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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059677 ID=TCONS_00059677|Name=TCONS_00059677|organism=Clytia hemisphaerica|type=transcript|length=432bp
AGTTTCTTTTAAGCTTATACCCAATTTGTACAATTTATTTTGACCCttct
gacacccctgtctcacgtgtaccggtggaacttcttcccacagtcgggat
aaaaatttctattgaaatcccagggggtgatagaaattctattcttCCCA
GGTCAGAAGATCCAGTTtcgatggttttggagtgcaattttttccatCGA
ATTTCAAATTGGgatgaaaacattttcaagtGGGTGAAATTGTAGGGCAT
CCTTCCCACCGGGGAGGAACTATTAGCAAAATTTTCCATTGTGAAAGTAG
CCCAACCGGGTCTGGTACACAGaTTTAATCAATGCGCACCCCATGGTTGT
TTAAATCACGGTTGTCAAAAAAAAGACGATATATAGATATGTTTAAATCA
GAAAGgctgattttggagacatgatGGCATAG Run BLAST on NCBI transcript from alignment at scaffold_330:199622..200683+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059677 ID=TCONS_00059677|Name=TCONS_00059677|organism=Clytia hemisphaerica|type=transcript|length=1062bp|location=Sequence derived from alignment at scaffold_330:199622..200683+ (Clytia hemisphaerica)
AGTTTCTTTTAAGCTTATACCCAATTTGTACAATTTATTTTGACCCttct
gacacccctgtctcacgtgtaccggtggaacttcttcccacagtcgggat
aaaaatttctattgaaatcccagggggtgatagaaattctattcttCCCA
GGTCAGAAGATCCAGTTtcgatggttttggagtgcaattttttccatCGA
ATTTCAAATTGGgatgaaaacattttcaagtGGGTGAAATTGTAGGGCAT
CCTTCCCACCGGGGAGGAACTATTAGCAAAATTTTCCATTGTGAAAGTAG
CCCAACCGGGTCTGGTACACAGGTTTGTCTTCTGCAATTAcgaaagtttc
ttgtttttttgGGGGGAAATCTGGCACTCAGATTGGCTCTTTAATGCAAC
ATtcctggatgttcttattttttcctaaatttcagcctaaatgttcttat
aaattaggTTCTAATGAAATGATGTAAAGCCAAAAACCTTCAAACCACCA
TCATCGCTCAAGTTTTCCTCCCTTCGACAGGTTCTTTCTGgacggaaaat
ttaaaataaagaaatccAGTCTTCATTCAAGTTTTGTGAAACATGAATGT
TTAGtatgaaaatttcatatttgacaaaagaatattttgttgGTACATAC
ATTTTTAAAGAGGGTAAGGTCGAAGTTTATCCCCTTCTTCAAAAGTTTTT
CCgtaaatattgatattttacaATAACTTAGAGGCTCGAAAAAGTAAAGT
GAAACGTTGAAAGGCTagacaaaaaaaatgtttttcgagaGACTTTAATC
AAACCTTCTTTATGGCTTGCCTGCctgtgatattttttggattccTTCAT
TGTTTGGTTGGTATAGTTGTCAGACCTtgcattttgataaaaacatgaCG
ACCACGGTCAATTCCAATGGATTTATgccaatctttttttttgtactttt
agaTTTAATCAATGCGCACCCCATGGTTGTTTAAATCACGGTTGTCAAAA
AAAAGACGATATATAGATATGTTTAAATCAGAAAGgctgattttggagac
atgatGGCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059677-exon-scaffold_330-1491911889:199622..199943 | TCONS_00059677-exon-scaffold_330-1491911889:199622..199943 | Clytia hemisphaerica | exon |
| TCONS_00059677-exon-scaffold_330-1510915933:199622..199943 | TCONS_00059677-exon-scaffold_330-1510915933:199622..199943 | Clytia hemisphaerica | exon |
| TCONS_00059677-exon-scaffold_330-1575043694:199622..199943 | TCONS_00059677-exon-scaffold_330-1575043694:199622..199943 | Clytia hemisphaerica | exon |
| TCONS_00059677-exon-scaffold_330-1491911889:200574..200683 | TCONS_00059677-exon-scaffold_330-1491911889:200574..200683 | Clytia hemisphaerica | exon |
| TCONS_00059677-exon-scaffold_330-1510915933:200574..200683 | TCONS_00059677-exon-scaffold_330-1510915933:200574..200683 | Clytia hemisphaerica | exon |
| TCONS_00059677-exon-scaffold_330-1575043694:200574..200683 | TCONS_00059677-exon-scaffold_330-1575043694:200574..200683 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_330 | supercontig | scaffold_330:199622..200683 + |
Blast
The following BLAST results are available for this feature:
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