAGCCTGTAAGAAGAAGCGGAAGACT
GAGAGAGCATTAACTCGAATTTTGTTTCTCGTCTCTACGATGTTCATCAT
AACAACATGTCCGCTTCTAATATTCCGCTTGTATTACGCTCGCTTCGACA
TCAGTCAGTCTTCGCCACAAACACAAGCCAATTACAACCTTGGACACCAC
ATTTGTCATAAACTTTGGTACACAAATAACGGAATCAACTTTTTGCTCTA
TTGCTGGTCAAGCAAATCCTTCCGAAAAGATTTGATGTCGCTATGGAAAC
AAAACAGTCGATTGGCAGGCGAAACAAGCATGATGTCAACGACCAAGGAA
ACGGTGAATTAGCGGTCGGCTGCCGGTCTTTTCGACATACAGAACTTTAG
AATGATCCCATCTTCCTATTTTACCAGTGGTTCTGCAATTCAGACTAATA
CTGTACAACAAAAACTTTGTGCGCTTTGGGATTTGTAAATATTTGTAAAT
AAGTAGAGATAATGTTTAAACATACTTACTACATTACGCTGTggcttttt
ggaaaattgttatcAAAATATTGTAACTAATTTATTAATCAAAACGTTTG
TAAATTAAGATTCAATAGAAT Coding sequence (CDS) from alignment at scaffold_330:224867..226287 >TCONS_00059765 ID=TCONS_00059765|Name=TCONS_00059765|organism=Clytia hemisphaerica|type=CDS|length=1020bp|location=Sequence derived from alignment at scaffold_330:224867..226287 (Clytia hemisphaerica)
ATGTCAAGCAACGCAAGCCAATTGTCAGAGTTTAAGGTGGGTGCTCAAAT
CAATTTGTATTATCCACCATGTTTGGTGTTCTTTGGGACAATCGGAAACA
TCCTGAGTTTCTTAGTTTACAAAGACAAGAAACATCGCAATCGTTCGTCG
ACCTATCTAATCTTAGCCCTCTCCATCTTGGATTCATTAATGTTGTTGGT
TGGTCTTCTTCAATATTGGATCCTCTTCAATTTCGAACCTCGTGTGTTAA
CTGAAGCACATTGCAAAGGAATGTTCTTCGTCGTCAATTTCTTTGGCAAT
TATTCTCATTGGATCATCGTCTGCTTTTCCATCGATCGTTTCATCGCCAT
ACGTTATCCAATGAAAGGCCTTCAACTTTTGACCGTCTCTAAAGGTCTGA
TGTGTATCGCTATTATCGGTGCCGTAGCtttcatcaaaaactttcattaC
CTGTGGACAACCGATTTCTTCTTGAACCCGGAATCGGGGATAGCTATCTG
TGCTTTCGGGCTGAAAAACAAAGCACCCTGGGTAGCAAAGTATCAAGTTT
TCGAAGTAACCATTTCGAGTTTTGTACCCTTCATCATGATCCTGCTTTGT
AACATCTTGATCATCGTCAAAATCAAGCAAAGATCGAAGGTGCAACCAGG
TGATTTAACCGCTAACCAGAACGAATCAAACGAAGCCTGTAAGAAGAAGC
GGAAGACTGAGAGAGCATTAACTCGAATTTTGTTTCTCGTCTCTACGATG
TTCATCATAACAACATGTCCGCTTCTAATATTCCGCTTGTATTACGCTCG
CTTCGACATCAGTCAGTCTTCGCCACAAACACAAGCCAATTACAACCTTG
GACACCACATTTGTCATAAACTTTGGTACACAAATAACGGAATCAACTTT
TTGCTCTATTGCTGGTCAAGCAAATCCTTCCGAAAAGATTTGATGTCGCT
ATGGAAACAAAACAGTCGATTGGCAGGCGAAACAAGCATGATGTCAACGA
CCAAGGAAACGGTGAATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059765-exon-scaffold_330-1491911889:224867..226287 | TCONS_00059765-exon-scaffold_330-1491911889:224867..226287 | Clytia hemisphaerica | exon |
| TCONS_00059765-exon-scaffold_330-1510915933:224867..226287 | TCONS_00059765-exon-scaffold_330-1510915933:224867..226287 | Clytia hemisphaerica | exon |
| TCONS_00059765-exon-scaffold_330-1575043694:224867..226287 | TCONS_00059765-exon-scaffold_330-1575043694:224867..226287 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_330 | supercontig | scaffold_330:224867..226287 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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